CsaV3_5G038630 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGCGAAACTGTAACAAATTCTTCAGCATTAGACAAAGGAGAGTAGGAGACAGCCCCCACCCAGCAGCTTCCTCTTCAAAGATTATGATGAAAATTGGGGTAATCTAATTGGTTTTAGTTATTCCAAGGTTTCGACCCTCCTCCATCAGAAAGACTCATTTGGCCTCGTGAACATCCTTTGTGTGCTATTTCTGACAATTACCCAATAGTAGGTTCCAGCCGTATTCTTGGTAGTCATTGCTAGTCTACTAGATGCTATTTTTAGCCTCTGATGGTGCTCATGCTTTTGAAACTTTAAATCGTTTGCTTTTGAAAGTAATACACTGACTTGTTGTTCTTGAAACTTGAGATTTGCAATATTCTAGTTGCAATGTTTGTGCCATTCTTTTTCTCAACATTTACCGCATTATAATTTACATATTTCTTTGACCTAAATGCTCCATGAAATTGGCTGGATATTTGTTGTGTTTATGCATTGGCACACATAATTGTAATTTTTGGAAATAAGTAGGTTACTATGAGCTAAGAAGCATGGACACTTTAGTTTGGCTAGCATATCCAGTGTTGGACACTTGGTTACTTAAACACTTGTTGGACATGTCTTAGATACTTTTTAGTGCAAAATTGCATTAGATGTGTTTGACACTAGCTGTACACAGTCAAAGTAGGACAAACATTTGTTCGACATGCATCAAACACTTGAACAAGTATACTATGAGGACACATGTATAAAAACAATAATAAATATTGAGTGCGAAATACATCAAACTCTGCATCTTGTACCTGCATTTGTGCTAGTTAGTTTCTGAGCATGTTGAAACTAAGAAGTTGCAATATCTAGTATGATACTTTATTTATTAATCCTGTTCCTGCAGGCTTGATAAAGCAAAATTTTATGGCGTAGGAGCTGGCCTCTTCACTGGGATTACTGTTGCACTGTACCCTGTTTCTGTTGTGAAAACAAGGATGCAGGTCGCTGTAAAGGATTCTGCCGAGAGAAATGCCCTGTCTGTTATCAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTATAGAGGGTTTGGCACAGTAATCACTGGTGCAATTCCTGCAAGGATCATCTTTCTTACTGCTTTAGAGACTACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTTTGGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTCGTTCCAATTGATGTGGTATGTAGGACTGGTTTAGTTTTTGATAAAATATTGTTTTTGTTGATCTATTATCGCTTAAAAGCTTGAATATTTGATGTCACTCAGATTAGTCAAAAGCTAATGGTTCAAGGATACTCCGGAAATACAAGATATACTGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATTCGGGGACTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGGTGAGACGTGGTAATTTCCCTTCATTGTGTTGAAGTGTTGAGTTTGGGTCATTGCATAAGGACTGGTAATGGTTAGAATTTTCATCTTCACTTTCTTTGGTCCTGAATGAAATTCTTTTATTTTTTACTTTATTTATTTATTTTTTGTTTGGACAAGAAACAATGAATGAAAGAAATTATTAGTCTCTTGATGGTAAATAGTAATGTTTATGTCAACGAGGTACATTCTAAATAGATACTGCTATATTATTTATTGTTAATTACTTTGTCCTTTACTATATACCTTGGTTCTAGTCTCTTCTTGATTACTGTGTTTCGAATAATTCGCCTTCTGGGAGTTTAGGCACTGTAAAGGGCATCCATGTAGGGATTTGTTGAGCTTTATATATGAGTGCGAGCATAGCTATACTGGCAAAAAGATATAATATGGAATTTCAGAGGGTCCAACTGGACAGTTGTTATTTGCACAAATACATGATGCGGTTGCGGTGGTTTCTTCTGTTTAAATTGGTTTCTCTTTTTTGACGTTGGAATTGTTATATTTGTTTTGTGGCATTGAAGGTTCTTAGGTCAAAACTCTGCTTCAGAGAAATTTTCTCCCAGCCATTCCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTACTTACTAGGCCACCCCAGTTGACATCAAACCAGTCTTCTCACTGACTCATTGTACATTTGTTATTAGCTTTTATTTGATACCAAATATTATTTTCCGTTTCTACTGTCATAGAAGCTGTGTTATCAAACCATAATTGACAATTCTGCAAATGTTTGTTACATTATTTAAAGCTCTACTTGTCGACTCGAAAGGCTAGACCTTATGAGAGCCTCTGTTTACTGTCTGAAATTTTTATCAATAATGCCATGTTGGTCTAAGGTTTTTTTATTTGCCGAACAAAATGTTAGAAAGCTATCTTGGACACTCCCTGGAACTGGAAGCGTGGGTATGGGTTTGATTAAGACTTTTCAGTTGGAGAAGGTGCTTTTGCATTTTTCTTTTCGTGATAAATGAGGAATTCTTTGATAGGCCGTATTTTCTTACTGTTTGGACTTTGGAGGGTCTTTGGGATTGAGATGTGGAGTTCAACATATTTCAGTACCTTCCTTTTGGGTCTTTATAATAGGTCTTAGTCTCAATTTTATTTATCTATTATCAACAACGGAGGCATAAATTCAAGAGCTTCCCTATATCCCCCAATTCTCCTCAAAGACCAATACAAGATTAACTGCCAAAAAGATACCTCCCCTCCCCCCCACACCCACACCCCAACTAACAATATTCCCATATCCCACATTTACAGCTTCCTCTCTTCATCCCTTCTTGTGCTTACGAGTACACCCTTTCACTGAGGGGGGTTATCAGAGTACTCCCAAGTTTTTTTTTTCCCTGAATGTTTTCTTTGCTTAAAAACCTGAGTGGGTCTAATTTCGGGGGTTTCTTGGTGGCATGTGTTGTTCTTAGTTTACAAGCAGGCCTCTGTATTTACCAAAATTACTCTTGTTTGAAAACCTTTTCTCCACCCCAAACTTTCTTTCAAAAAAAAATTTCACAACTCTCCAGTTTCATGTGAAAAATCTTTACTTTTTTCATCAAAAAGCTTTGTAATTCCTTCTTGAGGTTGGTAGTCCCAAGAGCACCAGTCTTGAGGATAAGGGTTGGATTTTGAAACAATCTTTCTCAAGAGTTCCAAGGCATAGAAGCCTCTTTTTTCACCAATGTAACTAACCTCTCCTTGTTCTGAAGTTGCCGCCCTTGAACTCTTTGATCATTTGGCACTGCCAGTTTGCCACTAAAACTACTTGTCCAACTTAGAACTCCTCGCTCTACTTGCTAAAACCCCTATAAGGTTTACCACTGACCGAATTGGAAATGGCCGTCCTTAAATAAAAACAGGAAAAAGAGACTGTTCTTTAAATGGGAAAATTAATAGAATGGTTCCTATCCCCGAACCTAAAAGATCAGGTATTGGGGTTCATATTTTTCTCCAAACGACTTCTTGGGATATCAACCCAGCCTACAACAGGAAAGGGGGAAGAGACAAGTCACCTTGTCTAACACTTTATTTAGTGGCTCTGAAGAAAATCCAAACCAGCCCTTCTATACTTCGTAAAGTTTCCTGAGTAATTCATTAGTCTAGGAAGGTCAAGTCCCCACTATTATTTGACTATCTAAAATGCAAATTGTAGATGGCACCCACCTGCTTCGTTCATTCTGCAACAGTCTCATTGGAGCAGCGATATTTAAAATAAGAGGATTGGTGGGTTTGTTGATCATTGTGATTTGCCATGGTAATCTGTTTTTTATACTAATTGTTGTACTGAAGTTTGGGAAAGCATTGCCTTCACTGGTTGGTGTTGTACATGTAATCAGGCTAAAACTTGAAACTCTCGTGCAAGGTTCCAAATGTCAGTATCTAGCTTGGGCCTTGCTTGCTCAACCCCAAGACTATTTTGCTTTGATAAAGGCAAAGGCCCCTTGGGGTGAGGCAATTTTAGATGCAACAACCTCCCAAATTTTCAATATATGATCTTGTGAAGGCTGATAGATATCTGAGTTTCTTGACTACCAAGTATTTTTAGATTTGTAGTCAAAATGCACATAAGTGCTTGATCACTCACATATTTTTTTTTTTATAAATAGAACATCAAATAACCACAAATTCGAATTTCTGAAACCTTTTTTGTCTTTTTGAGATTTTTTAAATCATTATGGAAAGGTAGTATCTCATCATAGTACTACCTTAATTTCATCCATGTGACGAGTCATGACTTTCTGACTCAGGTTCTGTTGATGAGTTCTATGTTTTGATGAGTTGTGTTTGTTCATAGGTGATGGGCGATAAAGGGAAGACAGCTAGACAAATTGTTGAAAGCTTAATCGCTGAGGATGGGTGGAAAGGTTTTTATAGGGGGCTTGGTCCTCGGTTCTTCAGCATGTCTGCCTGGGGAACATCGATGATATTGGCCTACGAGTACTTGAGTAAGACTTCTTTAGCCTGCACTTTATTAATGATACAATTGAACACATGCATACGCACATATCTACACATATCTACGTTCAATTATAGACCATTTTTTATGTTGATGTCAACATCTTCAAAGCAGAAAATATTCATCTTTTATGGGAATCCTTATTGCGAATATGAATTATTGGGAACTTTTTAGAAGACATTGGGAACAAATAGTTAAAAAATCTAGAATTGTTAACTTTGTGAGATCCACCGTGTAAGAACTTAGTAAGCCATGAAATTTATGTTTTTTTAGTTGTGAGAAGCACATAAATCCTTGAGCCAAACCTCCTACTTATTGCACGTATATCAAAAATTTTCTTTTGAACTTTAAACGCATAGTTTCAAATCTCTCACTCGTTACTTTTTGCAGTTATTAGGATGTAATTTTCTTAAATCTACACACCATTTTACTTTAATCTCTGTTATATTTGTGAATAGTTTCCCCTTCTCATGCGATGTTGTTGTTCAAAATTTAGAGCGGTTGTGTGCAAAAGATGAACAGACTTGACCTCATCAAAGATTTTAGAGCGGAAGCAACTTGTCAACTCTTTTTGTCCTCAAAACAAGGCTAGAATTCACTTGAAGATAGGTTATTGCTGTTGAAGCATTTGTGTATTGACTACAGAGCAGAATTTCATTCCATCTGAAAACCACATTCATTTTTAGGGAGTTGATTTCGAATAGCCCCTGAATTTTTTAGACATATTTTAGTATATTTCATCACAATAAACTCAGTTCATCAAAAAAGAGAATGTAAGCTTAGTATTCTCACGTTGTATTTGAACTAACAAATATTATTCTTGATCAATCATTTCAGTACACTTACAAGGCTTTTGAAATTTAATATTTTGGTCTTTGAGTTT ATGCAGGTCGCTGTAAAGGATTCTGCCGAGAGAAATGCCCTGTCTGTTATCAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTATAGAGGGTTTGGCACAGTAATCACTGGTGCAATTCCTGCAAGGATCATCTTTCTTACTGCTTTAGAGACTACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTTTGGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTCGTTCCAATTGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCCGGAAATACAAGATATACTGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATTCGGGGACTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGGTTCTTAGGTCAAAACTCTGCTTCAGAGAAATTTTCTCCCAGCCATTCCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGCGATAAAGGGAAGACAGCTAGACAAATTGTTGAAAGCTTAATCGCTGAGGATGGGTGGAAAGGTTTTTATAGGGGGCTTGGTCCTCGGTTCTTCAGCATGTCTGCCTGGGGAACATCGATGATATTGGCCTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA ATGCAGGTCGCTGTAAAGGATTCTGCCGAGAGAAATGCCCTGTCTGTTATCAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTATAGAGGGTTTGGCACAGTAATCACTGGTGCAATTCCTGCAAGGATCATCTTTCTTACTGCTTTAGAGACTACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTTTGGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTCGTTCCAATTGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCCGGAAATACAAGATATACTGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATTCGGGGACTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGGTTCTTAGGTCAAAACTCTGCTTCAGAGAAATTTTCTCCCAGCCATTCCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGCGATAAAGGGAAGACAGCTAGACAAATTGTTGAAAGCTTAATCGCTGAGGATGGGTGGAAAGGTTTTTATAGGGGGCTTGGTCCTCGGTTCTTCAGCATGTCTGCCTGGGGAACATCGATGATATTGGCCTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA MQVAVKDSAERNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAALANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYTGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFSPSHSQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT* Homology
BLAST of CsaV3_5G038630 vs. NCBI nr
Match: XP_031741620.1 (solute carrier family 25 member 44 isoform X2 [Cucumis sativus]) HSP 1 Score: 534.3 bits (1375), Expect = 6.3e-148 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. NCBI nr
Match: XP_031741621.1 (solute carrier family 25 member 44 isoform X3 [Cucumis sativus] >KAE8648946.1 hypothetical protein Csa_009234 [Cucumis sativus]) HSP 1 Score: 534.3 bits (1375), Expect = 6.3e-148 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. NCBI nr
Match: XP_004141469.1 (solute carrier family 25 member 44 isoform X1 [Cucumis sativus]) HSP 1 Score: 534.3 bits (1375), Expect = 6.3e-148 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. NCBI nr
Match: XP_038891044.1 (solute carrier family 25 member 44 [Benincasa hispida]) HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145 Identity = 265/271 (97.79%), Postives = 269/271 (99.26%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. NCBI nr
Match: XP_008459395.1 (PREDICTED: solute carrier family 25 member 44 [Cucumis melo]) HSP 1 Score: 526.2 bits (1354), Expect = 1.7e-145 Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy Swiss-Prot
Match: Q8BGF9 (Solute carrier family 25 member 44 OS=Mus musculus OX=10090 GN=Slc25a44 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28 Identity = 95/286 (33.22%), Postives = 144/286 (50.35%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy Swiss-Prot
Match: Q5RD67 (Solute carrier family 25 member 44 OS=Pongo abelii OX=9601 GN=SLC25A44 PE=2 SV=2) HSP 1 Score: 125.9 bits (315), Expect = 6.8e-28 Identity = 94/286 (32.87%), Postives = 143/286 (50.00%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy Swiss-Prot
Match: Q96H78 (Solute carrier family 25 member 44 OS=Homo sapiens OX=9606 GN=SLC25A44 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 8.8e-28 Identity = 94/286 (32.87%), Postives = 143/286 (50.00%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy Swiss-Prot
Match: Q54VX4 (Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum OX=44689 GN=mcfJ PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.3e-26 Identity = 78/271 (28.78%), Postives = 126/271 (46.49%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy Swiss-Prot
Match: Q55E45 (Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum OX=44689 GN=mcfE PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25 Identity = 79/272 (29.04%), Postives = 134/272 (49.26%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy TrEMBL
Match: A0A0A0KUH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640580 PE=3 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 3.0e-148 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy TrEMBL
Match: A0A1S3CBA7 (solute carrier family 25 member 44 OS=Cucumis melo OX=3656 GN=LOC103498542 PE=3 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 8.3e-146 Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy TrEMBL
Match: A0A6J1JTL4 (solute carrier family 25 member 44-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487396 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 6.8e-140 Identity = 253/271 (93.36%), Postives = 263/271 (97.05%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy TrEMBL
Match: A0A6J1JSC2 (solute carrier family 25 member 44-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487396 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 6.8e-140 Identity = 253/271 (93.36%), Postives = 263/271 (97.05%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. ExPASy TrEMBL
Match: A0A6J1K2W2 (solute carrier family 25 member 44-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489574 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 6.8e-140 Identity = 252/271 (92.99%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. TAIR 10
Match: AT5G15640.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 425.2 bits (1092), Expect = 3.8e-119 Identity = 211/272 (77.57%), Postives = 242/272 (88.97%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. TAIR 10
Match: AT1G72820.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 232.3 bits (591), Expect = 4.8e-61 Identity = 118/271 (43.54%), Postives = 171/271 (63.10%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. TAIR 10
Match: AT5G26200.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 204.1 bits (518), Expect = 1.4e-52 Identity = 112/267 (41.95%), Postives = 160/267 (59.93%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. TAIR 10
Match: AT1G07030.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 102.4 bits (254), Expect = 5.7e-22 Identity = 63/232 (27.16%), Postives = 120/232 (51.72%), Query Frame = 0
BLAST of CsaV3_5G038630 vs. TAIR 10
Match: AT2G30160.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 102.1 bits (253), Expect = 7.4e-22 Identity = 67/251 (26.69%), Postives = 121/251 (48.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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