CsaV3_5G037430 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G037430
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr5: 29680577 .. 29680729 (-)
RNA-Seq Expression	CsaV3_5G037430
Synteny	CsaV3_5G037430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCAAGGGGCCAAACCCAAAAAAAGGGGAAAAGGAAAGAAAACTTTTGACTCCATCAATTGGGCAAAATCAGAGAAGATAAATTCACCCTTCTTTGTTTGTCACTTTCATGGAGTATTGGGACCTGGAAACACTTTGATAAAGCAAATACAG

mRNA sequence

GGCCAAGGGGCCAAACCCAAAAAAAGGGGAAAAGGAAAGAAAACTTTTGACTCCATCAATTGGGCAAAATCAGAGAAGATAAATTCACCCTTCTTTGTTTGTCACTTTCATGGAGTATTGGGACCTGGAAACACTTTGATAAAGCAAATACAG

Coding sequence (CDS)

GGCCAAGGGGCCAAACCCAAAAAAAGGGGAAAAGGAAAGAAAACTTTTGACTCCATCAATTGGGCAAAATCAGAGAAGATAAATTCACCCTTCTTTGTTTGTCACTTTCATGGAGTATTGGGACCTGGAAACACTTTGATAAAGCAAATACAG

Protein sequence

GQGAKPKKRGKGKKTFDSINWAKSEKINSPFFVCHFHGVLGPGNTLIKQIQ

Homology

[Close]

BLAST of CsaV3_5G037430 vs. NCBI nr
Match: KAE8648899.1 (hypothetical protein Csa_008136, partial [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 2.5e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  GQGAKPKKRGKGKKTFDSINWAKSEKINSPFFVCHFHGVLGPGNTLIKQIQ 52
          GQGAKPKKRGKGKKTFDSINWAKSEKINSPFFVCHFHGVLGPGNTLIKQIQ
Sbjct: 1  GQGAKPKKRGKGKKTFDSINWAKSEKINSPFFVCHFHGVLGPGNTLIKQIQ 51

[Close]

BLAST of CsaV3_5G037430 vs. ExPASy TrEMBL
Match: A0A0A0KS24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G631490 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  GQGAKPKKRGKGKKTFDSINWAKSEKINSPFFVCHFHGVLGPGNTLIKQIQ 52
          GQGAKPKKRGKGKKTFDSINWAKSEKINSPFFVCHFHGVLGPGNTLIKQIQ
Sbjct: 24 GQGAKPKKRGKGKKTFDSINWAKSEKINSPFFVCHFHGVLGPGNTLIKQIQ 74

The following BLAST results are available for this feature:

BLAST of CsaV3_5G037430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648899.1	2.5e-21	100.00	hypothetical protein Csa_008136, partial [Cucumis sativus]	[more]

BLAST of CsaV3_5G037430 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G037430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS24	1.2e-21	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G631490 PE=4 SV=1	[more]

BLAST of CsaV3_5G037430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G037430.1	CsaV3_5G037430.1	mRNA