CsaV3_5G034940 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGATAATTATTTTGTTTTCTATTAATGTGTTAAATTGGGTCATATTTGATTTTGGATCCAAATTTTAGTGCCTATGTATGATTGTATAATTAATTTATAATTTCAAGGAACCTAATTAGTGCTCTCGGGTCTTTAGTGATTGACAAGCCCAACTGCACTTCTACTCGACCCTTAGTGGCAATTTTGTAATTGACTTCATCTTTTGCTATTTTGTGCTTGTTTGCTCTCCCTAATGAATATTTTCTACAAAATAAAACCCGAGGCATAATTTTGACCAATATCAAGCATTGTAACGTAAAAATCATAGCACTTTAATGATGCTATGAACGCATATGAAAAGAGACTGCTTTGAGAGTTTGCTAATCCCTCAAAGAAAATCAACATTTTAAAGAAAAAAAGAATTTTGAGTGTTTAAGGATAATCTTAACTTAATTTACATGAAAAACTCTAATAATCCCCTTCGACAATCGCAAACTCTAACTATCACTCTTGATGACTACGAATCAACTCACCATCCTCGTGACTAACAAAATTTGGTATGAATTTGAAATTAATAAAAACATTTTTAAGTATATAAAAAACTAAACCAAATTTTGCATAAAATTTCTCAAACACATAAATTTTTTTGGGGAAAAGAAACAAAAAAAAACTATTTTCTAATTCATTATTTAATTTGTAATTTAGAATCGGAAGACGATGGCGTCATCGTCTTCGTATTCTTCCGTAGCGCCGTGTTTGAACGTTCCACCGTTTTGACGACATAATGTCAAACACAACAATAAACTTCCGCAAGATTCATCGAACTTCAAAATTTTCCTCTTGATTTTTGTATCACTTTATCGATCATCCACTCGAAATTCATATATTAATCGACCCAAGAAGTAATTTTTTAAAATATCCAAACCAAGGCCCTGCGTATAAATTGATATACTCGCATATCCAAATCAAACACCGATTCGAAGGTTGCAACAATGGCGGACAAGTACGAGAAGGAGAATTTAGCCGAAAAGTACCTAGAAGGAAGGCCGAGATCTTACCCCGCCGAATGGTACTCCAGACTCGCTGCTCTCACTGCCGGCCACTCCCTCGCTTGCGACTTCGGCACCGGCAACGGCCAAGCCGCTCTTGGCGTCAGTCTCTTAAACCTTTAAATCGATCTAATTAATCAATTATCGTAAGGAATGTTCACGAAATTTCAATTTGATTTCGATTCAATTCCAGGTTGCAGAGCATTACAAGAAAGTAATCGGAATCGATGTGAGCAAATCGCAATTAGAATGCGCAATGAAGCACGAAAGGGTTCAATACCTCCATTTACCAGCGTCGATGAGCGAAGACGAGATGGTAAAATCAATCGGCGAGGAGAACACCGTAGATCTAATCATTTCCGCCGAAGCCGTACACTGGTTCGATCTGCCGAAATTCTACGCCGTCGCCACTCGTCTTCTCCGGAAACCCGGCGGAATCATCGCGGTGTGGGGATATTACTACATATCGTTGAACGAGGCGTTCGATGCTGCGATGAATCGATTGACGGAAGCGACGCTGCCTTATTGGGATGAGAAAGTCAAGGAATATGTACTGAAAGGCTACCGAACGATGCCGTTTCCGTTCGAGAGCGTGGGAATAGGATCGGAAGGGAAGCCGGAGGAGATGGAGATGGAGCAGAAGTTTTCCTTTGAAGGAATGTTGAAGTACCTGAAATCGATGGGGCCGGTGATTACGGCGAAGGAGAACGGCGTTGATGTGATGTGTGAAGAAATGGTTAAGGAATTGAGAGATGCTTGGGGCGGAGGAGGAGATTTGGTTCGAACCGTCGTCTATAAATGCTTTATGATTGCCGGAAAAGTTAAAGCGTAATGGATTGCCCGTCATGTTAACTTTAACGAACGAAGGACATAATGATTCATCAACCATTCGATCTACCAAATCCAAATAGTTTTATTTCTTTAGTTGAGTGTCTTTGTATTTTTTGTTAGGTTGGATCTTAAGATGACTTTGGGAGAATAATAAAGGGTGTGACACTTGGTCAAAAGTTTTTTTTATTAAGCATTGGATCGATGCTAAATATTAGAACTATGATCATGTCAATGTTAGCAATCGAGAACTATTTAGTGAAAATTCTACTCGTTTGGTCAAAAAGATGGTCTCGTGGATTGGTTCGTATGTTGATTTTGTTCGTATAAATTTTATAGATGTTTTAAAAAAAACAGTAAGATAAGTCAACTTATTTATTAATATATATGATACAATTGTCTTGTGTATATCACTTTCAATTTGTGATGGATTGCACTAGACTTTAATATATATCTATTTTTTTGTGATAGATAGTATAGATGTAGTATATTA ATGGTACTCCAGACTCGCTGCTCTCACTGCCGGCCACTCCCTCGCTTGCGACTTCGGCACCGGCAACGGCCAAGCCGCTCTTGGCGTTGCAGAGCATTACAAGAAAGTAATCGGAATCGATGTGAGCAAATCGCAATTAGAATGCGCAATGAAGCACGAAAGGGTTCAATACCTCCATTTACCAGCGTCGATGAGCGAAGACGAGATGATCTAATCATTTCCGCCGAAGCCGTACACTGGTTCGATCTGCCGAAATTCTACGCCGTCGCCACTCGTCTTCTCCGGAAACCCGGCGGAATCATCGCGGTGTGGGGATATTACTACATATCGTTGAACGAGGCGTTCGATGCTGCGATGAATCGATTGACGGAAGCGACGCTGCCTTATTGGGATGAGAAAGTCAAGGAATATGTACTGAAAGGCTACCGAACGATGCCGTTTCCGTTCGAGAGCGTGGGAATAGGATCGGAAGGGAAGCCGGAGGAGATGGAGATGGAGCAGAAGTTTTCCTTTGAAGGAATGTTGAAGTACCTGAAATCGATGGGGCCGGTGATTACGGCGAAGGAGAACGGCGTTGATGTGATGTGTGAAGAAATGGTTAAGGAATTGAGAGATGCTTGGGGCGGAGGAGGAGATTTGGTTCGAACCGTCGTCTATAAATGCTTTATGATTGCCGGAAAAGTTAAAGCGTAA ATGGTACTCCAGACTCGCTGCTCTCACTGCCGGCCACTCCCTCGCTTGCGACTTCGGCACCGGCAACGGCCAAGCCGCTCTTGGCGTTGCAGAGCATTACAAGAAAGTAATCGGAATCGATGTGAGCAAATCGCAATTAGAATGCGCAATGAAGCACGAAAGGGTTCAATACCTCCATTTACCAGCGTCGATGAGCGAAGACGAGATGATCTAATCATTTCCGCCGAAGCCGTACACTGGTTCGATCTGCCGAAATTCTACGCCGTCGCCACTCGTCTTCTCCGGAAACCCGGCGGAATCATCGCGGTGTGGGGATATTACTACATATCGTTGAACGAGGCGTTCGATGCTGCGATGAATCGATTGACGGAAGCGACGCTGCCTTATTGGGATGAGAAAGTCAAGGAATATGTACTGAAAGGCTACCGAACGATGCCGTTTCCGTTCGAGAGCGTGGGAATAGGATCGGAAGGGAAGCCGGAGGAGATGGAGATGGAGCAGAAGTTTTCCTTTGAAGGAATGTTGAAGTACCTGAAATCGATGGGGCCGGTGATTACGGCGAAGGAGAACGGCGTTGATGTGATGTGTGAAGAAATGGTTAAGGAATTGAGAGATGCTTGGGGCGGAGGAGGAGATTTGGTTCGAACCGTCGTCTATAAATGCTTTATGATTGCCGGAAAAGTTAAAGCGTAA MVLQTRCSHCRPLPRLRLRHRQRPSRSWRCRALQESNRNRCEQIAIRMRNEARKGSIPPFTSVDERRRDDLIISAEAVHWFDLPKFYAVATRLLRKPGGIIAVWGYYYISLNEAFDAAMNRLTEATLPYWDEKVKEYVLKGYRTMPFPFESVGIGSEGKPEEMEMEQKFSFEGMLKYLKSMGPVITAKENGVDVMCEEMVKELRDAWGGGGDLVRTVVYKCFMIAGKVKA* Homology
BLAST of CsaV3_5G034940 vs. NCBI nr
Match: KAE8648805.1 (hypothetical protein Csa_008630 [Cucumis sativus]) HSP 1 Score: 473.8 bits (1218), Expect = 8.6e-130 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. NCBI nr
Match: XP_004135059.1 (putative methyltransferase DDB_G0268948 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 1.5e-89 Identity = 163/169 (96.45%), Postives = 164/169 (97.04%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. NCBI nr
Match: KAA0034614.1 (putative methyltransferase [Cucumis melo var. makuwa] >TYK09166.1 putative methyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 329.3 bits (843), Expect = 2.6e-86 Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. NCBI nr
Match: XP_008446700.1 (PREDICTED: putative methyltransferase DDB_G0268948 [Cucumis melo]) HSP 1 Score: 329.3 bits (843), Expect = 2.6e-86 Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. NCBI nr
Match: XP_023517586.1 (putative methyltransferase DDB_G0268948 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 309.7 bits (792), Expect = 2.1e-80 Identity = 146/160 (91.25%), Postives = 155/160 (96.88%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. ExPASy Swiss-Prot
Match: Q55EX9 (Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0268948 PE=1 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04 Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. ExPASy TrEMBL
Match: A0A0A0KUM9 (Methyltransf_11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G611730 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 7.2e-90 Identity = 163/169 (96.45%), Postives = 164/169 (97.04%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. ExPASy TrEMBL
Match: A0A5D3CFM1 (Putative methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001580 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.3e-86 Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. ExPASy TrEMBL
Match: A0A1S3BGI4 (putative methyltransferase DDB_G0268948 OS=Cucumis melo OX=3656 GN=LOC103489343 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.3e-86 Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. ExPASy TrEMBL
Match: A0A6J1H1Z6 (putative methyltransferase DDB_G0268948 OS=Cucurbita moschata OX=3662 GN=LOC111458844 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 1.0e-80 Identity = 146/160 (91.25%), Postives = 155/160 (96.88%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. ExPASy TrEMBL
Match: A0A6J1J3V2 (putative methyltransferase DDB_G0268948 OS=Cucurbita maxima OX=3661 GN=LOC111483123 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 8.8e-80 Identity = 144/160 (90.00%), Postives = 155/160 (96.88%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. TAIR 10
Match: AT5G10830.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 196.1 bits (497), Expect = 3.2e-50 Identity = 89/160 (55.62%), Postives = 119/160 (74.38%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. TAIR 10
Match: AT4G22530.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 193.4 bits (490), Expect = 2.1e-49 Identity = 95/160 (59.38%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. TAIR 10
Match: AT1G55450.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 154.8 bits (390), Expect = 8.2e-38 Identity = 73/161 (45.34%), Postives = 108/161 (67.08%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. TAIR 10
Match: AT1G55450.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 154.8 bits (390), Expect = 8.2e-38 Identity = 73/161 (45.34%), Postives = 108/161 (67.08%), Query Frame = 0
BLAST of CsaV3_5G034940 vs. TAIR 10
Match: AT3G54150.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 148.3 bits (373), Expect = 7.7e-36 Identity = 70/159 (44.03%), Postives = 105/159 (66.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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