CsaV3_5G037940 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G037940
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Binding partner of ACD11 1-like
Location	chr5: 30068479 .. 30072332 (-)
RNA-Seq Expression	CsaV3_5G037940
Synteny	CsaV3_5G037940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAATTGAAATTGAGACATGTTATAGTTCATCTCCTTTAATTGAAATCTAATTTGGAGAATACCATTTTTGATTTGGGATGGATAAAGGTGACCTAATGTTGATGGTAGAGTGTTGGAAGTTGGAAGTATCCGTTACAAAAAACGGTGCCGTATGGTGTTGCACTAGTGTACGAGAGCTTAAAAGCTACAGAGTTTGATGACGGGGGGATTCTCTGCCAACAGAAAAACTCTCAACGAAGAAGATAAGACTTTATTCCAAAACTCTTACCTTCTTCAATCACTCTCCCCCACACGCTCCAATACTTCTTCTCCGTGCCTTACACGCTCCTTTCAATACCAATTTTCAGTACAAATCACCAACCAAATTGATACCAAAAACCAAAAAATGTCGGCTTAATTTTTCTGGTTTCAGCTCAGCACCCCCTTCCCCGGCCCCCTTCTTCTCTTCTTTTCTCTCTCTGAGCTTTCAAACAGGTACGCCATGACAGAACTTCCTATTGTTATTTTTTTTTTTTTACTTTTCTTTTATTTTTCATGTCTTTCGTGTCGATTTCTATGTTTCTATCTCTTCGTTTGATTGTTTTGGATGATGGGTTTGCTTTATGTTTCCCTTTCAAGATCTGGGTTGTGGATTAATTTTGGGAATTTCTTTAAATTTTTCATCTTTTTTTGTGTGTGTGTGTGTGTGTGTGATTGACTTGCTCTTGGTTTGAACTTCCTCCTTTTCTATATACCCTTTTGCTCAAATATTCTGGGAATCTCTCATTCTTTACTTTTTCTTCACTTTTCCCCAATGTTCATATTCTCTCCCTTTAACCACCCGCATTGTTCATGCTATAGAGACTTAGTTTTATAATGAATATATAACAGTTTACAATTTTGGGATAAGCCTGCTAGTGATAAATTATACCTTTGGACCATTAATTATAATTATGGATGTCAGAGTCATCATATACCAAGTTGGAACATTTTGGTTGGGGGTTAAAGGTGTTAAAAAAAGTTTTATGAATATGAAGTGTAGGGGTAGTTGATATTTCAGTTTTCTCTAAACAAACTGGTGGAACACCCCAGGTATTTTGCTCTAATTCAAGTTTTCAACATAGAAAGCTGTGTGAAACAATGTACAATGGGGGCTATACTGCTGAAGTTACAAGTTTGTCACCGAAAGCCACAGAGAATGATGTTTATGACTTTTTCTCTCATTGTGGCACGGTCGAGCACGTAGAAATCCTCAGGTGAATTAAACATAAATCCCTTGGCTTAATGGTTTATTACAATTTGTAAGCATACGTGTACCTATTACCATTAGCTTGTTATACATAAATCAAAAGTTTTGAAACAATTTGTCAAGGTATGCTAAAAACCTGTTTCAGTTTTATCAACTTCAACGAGATCTTACATAGGAACTTACTGGAGCTTCAAAAATCAATTAATAAACTTGGAAAATATGAATTTCATATTTGTTATTGCTGTTGCTGTTGTGATTAGTAATTAAAAGTGTTAGAAATAGTGAGATTAGGTCATGTTGAAAGCCTAAAGGTAGTTAATATTTACTTTGCCCTAAAAAGAAAATAATAGAAAATATCAGTATAGTGGATTTTCCCCCGTACCAGGGTTTCCATGTAAATCTGTGTTTGTTATACGTTTCTACTTTCAAGTGAACTTTTTGAAAATGTTATAGAGATAAACTAGACTGATGATGAGTCTGCCTTTGAAGTCTACATTGATTTTTTAGTGTGCTACTATTTTCAATTAGCTGTAAAACCAAGCTACTTGAAAATGTTTTTTCTTTCTTTTGCGATAACAGATCAGGCGATTATGCATGTACTGCTTACGTGACCTTTCGAGATGCTTTTGCTCTGGAAACTGCTATATTACTTAGTGTAAGTGCTTGAGGATTATTTGATTTTGGTTGACTTGAGATTCTTCTGTTCTCCTTCATTTTGAAATGGCTAGCTTCTCTCGTTTATACTTAATGTATCAATCATAGATTTTTGTAGAGTACTTTCCTTTTGTTTCTCCTCGCTTGTGTGCTTTGATGATGTATGTGAACACACAAATACACTCTTTAGGGTGAGTGGATGAGGAGGAGACAGCTTTGCAAAAGGTTGATGTGCACAATTGGAGAAATGGTTCGAATCCTAGGATTGGGACAATACAATTTCATCTTTAGAGTATCAATCTCTTGCTTTTAGATAAAGCTATGTACATGTCTCTTTGTTTCTTTCTTTTTCACAATGTTTCAGTTTCTCCAACTTACTCATTCACTTTCCATTTGTACTTTCAAGCATTCCCATGAGCCAGGACACTAGTGGATATTTGTTCTTGTAATTCTTCTGATTCAGTTCATCTTTTAATGATGTCAAATAAATATTTTTTAAGTTTGAGATGCTCTCTCCTTGCATCATAGGGGCATGGTTTGAACTCTCAATCCACATTTCACTTTTTTAGAAGAAAATTGAACAGTTGTGATCTCTCAAAACACATGCCTACGTGTACGTTGTAACCATTCAAATTAGTTATCTTCAAACATCCCTTTTAAGCTTTTATAACGAATTCATTTATTGATTTTTTCGTTCCAGGGAGCTGAAATCCTTGATCAATGTGTGTTCATATCCCGGTGGGGAGCATACATAGATGAATCAGACAGTTGGAACAGCCCTGCGCAAATGACCAACGACAATACAAGCTTAATGGTAAGCGTAAATGGATAGGTACACATTCTTTAAATGTATCAACATGTCGTAATGCATCCCAAACCTACTTGCTACATTTTGCTTGGTTGGTCTTCTGGCTTGTACTGATGCACACAATATTTTGAATTGATCTCCTTAAATTTCTCTTCATGGAAATCAGGCGACCAAAATAATGCATTCTGTTCACACACCAGGGGAAGCTGTTACCATGGCTCAACAAGTCGTAAAAACAATGCTATCAAAGGGATATGTGTTAACCAAAGATGCTCTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGAGCTTAGCAATAGGATTGGACTCACTGAGACAATTAATTCTGGCATGGAAACCGTTAAGTACATCGACGAGAAGTTTCACGTTTCCGATATCACTAGATCCGCTGCAGCAGTAACTGGAACAGCAGCTGTGGTGGCGGTGACTGTGACAGGGAAAGCAGCAATGGCAGCAGGGAATGCTGTTATAAACAGCAGCTACTTTTCTAAGGGCGCACTTTGGGTTTCGGATATGTTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGCAGGTAAGAGTATCAGTAAATGAAAGAAAAGAAGGGTAAAAAATTGAGTCAAACCAACAAAAAAATAACTATCATTCTTTATCCCCATCATGAGAATATAAATGTACTCAAGTTTTTTTCTTGTTTTTCACTCAAAATCAGAACCCTGATGTGCATTTTTGTATGGCTATGTATAAGTAATCATCACAATGCACTGTTGTTAACTTGTTTGGATAAATATGATAGATACAACGTTCAACATCTGAACGATTTGTTCTACTTTTATATTATGTTAAATTGGGAAAATGGAGAATTACATTCACAATATTTGGTAAAACTACATACATATGTAGCTCTAAACTCCTCTATTGGTCTACCTAAAATAGGTTACGTTTCAAATAAAAGTAGCTAACCGG

mRNA sequence

ATGTACAATGGGGGCTATACTGCTGAAGTTACAAGTTTGTCACCGAAAGCCACAGAGAATGATGTTTATGACTTTTTCTCTCATTGTGGCACGGTCGAGCACGTAGAAATCCTCAGATCAGGCGATTATGCATGTACTGCTTACGTGACCTTTCGAGATGCTTTTGCTCTGGAAACTGCTATATTACTTAGTGGAGCTGAAATCCTTGATCAATGTGTGTTCATATCCCGGTGGGGAGCATACATAGATGAATCAGACAGTTGGAACAGCCCTGCGCAAATGACCAACGACAATACAAGCTTAATGGCGACCAAAATAATGCATTCTGTTCACACACCAGGGGAAGCTGTTACCATGGCTCAACAAGTCGTAAAAACAATGCTATCAAAGGGATATGTGTTAACCAAAGATGCTCTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGAGCTTAGCAATAGGATTGGACTCACTGAGACAATTAATTCTGGCATGGAAACCGTTAAGTACATCGACGAGAAGTTTCACGTTTCCGATATCACTAGATCCGCTGCAGCAGTAACTGGAACAGCAGCTGTGGTGGCGGTGACTGTGACAGGGAAAGCAGCAATGGCAGCAGGGAATGCTGTTATAAACAGCAGCTACTTTTCTAAGGGCGCACTTTGGGTTTCGGATATGTTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGCAGGTAAGAGTATCAGTAAATGA

Coding sequence (CDS)

ATGTACAATGGGGGCTATACTGCTGAAGTTACAAGTTTGTCACCGAAAGCCACAGAGAATGATGTTTATGACTTTTTCTCTCATTGTGGCACGGTCGAGCACGTAGAAATCCTCAGATCAGGCGATTATGCATGTACTGCTTACGTGACCTTTCGAGATGCTTTTGCTCTGGAAACTGCTATATTACTTAGTGGAGCTGAAATCCTTGATCAATGTGTGTTCATATCCCGGTGGGGAGCATACATAGATGAATCAGACAGTTGGAACAGCCCTGCGCAAATGACCAACGACAATACAAGCTTAATGGCGACCAAAATAATGCATTCTGTTCACACACCAGGGGAAGCTGTTACCATGGCTCAACAAGTCGTAAAAACAATGCTATCAAAGGGATATGTGTTAACCAAAGATGCTCTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGAGCTTAGCAATAGGATTGGACTCACTGAGACAATTAATTCTGGCATGGAAACCGTTAAGTACATCGACGAGAAGTTTCACGTTTCCGATATCACTAGATCCGCTGCAGCAGTAACTGGAACAGCAGCTGTGGTGGCGGTGACTGTGACAGGGAAAGCAGCAATGGCAGCAGGGAATGCTGTTATAAACAGCAGCTACTTTTCTAAGGGCGCACTTTGGGTTTCGGATATGTTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGCAGGTAAGAGTATCAGTAAATGA

Protein sequence

MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK*

Homology

[Close]

BLAST of CsaV3_5G037940 vs. NCBI nr
Match: XP_004148690.1 (binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ACD11 1 [Cucumis sativus] >KAE8648916.1 hypothetical protein Csa_009005 [Cucumis sativus])

HSP 1 Score: 484.6 bits (1246), Expect = 5.4e-133
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEAGKSISK 255
           AAKAAAEAGKSISK
Sbjct: 241 AAKAAAEAGKSISK 254

[Close]

BLAST of CsaV3_5G037940 vs. NCBI nr
Match: KAA0039508.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 475.7 bits (1223), Expect = 2.5e-130
Identity = 248/254 (97.64%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGAYIDESD+WNSPAQMTNDNTSLM T+IMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIN+GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEAGKSISK 255
           AAKAAAEAGK+ SK
Sbjct: 241 AAKAAAEAGKNSSK 254

[Close]

BLAST of CsaV3_5G037940 vs. NCBI nr
Match: TYK15262.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 471.1 bits (1211), Expect = 6.1e-129
Identity = 245/249 (98.39%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGAYIDESD+WNSPAQMTNDNTSLM T+IMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIN+GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEAG 250
           AAKAAAEAG
Sbjct: 241 AAKAAAEAG 249

[Close]

BLAST of CsaV3_5G037940 vs. NCBI nr
Match: XP_038890704.1 (binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner of ACD11 1 [Benincasa hispida] >XP_038890706.1 binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 452.2 bits (1162), Expect = 2.9e-123
Identity = 236/254 (92.91%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY+ GYTAEVTSLSPKATENDVYDFFSHCG VEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSEGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG YIDESD+WNS + +TNDNTSLM T+IMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTWNSHSHITNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETI++GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIHAGMETVK 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYF+KGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFAKGALWVSDMLSR 240

Query: 241 AAKAAAEAGKSISK 255
           AAKAAAE G + SK
Sbjct: 241 AAKAAAEVGNNNSK 254

[Close]

BLAST of CsaV3_5G037940 vs. NCBI nr
Match: XP_022134513.1 (binding partner of ACD11 1 [Momordica charantia])

HSP 1 Score: 436.0 bits (1120), Expect = 2.2e-118
Identity = 228/254 (89.76%), Postives = 242/254 (95.28%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY GGYTAEVTSLSPKATE DVYDFFSHCG VEHVEILRSG+YACTAYVTFRDAFALETA
Sbjct: 1   MYPGGYTAEVTSLSPKATEQDVYDFFSHCGAVEHVEILRSGEYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG YIDESD+ NSP++ T+DNTSLM T+IMHSV+TPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTSNSPSRTTDDNTSLMVTQIMHSVYTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTE I++GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEKIHAGMETVK 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVT+TGKAAMAAGNA++NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTMTGKAAMAAGNAMVNSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEAGKSISK 255
           AA AAA+ GK+ SK
Sbjct: 241 AANAAADVGKNTSK 254

[Close]

BLAST of CsaV3_5G037940 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-25
Identity = 85/248 (34.27%), Postives = 136/248 (54.84%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           + +V +LS  ATE+D+ +FFS  G VE ++I +S ++  +AYVTF++    ETA+LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  EILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKT 126
            I DQ V        I+ + +++ PA    +  S  A  +          V  A+ VV +
Sbjct: 67  SIADQSVI-------IELAPNYSPPAAPHAETQSSGAESV----------VQKAEDVVSS 126

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETVKYI 186
           ML+KG++L KDA+ KAKAFD+    ++TA A V  L  +IGL++ + +G     E +K +
Sbjct: 127 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 186

Query: 187 DEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAA 246
           D+ F V++ T+S  A              +   +AG+AV+ + Y   G  W +   +R A
Sbjct: 187 DQNFQVTERTKSVYA-----------AAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 223

Query: 247 KAAAEAGK 251
           +AA E G+
Sbjct: 247 QAAGEVGQ 223

[Close]

BLAST of CsaV3_5G037940 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 62/230 (26.96%), Postives = 98/230 (42.61%), Query Frame = 0


Query: 10  VTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEIL 69
           VT++SP+ TE  + DFFS CG V ++   +SG+   TA + F    A +TA+LL  A + 
Sbjct: 7   VTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDALLG 66

Query: 70  DQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKTMLS 129
              + I+          S +  A  T D       +       P  A      ++  +LS
Sbjct: 67  QNKIQIT----------SEDGGAASTTDQGGAGGDQAARQEDKPRSA------IISELLS 126

Query: 130 KGYVLTKDALVKAKAFDDSCQVSA-------TAAAKVYELSNRIGLTETINSGMETVKYI 189
           +GY L+   L K+   D S  VS+       +A + V  ++ R  +TE  N        +
Sbjct: 127 RGYHLSDVTLEKSIQLDQSYGVSSKFKGILESALSGVRSVNERYHVTEKANE-------V 186

Query: 190 DEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGAL 233
           D KF +SD     +++  T    A+     A  +AG  V N+    K  L
Sbjct: 187 DNKFAISDKLNRTSSLVSTYFHKALETA--AGTSAGQKVQNAYEDGKNQL 210

[Close]

BLAST of CsaV3_5G037940 vs. ExPASy TrEMBL
Match: A0A0A0KS66 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.6e-133
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 120 MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 179

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA
Sbjct: 180 ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 239

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK
Sbjct: 240 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 299

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 300 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 359

Query: 241 AAKAAAEAGKSISK 255
           AAKAAAEAGKSISK
Sbjct: 360 AAKAAAEAGKSISK 373

[Close]

BLAST of CsaV3_5G037940 vs. ExPASy TrEMBL
Match: A0A5A7T9G0 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003300 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.2e-130
Identity = 248/254 (97.64%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGAYIDESD+WNSPAQMTNDNTSLM T+IMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIN+GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEAGKSISK 255
           AAKAAAEAGK+ SK
Sbjct: 241 AAKAAAEAGKNSSK 254

[Close]

BLAST of CsaV3_5G037940 vs. ExPASy TrEMBL
Match: A0A5D3CUV4 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00390 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.0e-129
Identity = 245/249 (98.39%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWGAYIDESD+WNSPAQMTNDNTSLM T+IMHSVHTPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDNTSLMVTEIMHSVHTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETIN+GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINAGMETVK 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEAG 250
           AAKAAAEAG
Sbjct: 241 AAKAAAEAG 249

[Close]

BLAST of CsaV3_5G037940 vs. ExPASy TrEMBL
Match: A0A6J1C268 (binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118
Identity = 228/254 (89.76%), Postives = 242/254 (95.28%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY GGYTAEVTSLSPKATE DVYDFFSHCG VEHVEILRSG+YACTAYVTFRDAFALETA
Sbjct: 1   MYPGGYTAEVTSLSPKATEQDVYDFFSHCGAVEHVEILRSGEYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFISRWG YIDESD+ NSP++ T+DNTSLM T+IMHSV+TPGEAVTMA
Sbjct: 61  ILLSGAEILDQCVFISRWGTYIDESDTSNSPSRTTDDNTSLMVTQIMHSVYTPGEAVTMA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV ELSNRIGLTE I++GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEKIHAGMETVK 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEKFHVSDITRSAAAVTGTAAVVAVT+TGKAAMAAGNA++NSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTMTGKAAMAAGNAMVNSSYFSKGALWVSDMLSR 240

Query: 241 AAKAAAEAGKSISK 255
           AA AAA+ GK+ SK
Sbjct: 241 AANAAADVGKNTSK 254

[Close]

BLAST of CsaV3_5G037940 vs. ExPASy TrEMBL
Match: A0A6J1JU47 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487859 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113
Identity = 217/254 (85.43%), Postives = 233/254 (91.73%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY+GGY AEVTSLSPKATENDVYDFFSHCG V+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 54  MYSGGYAAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 113

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           ILLSGAEILDQCVFI RWG Y DES +WNSP+QMTNDNTS M  +IMHS +TPGEAVT+A
Sbjct: 114 ILLSGAEILDQCVFIGRWGTYTDESYNWNSPSQMTNDNTSPMVAEIMHSAYTPGEAVTVA 173

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKV ELSNRIGLT+ I++GMETVK
Sbjct: 174 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 233

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
           YIDEK+HVSDITRS A VTGTAAVVA+ V GKAAMAAG AV+NSSYFSKGALWVS+MLSR
Sbjct: 234 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSNMLSR 293

Query: 241 AAKAAAEAGKSISK 255
           A+KAAAE G   SK
Sbjct: 294 ASKAAAEVGTRNSK 307

[Close]

BLAST of CsaV3_5G037940 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 250.4 bits (638), Expect = 1.6e-66
Identity = 140/249 (56.22%), Postives = 179/249 (71.89%), Query Frame = 0


Query: 1   MYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY  GY A+VT+LSP+ATE DV+ FFSHCG VE VEI      A TAYVTFRDA+AL+ A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 61  ILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMA 120
           +LLSGA I+DQ V+IS +G Y+ ES++         ++ S+  T+      +PGEA+T+A
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHESNNLRQ-----EEDYSVTVTRSDAFASSPGEAITVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVK 180
           QQVV+TML+KGYVL+KDA+ KAKA D+S + S+  A K+ E+S+ +GLT+ I S ME V+
Sbjct: 121 QQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVR 180

Query: 181 YIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSR 240
             DEK+H SD T+SA  VTGTAAV A T+TGK A AA  +V+NS YF+ GALW SD L R
Sbjct: 181 SADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGR 240

Query: 241 AAKAAAEAG 250
           AAKAAA  G
Sbjct: 241 AAKAAAHIG 244

[Close]

BLAST of CsaV3_5G037940 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-59
Identity = 126/245 (51.43%), Postives = 166/245 (67.76%), Query Frame = 0


Query: 5   GYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLS 64
           GY  EVT LSP  T ND+ DFFS  GT++ ++I+RSG+ ACTAYV F+D+++ ETA+LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 65  GAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVV 124
           GA ILDQ V I+RWG + +E D WN+ ++   D +         S    GEAVT AQ+VV
Sbjct: 66  GATILDQRVCITRWGQHHEEFDFWNATSRGFEDESD-SQHYAQRSEFNAGEAVTKAQEVV 125

Query: 125 KTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGMETVKYIDE 184
           K ML+ G+VL KDAL KAKAFD+S  VSA A A+V +L  RIGLT+ I +G+E V+  D+
Sbjct: 126 KIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTDQ 185

Query: 185 KFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKA 244
           ++HVSD  +S           AV  TG+ A AA  +V+NSSYFS GALW+S  L RAAKA
Sbjct: 186 RYHVSDTAKS-----------AVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKA 238

Query: 245 AAEAG 250
           A++ G
Sbjct: 246 ASDLG 238

[Close]

BLAST of CsaV3_5G037940 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-31
Identity = 89/248 (35.89%), Postives = 137/248 (55.24%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           T +V+++S +ATE D+ +FFS  G + ++E     D +  AYVTF+D    ETA+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  EILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAVTMAQQVVKT 126
            I+D  V ++    Y    D+  S   +   N S   T+   SV         A+ VV  
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSV------FRKAEDVVSG 124

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSG----METVKYI 186
           M+SKG+VL KDA+ KAK+ D+  Q+++TA+A+V     RIG TE IN+G     E VK +
Sbjct: 125 MISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEV 184

Query: 187 DEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAA 246
           D+KF V++ T+S           A+    +    AG+A++ + Y   GA WV+   +R +
Sbjct: 185 DQKFQVTEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVS 235

Query: 247 KAAAEAGK 251
           KAA E G+
Sbjct: 245 KAAEEVGQ 235

[Close]

BLAST of CsaV3_5G037940 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29
Identity = 89/250 (35.60%), Postives = 133/250 (53.20%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           + +V ++S  ATE ++++FFS  G +EH+EI +    +  A+VTF D  ALE A+LLSGA
Sbjct: 6   SVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSGA 65

Query: 67  EILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEA---VTMAQQV 126
            I+DQ V I+R   Y+   ++             L  +      +  G +   V+ AQ V
Sbjct: 66  TIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKAQDV 125

Query: 127 VKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETV 186
           V T+L+KG  L +DA+ KAKAFD+  Q+ A A+AKV     R+GLTE ++ G+    E V
Sbjct: 126 VATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAVNEKV 185

Query: 187 KYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLS 246
           K +D+K  VSD T           + A+    +     G+AV +S Y + GA W S   S
Sbjct: 186 KSVDQKLQVSDKT-----------MAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFS 244

Query: 247 RAAKAAAEAG 250
           + A+    AG
Sbjct: 246 KVARVGQVAG 244

[Close]

BLAST of CsaV3_5G037940 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-29
Identity = 84/249 (33.73%), Postives = 138/249 (55.42%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           T +V+++S  AT+ D+ +FFS  G + ++E     +    AYVTF+D    ETA+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  EILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMATKIMHSVHTPGEAV-TMAQQVVK 126
            I+D  V +S    Y           Q++ +  + +  K  +     G++V   A+ VV 
Sbjct: 65  TIVDSSVIVSMAPDY-----------QLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVS 124

Query: 127 TMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELSNRIGLTETINSGM----ETVKY 186
           +ML+KG++L KDA+ KAK+ D+  Q+++TA+AKV     +IG T+ IN+G     E V+ 
Sbjct: 125 SMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVRE 184

Query: 187 IDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRA 246
           +D+K+ VS+ T+S           A+    +    AG+A++ + Y   GA WV+   ++ 
Sbjct: 185 VDQKYQVSEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKV 231

Query: 247 AKAAAEAGK 251
           AKAA E G+
Sbjct: 245 AKAAEEVGQ 231

The following BLAST results are available for this feature:

BLAST of CsaV3_5G037940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148690.1	5.4e-133	100.00	binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ...	[more]
KAA0039508.1	2.5e-130	97.64	binding partner of ACD11 1-like [Cucumis melo var. makuwa]	[more]
TYK15262.1	6.1e-129	98.39	binding partner of ACD11 1-like [Cucumis melo var. makuwa]	[more]
XP_038890704.1	2.9e-123	92.91	binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner o...	[more]
XP_022134513.1	2.2e-118	89.76	binding partner of ACD11 1 [Momordica charantia]	[more]

BLAST of CsaV3_5G037940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	2.3e-25	34.27	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	1.2e-05	26.96	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of CsaV3_5G037940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS66	2.6e-133	100.00	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV...	[more]
A0A5A7T9G0	1.2e-130	97.64	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CUV4	3.0e-129	98.39	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1C268	1.1e-118	89.76	binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 S...	[more]
A0A6J1JU47	3.0e-113	85.43	binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CsaV3_5G037940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01210.1	1.6e-66	56.22	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G14340.1	2.4e-59	51.43	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.8e-31	35.89	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G32450.1	1.2e-29	35.60	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	2.6e-29	33.73	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..76 e-value: 5.9E-7 score: 39.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..70 e-value: 7.7E-8 score: 32.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..80 score: 9.285698
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..80 e-value: 1.3E-9 score: 40.1
None	No IPR available	PANTHER	PTHR32343:SF16	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..254
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..254
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 9..76 e-value: 1.00485E-33 score: 114.85
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G037940.1	CsaV3_5G037940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding