CsaV3_5G036570 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G036570
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Annexin
Location	chr5: 28796578 .. 28797940 (-)
RNA-Seq Expression	CsaV3_5G036570
Synteny	CsaV3_5G036570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGAAAAGATATAGGTGGCAGCAGGAAATTGGATTAAATGATAATAAATCCTAAGCAGAATAAGCAGGTGAGATTACCAACTCTTAAACAAACCTTTAATTTAAAGGCCTTTGAGAGGTTAAAAAATCATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGTATCTTCACTCGTTCCTTTTCTTCCTTTTTGGGTCATTTTCAACATGTGGGAGTTAAGTTACGCTTGTTTTGCACGACCTCTTTTGAAGGACATCGCAGTTTTGTTCTGTCATACTACACCTGTTAATTTGTACATAAAATTCTAATACAAGAGGTAAGGAAACAGTATGTAAGAGCATTTCCATATTTTCATTATGCAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGAAAGTATGCTCAATCTTATAATGCAATGGAATAAAAACACATGTAGTAACCTTAAGCTTTATCGTAGTTTCATTTTAGAAGTTTATAAATGATCAGAAGGCTTCAAGCTGAGAGTCAAGAAGATCTATGAAGAAAACAATAATTTGTTTAGGGGGAAAATAAAAGAGAGAGTGAGCTCTCTATACTACTCATGCAATGTACTACTGTTATGTTCAAGGTGACGTGGTTGATCATGCAATGTAGGAATAGAACAAACTATGTTGAGTCCAGTGTGTATTTTGGTCCAAAATATATTCACATTACCTTCACTACAGATCCTGCGCATCTCCAATTTACACTTGCTTATGACAGCTTTTACTTGCCCCTTGTAACTGGAATTTAATCACAATTTGGGAGCCAATTGTAGAAGCACTTTTTTTTTTTTTTGTCTTGCGAAAGTAATGATCATTATAGACTTAAAATAACTGAATAAATGATTTTATATATTACAAAAAAGTAAAGAAAAGCTAAAGCAAAACAAGCTATCAATGACAACAAACTAAAAAGAAACTAAGAGAAAGTAACTTGTCAA

mRNA sequence

ATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGA

Coding sequence (CDS)

ATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGA

Protein sequence

MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP*

Homology

[Close]

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: KAE8648861.1 (hypothetical protein Csa_008879 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 7.1e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFG 60
           MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFG
Sbjct: 1   MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFG 60

Query: 61  MKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIP 120
           MKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIP
Sbjct: 61  MKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIP 120

Query: 121 FYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP 154
           FYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP
Sbjct: 121 FYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP 153

[Close]

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: ADN34202.1 (annexin [Cucumis melo subsp. melo])

HSP 1 Score: 88.2 bits (217), Expect = 6.8e-14
Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 59  FGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLP 118
           F M+T   I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL 
Sbjct: 377 FAMRTA-GIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLH 436

Query: 119 DHIPFYKKPIFKTIP-RQPIIKKPFP-KPYRPPVLPSHP 154
            H P+YKKP  K IP + P +KKP P  P+    +P HP
Sbjct: 437 HHKPYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 474

[Close]

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: KAA0034746.1 (annexin [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 6.8e-14
Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 59  FGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLP 118
           F M+T   I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL 
Sbjct: 387 FAMRTA-GIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLH 446

Query: 119 DHIPFYKKPIFKTIP-RQPIIKKPFP-KPYRPPVLPSHP 154
            H P+YKKP  K IP + P +KKP P  P+    +P HP
Sbjct: 447 HHKPYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 484

[Close]

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: XP_022138883.1 (uncharacterized protein LOC111009954 [Momordica charantia])

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13
Identity = 60/126 (47.62%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 39  SEPISTSNSEFGSPIFYLSTFGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGA 98
           S+PI+ + S        L +F MK T  I + I LSL LL+N C AAE+N   F P Q A
Sbjct: 9   SKPITKAFSAKALLKQILLSFSMK-TFFISLGILLSLLLLVNVCNAAEKNVAEFQPGQDA 68

Query: 99  -GITKNGEEAKEEKFKFLPDH-IPFYKKPIF---------KTIPRQPIIKKPFPKPYRPP 154
             ITKNGE  + EKF+FL  H  P YKKP F         K IP  PI+KKP PKP+ PP
Sbjct: 69  DDITKNGEAVQGEKFRFLSHHNKPHYKKPFFQQIPHPIVKKPIPHHPILKKPLPKPHFPP 128

[Close]

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: XP_008446928.1 (PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo] >TYK09299.1 annexin [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13
Identity = 51/94 (54.26%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 64  TISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLPDHIPF 123
           T  I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL  H P+
Sbjct: 3   TAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPY 62

Query: 124 YKKPIFKTIP-RQPIIKKPFP-KPYRPPVLPSHP 154
           YKKP  K IP + P +KKP P  P+    +P HP
Sbjct: 63  YKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 96

[Close]

BLAST of CsaV3_5G036570 vs. ExPASy TrEMBL
Match: A0A0A0KRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.5e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 69  MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK 128
           MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK
Sbjct: 1   MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK 60

Query: 129 TIPRQPIIKKPFPKPYRPPVLPSHP 154
           TIPRQPIIKKPFPKPYRPPVLPSHP
Sbjct: 61  TIPRQPIIKKPFPKPYRPPVLPSHP 85

[Close]

BLAST of CsaV3_5G036570 vs. ExPASy TrEMBL
Match: A0A5A7SY00 (Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007700 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.3e-14
Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 59  FGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLP 118
           F M+T   I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL 
Sbjct: 387 FAMRTA-GIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLH 446

Query: 119 DHIPFYKKPIFKTIP-RQPIIKKPFP-KPYRPPVLPSHP 154
            H P+YKKP  K IP + P +KKP P  P+    +P HP
Sbjct: 447 HHKPYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 484

[Close]

BLAST of CsaV3_5G036570 vs. ExPASy TrEMBL
Match: E5GCK5 (Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.3e-14
Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 59  FGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLP 118
           F M+T   I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL 
Sbjct: 377 FAMRTA-GIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLH 436

Query: 119 DHIPFYKKPIFKTIP-RQPIIKKPFP-KPYRPPVLPSHP 154
            H P+YKKP  K IP + P +KKP P  P+    +P HP
Sbjct: 437 HHKPYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 474

[Close]

BLAST of CsaV3_5G036570 vs. ExPASy TrEMBL
Match: A0A5D3CG71 (Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002960 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.6e-14
Identity = 51/94 (54.26%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 64  TISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLPDHIPF 123
           T  I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL  H P+
Sbjct: 3   TAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPY 62

Query: 124 YKKPIFKTIP-RQPIIKKPFP-KPYRPPVLPSHP 154
           YKKP  K IP + P +KKP P  P+    +P HP
Sbjct: 63  YKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 96

[Close]

BLAST of CsaV3_5G036570 vs. ExPASy TrEMBL
Match: A0A6J1CED0 (uncharacterized protein LOC111009954 OS=Momordica charantia OX=3673 GN=LOC111009954 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.6e-14
Identity = 60/126 (47.62%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 39  SEPISTSNSEFGSPIFYLSTFGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGA 98
           S+PI+ + S        L +F MK T  I + I LSL LL+N C AAE+N   F P Q A
Sbjct: 9   SKPITKAFSAKALLKQILLSFSMK-TFFISLGILLSLLLLVNVCNAAEKNVAEFQPGQDA 68

Query: 99  -GITKNGEEAKEEKFKFLPDH-IPFYKKPIF---------KTIPRQPIIKKPFPKPYRPP 154
             ITKNGE  + EKF+FL  H  P YKKP F         K IP  PI+KKP PKP+ PP
Sbjct: 69  DDITKNGEAVQGEKFRFLSHHNKPHYKKPFFQQIPHPIVKKPIPHHPILKKPLPKPHFPP 128

The following BLAST results are available for this feature:

BLAST of CsaV3_5G036570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648861.1	7.1e-80	100.00	hypothetical protein Csa_008879 [Cucumis sativus]	[more]
ADN34202.1	6.8e-14	53.54	annexin [Cucumis melo subsp. melo]	[more]
KAA0034746.1	6.8e-14	53.54	annexin [Cucumis melo var. makuwa]	[more]
XP_022138883.1	1.2e-13	47.62	uncharacterized protein LOC111009954 [Momordica charantia]	[more]
XP_008446928.1	1.2e-13	54.26	PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo] >TYK...	[more]

BLAST of CsaV3_5G036570 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G036570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRM7	4.5e-40	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1	[more]
A0A5A7SY00	3.3e-14	53.54	Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007700 PE=3 S...	[more]
E5GCK5	3.3e-14	53.54	Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A5D3CG71	5.6e-14	54.26	Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002960 PE=4 ...	[more]
A0A6J1CED0	5.6e-14	47.62	uncharacterized protein LOC111009954 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of CsaV3_5G036570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G036570.1	CsaV3_5G036570.1	mRNA