CsaV3_5G035790 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G035790
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	cyclin-dependent protein kinase inhibitor SMR1-like
Location	chr5: 28331239 .. 28332506 (+)
RNA-Seq Expression	CsaV3_5G035790
Synteny	CsaV3_5G035790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTGTAAATAGTATTAGTGATAATAATAATAAATACATATAAACACACACACACACACACTCAATCCCCATCATCAGATTCTTTTCCCCCTTAGCTTGTGGGAATAAGAGGAATAAAGACACCCCCTCTCTCCTTCTTAATTATCTTCTAATGCACGCCACTCTCTTCAACTCCCATTTTTTTTTACTCTAAAAAACAAAACAAAAGCAATCAAAAGTAAAAATAAAATACAAATACAAATACAAATTTTATTTTATTTTAGTTTTTATCTGCCCACATAAATACCCACTCCTCTCATCCCCAAACAAACATTATTCTTCATTTTCCACCCAAATCCATCCTCTCTCTTCTTCTTCTTCCATTCTTCTATTTAATTCAAGATGTCCACAGAACTCGATCTCCGACGGACATTGTTGGAGATCGTCCGTCGTCCGCCGATCAAGCTTCAAATTCCACCGCCGACGACGTCGACGTCAGTAATGGCGGGCGGCGATCACGGGGGGGTGATAATTCAGAAAGATCGAGTAGACGAGGAGGACGGGGGAGCGGAAGAATTGAGTTGCCGTACACCGACGTCGGCGGAGAACAAGATTCCGGCGGTGGAACAATGTCCGCCGGCGCCACGGAAGCGGAAGAGACCGCCGAGTTGTAGAAGGAGATTAATGGAGCTTGAATTTGTGGAGATCGTGCATAGAGATGAAATTGAACCGTATTTAAATTCGAGTTTTGATCATGAAGACAGAGTAAGAAAATCTGCTAAACGAAGCTTCTGCGAGTGTAAATGAAATTGTTCGATGCATTATTACTTTTTCACTAAATCGCCATTGTTAACCTTCTTCTTCTTACTTTTCTTTCTTTTTGACTTCTTCTTCTTACACCTTGAATTAATTAATGTACAATTTTCCTCTCAAGCTAATTATGTAAAACGAATTATCATTACTACACGTTTTTACGTTGGATTTATGTAAATTGAATTTAATTTCAGATCCAATTTGGAAGTTAATTCAATGAAATGAATTAACAGTTGAGAATTTCAGGGAATTGTGTTGAAATTGTTGGTTTTGAGGTAAGATCAGTGAAAGACAAATGAAGAAGGTATTTTATTTGTTTGTTTGTTTTCTTTTGTAAGGTTAAGATTAAGACAGAAGAGACTATGAATAAGTAAAAACGTAATTTATTCTACAAAAAAATAGCATCCTAAGTAGCAATAACCCTAATTTATAACGTGACCATTTATTTCAATTTATTTATAAAAAAAAAACACTA

mRNA sequence

ATGTCCACAGAACTCGATCTCCGACGGACATTGTTGGAGATCGTCCGTCGTCCGCCGATCAAGCTTCAAATTCCACCGCCGACGACGTCGACGTCAGTAATGGCGGGCGGCGATCACGGGGGGGTGATAATTCAGAAAGATCGAGTAGACGAGGAGGACGGGGGAGCGGAAGAATTGAGTTGCCGTACACCGACGTCGGCGGAGAACAAGATTCCGGCGGTGGAACAATGTCCGCCGGCGCCACGGAAGCGGAAGAGACCGCCGAGTTGTAGAAGGAGATTAATGGAGCTTGAATTTGTGGAGATCGTGCATAGAGATGAAATTGAACCGTATTTAAATTCGAGTTTTGATCATGAAGACAGAGTAAGAAAATCTGCTAAACGAAGCTTCTGCGAGTGTAAATGA

Coding sequence (CDS)

ATGTCCACAGAACTCGATCTCCGACGGACATTGTTGGAGATCGTCCGTCGTCCGCCGATCAAGCTTCAAATTCCACCGCCGACGACGTCGACGTCAGTAATGGCGGGCGGCGATCACGGGGGGGTGATAATTCAGAAAGATCGAGTAGACGAGGAGGACGGGGGAGCGGAAGAATTGAGTTGCCGTACACCGACGTCGGCGGAGAACAAGATTCCGGCGGTGGAACAATGTCCGCCGGCGCCACGGAAGCGGAAGAGACCGCCGAGTTGTAGAAGGAGATTAATGGAGCTTGAATTTGTGGAGATCGTGCATAGAGATGAAATTGAACCGTATTTAAATTCGAGTTTTGATCATGAAGACAGAGTAAGAAAATCTGCTAAACGAAGCTTCTGCGAGTGTAAATGA

Protein sequence

MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELSCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHEDRVRKSAKRSFCECK*

Homology

[Close]

BLAST of CsaV3_5G035790 vs. NCBI nr
Match: XP_011655851.1 (cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus] >KGN52223.1 hypothetical protein Csa_009104 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 6.4e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60
           MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60

Query: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120
           CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED
Sbjct: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120

Query: 121 RVRKSAKRSFCECK 135
           RVRKSAKRSFCECK
Sbjct: 121 RVRKSAKRSFCECK 134

[Close]

BLAST of CsaV3_5G035790 vs. NCBI nr
Match: XP_008446800.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >KAA0034681.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa] >TYK09232.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 4.6e-59
Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDE-EDGGAEEL 60
           MSTELDLRRTLLEIVRRPPIKLQIP P  ST+V+ GGD GGVIIQKDR+D+ EDGGAEEL
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLP--STAVVMGGDRGGVIIQKDRIDKGEDGGAEEL 60

Query: 61  SCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHE 120
            CRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLN+SFDHE
Sbjct: 61  CCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHE 120

Query: 121 DRVRKSAKRSFCECK 135
           DRVRKSAKRSFCECK
Sbjct: 121 DRVRKSAKRSFCECK 133

[Close]

BLAST of CsaV3_5G035790 vs. NCBI nr
Match: XP_038893025.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida])

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 113/134 (84.33%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60
           MST+LDLRRTLLEIVRRPPIKLQIP P+TS +    GDHGGVIIQKDR+ +E+   EEL 
Sbjct: 1   MSTDLDLRRTLLEIVRRPPIKLQIPLPSTSMA----GDHGGVIIQKDRITDEE---EELC 60

Query: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120
           CRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL SSFDHED
Sbjct: 61  CRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHED 120

Query: 121 RVRKSAKRSFCECK 135
           RVRKSAKRSFCECK
Sbjct: 121 RVRKSAKRSFCECK 127

[Close]

BLAST of CsaV3_5G035790 vs. NCBI nr
Match: XP_022957068.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata] >KAG6601198.1 hypothetical protein SDJN03_06431, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031993.1 hypothetical protein SDJN02_06035, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.8 bits (530), Expect = 3.0e-50
Identity = 105/134 (78.36%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60
           MST+LDLRRTLLE+VRRP IKLQIP P +S +     DHGGVIIQK+R+D  DGGAEEL 
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMA----ADHGGVIIQKERIDNIDGGAEELC 60

Query: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120
           CRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFVEIV R+EIEPY  SSFDHE+
Sbjct: 61  CRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHEN 120

Query: 121 RVRKSAKRSFCECK 135
           RV+KSAK SFCECK
Sbjct: 121 RVKKSAKISFCECK 130

[Close]

BLAST of CsaV3_5G035790 vs. NCBI nr
Match: XP_023531359.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-49
Identity = 105/134 (78.36%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60
           MST+LDLRRTLLE+VRRP IKLQIP P +S +     DHGGVIIQK+R D+ DGGAEEL 
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMA----ADHGGVIIQKERNDKIDGGAEELC 60

Query: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120
           CRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFVEIV R+EIEPY  SSFDHE+
Sbjct: 61  CRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHEN 120

Query: 121 RVRKSAKRSFCECK 135
           RV+KSAK SFCECK
Sbjct: 121 RVKKSAKISFCECK 130

[Close]

BLAST of CsaV3_5G035790 vs. ExPASy Swiss-Prot
Match: Q9LPP4 (Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 GN=SMR1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 35/101 (34.65%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 46  KDRVDEEDGGAEELSCRTPTSAENKIPAVEQCPPAPRKRKRPP-------------SCRR 105
           K + DE D   ++L C TPTS E+KIPAV   PP P ++ RPP             SC+R
Sbjct: 26  KTKKDEGDDDEDDLRCSTPTSQEHKIPAVVDSPPPPPRKPRPPPSAPSATAALMIRSCKR 85

Query: 106 RLMELEFVEIVHRDEIEPYLNSSFDHEDRVRKSAKRSFCEC 134
           +L+      I++R+EI+ + +S ++      K  +RS+  C
Sbjct: 86  KLLVSTCEIIMNREEIDRFFSSVYNETSTTAK-RRRSYPYC 125

[Close]

BLAST of CsaV3_5G035790 vs. ExPASy TrEMBL
Match: A0A0A0KRI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621910 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.1e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60
           MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60

Query: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120
           CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED
Sbjct: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120

Query: 121 RVRKSAKRSFCECK 135
           RVRKSAKRSFCECK
Sbjct: 121 RVRKSAKRSFCECK 134

[Close]

BLAST of CsaV3_5G035790 vs. ExPASy TrEMBL
Match: A0A5D3CD68 (Cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002260 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.2e-59
Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDE-EDGGAEEL 60
           MSTELDLRRTLLEIVRRPPIKLQIP P  ST+V+ GGD GGVIIQKDR+D+ EDGGAEEL
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLP--STAVVMGGDRGGVIIQKDRIDKGEDGGAEEL 60

Query: 61  SCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHE 120
            CRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLN+SFDHE
Sbjct: 61  CCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHE 120

Query: 121 DRVRKSAKRSFCECK 135
           DRVRKSAKRSFCECK
Sbjct: 121 DRVRKSAKRSFCECK 133

[Close]

BLAST of CsaV3_5G035790 vs. ExPASy TrEMBL
Match: A0A1S3BFF9 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=LOC103489420 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.2e-59
Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDE-EDGGAEEL 60
           MSTELDLRRTLLEIVRRPPIKLQIP P  ST+V+ GGD GGVIIQKDR+D+ EDGGAEEL
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLP--STAVVMGGDRGGVIIQKDRIDKGEDGGAEEL 60

Query: 61  SCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHE 120
            CRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLN+SFDHE
Sbjct: 61  CCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHE 120

Query: 121 DRVRKSAKRSFCECK 135
           DRVRKSAKRSFCECK
Sbjct: 121 DRVRKSAKRSFCECK 133

[Close]

BLAST of CsaV3_5G035790 vs. ExPASy TrEMBL
Match: A0A6J1GZ63 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita moschata OX=3662 GN=LOC111458554 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 105/134 (78.36%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60
           MST+LDLRRTLLE+VRRP IKLQIP P +S +     DHGGVIIQK+R+D  DGGAEEL 
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMA----ADHGGVIIQKERIDNIDGGAEELC 60

Query: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120
           CRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFVEIV R+EIEPY  SSFDHE+
Sbjct: 61  CRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHEN 120

Query: 121 RVRKSAKRSFCECK 135
           RV+KSAK SFCECK
Sbjct: 121 RVKKSAKISFCECK 130

[Close]

BLAST of CsaV3_5G035790 vs. ExPASy TrEMBL
Match: A0A6J1JRA3 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 GN=LOC111489107 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.2e-50
Identity = 104/134 (77.61%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60
           MST+LDLRRTLLE+VRRP IKLQIP P +S +     DHGGVIIQK+R+D  DGG EEL 
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMA----ADHGGVIIQKERIDNIDGGDEELC 60

Query: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120
           CRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFVEIV R+EIEPY  SSFDHE+
Sbjct: 61  CRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHEN 120

Query: 121 RVRKSAKRSFCECK 135
           RV+KSAK SFCECK
Sbjct: 121 RVKKSAKISFCECK 130

[Close]

BLAST of CsaV3_5G035790 vs. TAIR 10
Match: AT3G10525.1 (LOSS OF GIANT CELLS FROM ORGANS )

HSP 1 Score: 57.8 bits (138), Expect = 8.0e-09
Identity = 35/101 (34.65%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 46  KDRVDEEDGGAEELSCRTPTSAENKIPAVEQCPPAPRKRKRPP-------------SCRR 105
           K + DE D   ++L C TPTS E+KIPAV   PP P ++ RPP             SC+R
Sbjct: 26  KTKKDEGDDDEDDLRCSTPTSQEHKIPAVVDSPPPPPRKPRPPPSAPSATAALMIRSCKR 85

Query: 106 RLMELEFVEIVHRDEIEPYLNSSFDHEDRVRKSAKRSFCEC 134
           +L+      I++R+EI+ + +S ++      K  +RS+  C
Sbjct: 86  KLLVSTCEIIMNREEIDRFFSSVYNETSTTAK-RRRSYPYC 125

[Close]

BLAST of CsaV3_5G035790 vs. TAIR 10
Match: AT5G02420.1 (unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 9.1e-05
Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 50  DEEDGGA-EELSCRTPTSAENKIPAVEQ--CPPAPRKRK--RPPSCRRRLMELEFVEIVH 109
           D ED    EE  C+TPTS+++KIP V+   CPPAPRK K  R    +R+L  +  V  + 
Sbjct: 32  DHEDPTVNEEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRSSGTKRKLTPVNVVNRIP 91

Query: 110 RD---EIEPYLNSSFDHEDRVRKSAKR 129
            D   EIE +     D + R++KS K+
Sbjct: 92  IDLSREIEMFFE---DLDRRIKKSRKQ 115

[Close]

BLAST of CsaV3_5G035790 vs. TAIR 10
Match: AT2G37610.1 (unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.7e-04
Identity = 26/63 (41.27%), Postives = 35/63 (55.56%), Query Frame = 0


Query: 42  VIIQKDRVDEEDG----GAEELSCRTPTSAENKIPAVEQCPPAPRKRK------RPPSCR 95
           + +++ R+DEE+       E    +TPT  EN+IP V +CPPAP KR       R   CR
Sbjct: 73  ICLKRKRLDEEEEEEVVEEENDGFKTPTRPENRIPIVRECPPAPMKRSSEMFRGRTMYCR 132

[Close]

BLAST of CsaV3_5G035790 vs. TAIR 10
Match: AT1G08180.1 (unknown protein; Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 3.5e-04
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 45  QKDRVDEEDGGAEEL--SCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRL---MELEF 104
           Q++   ++    EEL  S  TPTS+++KIP VE CPP PRKR R  S  ++     +L F
Sbjct: 21  QEEEDHQDSSKKEELLESLCTPTSSDHKIPEVETCPPPPRKRPREISLTKKTRLSKDLRF 80

Query: 105 VEI--VHRDEIEPYLNSSFDHEDRVRKS 126
            E   V   E+E       +H  + R+S
Sbjct: 81  FEATDVGSQEVETLFVHEPNHVRKKRRS 108

[Close]

BLAST of CsaV3_5G035790 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 4.5e-04
Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 51 EEDGGAEELSC-RTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLM 96
          EED   EE  C  TPT+ E KIP + +CPPAPRKR+    CR  ++
Sbjct: 49 EEDCYNEEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVV 94

The following BLAST results are available for this feature:

BLAST of CsaV3_5G035790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655851.1	6.4e-69	100.00	cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus] >KGN52223.1 hyp...	[more]
XP_008446800.1	4.6e-59	90.37	PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >K...	[more]
XP_038893025.1	1.7e-53	84.33	cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]	[more]
XP_022957068.1	3.0e-50	78.36	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata] >KAG660...	[more]
XP_023531359.1	1.1e-49	78.36	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G035790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPP4	1.1e-07	34.65	Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CsaV3_5G035790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRI0	3.1e-69	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621910 PE=4 SV=1	[more]
A0A5D3CD68	2.2e-59	90.37	Cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BFF9	2.2e-59	90.37	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1GZ63	1.5e-50	78.36	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1JRA3	7.2e-50	77.61	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of CsaV3_5G035790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10525.1	8.0e-09	34.65	LOSS OF GIANT CELLS FROM ORGANS	[more]
AT5G02420.1	9.1e-05	40.23	unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bac...	[more]
AT2G37610.1	2.7e-04	41.27	unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bact...	[more]
AT1G08180.1	3.5e-04	36.36	unknown protein; Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bact...	[more]
AT5G40460.1	4.5e-04	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..67
None	No IPR available	PANTHER	PTHR33142:SF57	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR1-LIKE	coord: 21..129
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 21..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G035790.1	CsaV3_5G035790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032875	regulation of DNA endoreduplication