CsaV3_5G034630 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G034630
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPB1 domain-containing protein
Locationchr5: 27484728 .. 27486989 (-)
RNA-Seq ExpressionCsaV3_5G034630
SyntenyCsaV3_5G034630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGAACCACCGCCTCTGCCCATAACTCAACCGATTACGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCATCTCCGAGGTCTCGCAACACCGACACGTGGGATGAGCCTCTTGCACCCGGCCCACTCGCCAGTCGTCTCCGTCTTATGTGCAGCTATGGCGGCCATATAGTTCCTCGTCCTCACGATAAGACTCTTTGCTATGTATGTGGTGAGACTCGGATCGTGGTTGTCGACCGCCATACGTCTTTATCTGACCTTACTGCGCGTTTGTCGAAGACGCTTCTCAATGGTAGGCCGTTTACCTTGAAATATCAGCTTCCGAATGAGGACTTGGATTCTCTCATTTCTGTTACCACCGACGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCCGCAAAACCCTCGCGACTTAGGTTGTTTTTGTTCCCGATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTTGAGAGCTCAACTAGTTCTGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCGTCGGTCAATTGCTTGCTAGGGCTTGATGATGATGTTGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCGGATGGTTCTCAGCCTGGGTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCCGTTCCTGATTCGCCGATGATCGAGACGACGTCGTCATTTGGTTCTACCTCTTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCACGTGGAGGATAGTGGCAACAACGGTGGGGTTGGTGCTGGTGTAGTTCGAGTTCAAGATCAGAAGGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCACGATGAAGCTTTCGCGGCACTCTCATCACCGCCTCCTTTGCCTACAACTATCGTGGCTTCTGCGGCGGGCTCTGCAATTCCTGTGAGCTCAGCTGCCGGAGTAGTTGTAGGAGAATATACAAATCGGGTAATCTCCGATGACGAGAGATCCGACCATGGGGCGCCGGTCGGATACCGGAAACCACTACCACCGCAGCCTCAGTCTCTGCCTCCCCAATTGCAGCAGAAGTCAAGTGGACTTGTTGATATACCTTCCCCGGATTCGGTGTCAAGGTACTAATTGCTTGATTTTCTTTATCATTCTATGGTATTACCAATTCTGCTTAATTTCTTTCATCAATTAGAAGTTTGTGATGATTGTTAGTCTGAGTTTGTGCATGTTCTTTCTATTTTATTTTCTTTCTTCAGTGATAGTAGTTTGAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCATCTTCAGCTGTTAGGCTTCCTGGCAGTCCAGCAGATCCAAAAGTCAATTTTCCGGATCAGAATGCTCGAGTTCATATTCAACAACAGGTCCAAGAACCAGGATATGTGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAGCAACCACAGCAACAACAACCACAGCAACACCCACCTCAACCACAGCAATTCATACATGCTGGCGCACATTACATCCACCAGCACCCATCTGGTGCAGTTCAAATTCCTGCATTTTTCCCTGTATATTCTCCTCAGCACCATCATCATCCCCATCAAATTGAACAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGGCCAGGCTTATGGCAATTTGCCAGTACAGCAATCTACCATCAGCGAGTCTGCCACTGCTATTCCTCCTGGCCGACCTCAAACTCCTCCCAACCCAACTTTGGTTACAACTGCAGCTTATAACCACATGAGGAATCCCCCTATTGCAAAAACTGAAATGGCTGCTAATGCATTCAAACAGACAACTACAACTCCTCAGTCGTTAGTTCAGGTTCCCACAACTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTACTCCTACATCCGCTACTGCAAATTATGCCTACGAATTTTCGGATCCTGCTCATTCTCAGATATACTATACTCAGCCTCTTCCACCTTCTCAGTACCAAGCCATGCCAGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCGCAACCATTATAG

mRNA sequence

ATGACGGAACCACCGCCTCTGCCCATAACTCAACCGATTACGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCATCTCCGAGGTCTCGCAACACCGACACGTGGGATGAGCCTCTTGCACCCGGCCCACTCGCCAGTCGTCTCCGTCTTATGTGCAGCTATGGCGGCCATATAGTTCCTCGTCCTCACGATAAGACTCTTTGCTATGTATGTGGTGAGACTCGGATCGTGGTTGTCGACCGCCATACGTCTTTATCTGACCTTACTGCGCGTTTGTCGAAGACGCTTCTCAATGGTAGGCCGTTTACCTTGAAATATCAGCTTCCGAATGAGGACTTGGATTCTCTCATTTCTGTTACCACCGACGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCCGCAAAACCCTCGCGACTTAGGTTGTTTTTGTTCCCGATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTTGAGAGCTCAACTAGTTCTGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCGTCGGTCAATTGCTTGCTAGGGCTTGATGATGATGTTGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCGGATGGTTCTCAGCCTGGGTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCCGTTCCTGATTCGCCGATGATCGAGACGACGTCGTCATTTGGTTCTACCTCTTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCACGTGGAGGATAGTGGCAACAACGGTGGGGTTGGTGCTGGTGTAGTTCGAGTTCAAGATCAGAAGGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCACGATGAAGCTTTCGCGGCACTCTCATCACCGCCTCCTTTGCCTACAACTATCGTGGCTTCTGCGGCGGGCTCTGCAATTCCTGTGAGCTCAGCTGCCGGAGTAGTTGTAGGAGAATATACAAATCGGGTAATCTCCGATGACGAGAGATCCGACCATGGGGCGCCGGTCGGATACCGGAAACCACTACCACCGCAGCCTCAGTCTCTGCCTCCCCAATTGCAGCAGAAGTCAAGTGGACTTGTTGATATACCTTCCCCGGATTCGGTGTCAAGTGATAGTAGTTTGAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCATCTTCAGCTGTTAGGCTTCCTGGCAGTCCAGCAGATCCAAAAGTCAATTTTCCGGATCAGAATGCTCGAGTTCATATTCAACAACAGGTCCAAGAACCAGGATATGTGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAGCAACCACAGCAACAACAACCACAGCAACACCCACCTCAACCACAGCAATTCATACATGCTGGCGCACATTACATCCACCAGCACCCATCTGGTGCAGTTCAAATTCCTGCATTTTTCCCTGTATATTCTCCTCAGCACCATCATCATCCCCATCAAATTGAACAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGGCCAGGCTTATGGCAATTTGCCAGTACAGCAATCTACCATCAGCGAGTCTGCCACTGCTATTCCTCCTGGCCGACCTCAAACTCCTCCCAACCCAACTTTGGTTACAACTGCAGCTTATAACCACATGAGGAATCCCCCTATTGCAAAAACTGAAATGGCTGCTAATGCATTCAAACAGACAACTACAACTCCTCAGTCGTTAGTTCAGGTTCCCACAACTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTACTCCTACATCCGCTACTGCAAATTATGCCTACGAATTTTCGGATCCTGCTCATTCTCAGATATACTATACTCAGCCTCTTCCACCTTCTCAGTACCAAGCCATGCCAGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCGCAACCATTATAG

Coding sequence (CDS)

ATGACGGAACCACCGCCTCTGCCCATAACTCAACCGATTACGCCGGCGGTGTCGCCTCATCTCAACTATCCGGAGTCGTTGGACTCATCTCCGAGGTCTCGCAACACCGACACGTGGGATGAGCCTCTTGCACCCGGCCCACTCGCCAGTCGTCTCCGTCTTATGTGCAGCTATGGCGGCCATATAGTTCCTCGTCCTCACGATAAGACTCTTTGCTATGTATGTGGTGAGACTCGGATCGTGGTTGTCGACCGCCATACGTCTTTATCTGACCTTACTGCGCGTTTGTCGAAGACGCTTCTCAATGGTAGGCCGTTTACCTTGAAATATCAGCTTCCGAATGAGGACTTGGATTCTCTCATTTCTGTTACCACCGACGAGGATTTGGAGAATATGATTGATGAGTATGATCGGACGGCGAGTAATTCGTCTAACCCTGCCGCAAAACCCTCGCGACTTAGGTTGTTTTTGTTCCCGATTAAGCCGGATGTTTCTCAGTCGATCGGGCCAATTCTTGAGAGCTCAACTAGTTCTGATGACTGGTTTCTGAATGCTTTGAATGGTGCCGGTTTGCTCAATAGAGGTTTTTCCGACTCTGCGTCGGTCAATTGCTTGCTAGGGCTTGATGATGATGTTGGTGTTAATAACCTCGATTCGGGTCCGAGGGAGGCGGATGGTTCTCAGCCTGGGTCGTTTGGAAATGGTAAGGGTGGAAAACAGGATGTTCATTCCGTTCCTGATTCGCCGATGATCGAGACGACGTCGTCATTTGGTTCTACCTCTTCTTCGCCTTCTCTGGCGAATTTGCCGCCGATTCGGGTTCACGTGGAGGATAGTGGCAACAACGGTGGGGTTGGTGCTGGTGTAGTTCGAGTTCAAGATCAGAAGGTGGGAATTGAGGAGCAATTTTCGCAGATGAGTGTTGGTCAAAAGCAGCACGATGAAGCTTTCGCGGCACTCTCATCACCGCCTCCTTTGCCTACAACTATCGTGGCTTCTGCGGCGGGCTCTGCAATTCCTGTGAGCTCAGCTGCCGGAGTAGTTGTAGGAGAATATACAAATCGGGTAATCTCCGATGACGAGAGATCCGACCATGGGGCGCCGGTCGGATACCGGAAACCACTACCACCGCAGCCTCAGTCTCTGCCTCCCCAATTGCAGCAGAAGTCAAGTGGACTTGTTGATATACCTTCCCCGGATTCGGTGTCAAGTGATAGTAGTTTGAACAATCCGATGTCTCGCTCAAAACCTGTGATGTATCAAGAACAAGTTGTTCATCAAATCCCATCTTCAGCTGTTAGGCTTCCTGGCAGTCCAGCAGATCCAAAAGTCAATTTTCCGGATCAGAATGCTCGAGTTCATATTCAACAACAGGTCCAAGAACCAGGATATGTGTTACACTCTCAGTACGATCAGCATCAACACCAGCAACTTCAGCAACAGCAACCACAGCAACAACAACCACAGCAACACCCACCTCAACCACAGCAATTCATACATGCTGGCGCACATTACATCCACCAGCACCCATCTGGTGCAGTTCAAATTCCTGCATTTTTCCCTGTATATTCTCCTCAGCACCATCATCATCCCCATCAAATTGAACAGCAGTATCCAGTCTACTACCTGCCTGCTAGACAGGGCCAGGCTTATGGCAATTTGCCAGTACAGCAATCTACCATCAGCGAGTCTGCCACTGCTATTCCTCCTGGCCGACCTCAAACTCCTCCCAACCCAACTTTGGTTACAACTGCAGCTTATAACCACATGAGGAATCCCCCTATTGCAAAAACTGAAATGGCTGCTAATGCATTCAAACAGACAACTACAACTCCTCAGTCGTTAGTTCAGGTTCCCACAACTCAGCATCAGCAACAATATGTTGGCTACAACCAGGGTTACTCTCATATTCAGCATCCATCCCAATCAGTTACTCCTACATCCGCTACTGCAAATTATGCCTACGAATTTTCGGATCCTGCTCATTCTCAGATATACTATACTCAGCCTCTTCCACCTTCTCAGTACCAAGCCATGCCAGCAGCTGCTGTAATGCTGCCTGAAAATTCTGCTCAGCTTCCCACTGACAACATCAAGCAGCAGATGAGAACTTCGCAACCATTATAG

Protein sequence

MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQDVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIEEQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDDERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMYQEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQQQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL*
Homology
BLAST of CsaV3_5G034630 vs. NCBI nr
Match: XP_004135079.1 (RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetical protein Csa_009068 [Cucumis sativus])

HSP 1 Score: 1378.6 bits (3567), Expect = 0.0e+00
Identity = 708/708 (100.00%), Postives = 708/708 (100.00%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480
           QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480

Query: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540
           QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV
Sbjct: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600
           YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660
           AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660

Query: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 709
           AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 708

BLAST of CsaV3_5G034630 vs. NCBI nr
Match: XP_008446641.1 (PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa] >TYK09140.1 RNA polymerase II degradation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1336.6 bits (3458), Expect = 0.0e+00
Identity = 692/708 (97.74%), Postives = 696/708 (98.31%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           MTEPPP P TQ I PAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNG VGAGVVRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQ DEAF ALSSPPPLPTTIV SAAGSAIPVSSAAG+VVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVG+RKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480
           QEQ VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQE GYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540
           QQP QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV
Sbjct: 481 QQP-QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600
           YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660
           AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDP 660

Query: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 709
           AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

BLAST of CsaV3_5G034630 vs. NCBI nr
Match: XP_038892018.1 (putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispida])

HSP 1 Score: 1306.2 bits (3379), Expect = 0.0e+00
Identity = 678/711 (95.36%), Postives = 687/711 (96.62%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           MTEPPP P TQP+ P VSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQPLPPVVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGN+GGV AG VRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNSGGVAAGAVRVQDQKVGIE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVAS-AAGSAIPVSSAAGVVVGEYTNRVISD 360
           EQFSQMSVGQKQ DEAF ALSSPPPLPTTIVAS AAGSAIPV SAAGV VGEYTNRVISD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVASAAAGSAIPVCSAAGVGVGEYTNRVISD 360

Query: 361 DERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVM 420
           DERSDHGAPVGYRKPLPPQPQSL PQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVM
Sbjct: 361 DERSDHGAPVGYRKPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVM 420

Query: 421 YQEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQ 480
           YQEQVVHQIP+SAVRLPGSPADPKVN  DQNARVHI QQVQE GYVLHSQYDQHQHQQLQ
Sbjct: 421 YQEQVVHQIPTSAVRLPGSPADPKVNVSDQNARVHIPQQVQESGYVLHSQYDQHQHQQLQ 480

Query: 481 QQQPQQQ--QPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQ 540
           QQQ QQQ  QPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQ+EQQ
Sbjct: 481 QQQQQQQQPQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQMEQQ 540

Query: 541 YPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAK 600
           YPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRN PIAK
Sbjct: 541 YPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNAPIAK 600

Query: 601 TEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEF 660
           TEM+ANA+KQTTTTPQSLVQVP +QHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEF
Sbjct: 601 TEMSANAYKQTTTTPQSLVQVPASQHQQQYVGYNQGYSHIQHPSQSVAPTSATANYAYEF 660

Query: 661 SDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 709
           SDPAHSQIYYTQPL PSQYQAMPAAAVMLPENSAQLPTDN+KQQMRTSQPL
Sbjct: 661 SDPAHSQIYYTQPLAPSQYQAMPAAAVMLPENSAQLPTDNMKQQMRTSQPL 711

BLAST of CsaV3_5G034630 vs. NCBI nr
Match: XP_022956700.1 (putative uncharacterized protein DDB_G0268364 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1233.0 bits (3189), Expect = 0.0e+00
Identity = 643/720 (89.31%), Postives = 661/720 (91.81%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           M EPPPL   QP+  A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS N+GG GA  VR+QDQKVG+E
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGCGAAAVRIQDQKVGVE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQM +GQKQ DEAF ALSSPPPLPTTIVASAAGSAIPVSSAAGV VG+YTNRVISDD
Sbjct: 301 EQFSQMIIGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVGVGDYTNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVGYR+PLPPQPQSL PQLQQKSSGLVDIPSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQH----- 480
           QEQVVHQIPSS   LPG+PADP+VN  DQNARVHI QQVQE GYVL S YDQHQH     
Sbjct: 421 QEQVVHQIPSSTAWLPGNPADPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 481 -------QQLQQQQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHH 540
                  QQLQQQQ QQQQPQQHP QPQQFIHAGAHYIHQHPSGAV IPAFFPVYSPQ H
Sbjct: 481 LQQQQQQQQLQQQQQQQQQPQQHPSQPQQFIHAGAHYIHQHPSGAVPIPAFFPVYSPQPH 540

Query: 541 HHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYN 600
           HHPHQ+EQQYPVYYLPARQGQAYGNLPVQQS+ISESATAIPPGRPQTPPNPTLVT+AAYN
Sbjct: 541 HHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIPPGRPQTPPNPTLVTSAAYN 600

Query: 601 HMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTS 660
           H+RN PIAKTEMAA A+KQTTT  QSLVQVPT QHQQQYV YNQGYSHIQHPSQSV PTS
Sbjct: 601 HVRNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVAYNQGYSHIQHPSQSVAPTS 660

Query: 661 ATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 709
           ATANYAYEFSDPAHSQIY+TQPL PSQYQAMPAAAVMLPENSAQ PTDNIK QMRTSQPL
Sbjct: 661 ATANYAYEFSDPAHSQIYFTQPLAPSQYQAMPAAAVMLPENSAQHPTDNIKPQMRTSQPL 720

BLAST of CsaV3_5G034630 vs. NCBI nr
Match: XP_022966093.1 (RNA polymerase II degradation factor 1-like [Cucurbita maxima])

HSP 1 Score: 1222.6 bits (3162), Expect = 0.0e+00
Identity = 643/739 (87.01%), Postives = 659/739 (89.17%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           M EPPPL   QP+  A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS N+GG GAG VR+QDQKVGIE
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGGGAGAVRIQDQKVGIE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQM +GQK  DEAF ALSSPPPLPTTIVASAAGSAIPVS AA V VG+Y NRVISDD
Sbjct: 301 EQFSQMIIGQKLQDEAFTALSSPPPLPTTIVASAAGSAIPVSLAAAVGVGDYMNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVGYR+PLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQL-- 480
           QEQVVHQIPSS  RLPG+P+DP+VN  DQNARVHI QQVQE GYVL S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTARLPGNPSDPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 481 -----------------------------QQQQPQQQQPQQHPPQPQQFIHAGAHYIHQH 540
                                        QQQQ QQQQ QQHP QPQQFIHAGAHYIHQH
Sbjct: 481 LQQQQQLQQQQQLQQQHQQHQQQQLQQQQQQQQQQQQQQQQHPSQPQQFIHAGAHYIHQH 540

Query: 541 PSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIP 600
           PSGAV IPAFFPVYSPQ HHHPHQ+EQQYPVYYLPARQGQAYGNLPVQQS+ISESATAIP
Sbjct: 541 PSGAVPIPAFFPVYSPQPHHHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIP 600

Query: 601 PGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVG 660
           PGRPQTPPNPTLVTTAAYNH RN PIAKTEMAA A+KQTTT  QSLVQVPT QHQQQYV 
Sbjct: 601 PGRPQTPPNPTLVTTAAYNHARNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVA 660

Query: 661 YNQGYSHIQHPSQSVTPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPEN 709
           YNQGYSHIQHPSQSV PTSATANYAYEFSDPAHSQIYYTQPL PSQYQAMPAAAVMLPE+
Sbjct: 661 YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPES 720

BLAST of CsaV3_5G034630 vs. ExPASy TrEMBL
Match: A0A0A0KWH3 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV=1)

HSP 1 Score: 1378.6 bits (3567), Expect = 0.0e+00
Identity = 708/708 (100.00%), Postives = 708/708 (100.00%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG
Sbjct: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480
           QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480

Query: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540
           QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV
Sbjct: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600
           YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660
           AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660

Query: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 709
           AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 708

BLAST of CsaV3_5G034630 vs. ExPASy TrEMBL
Match: A0A5A7SVC4 (RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001310 PE=4 SV=1)

HSP 1 Score: 1336.6 bits (3458), Expect = 0.0e+00
Identity = 692/708 (97.74%), Postives = 696/708 (98.31%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           MTEPPP P TQ I PAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNG VGAGVVRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQ DEAF ALSSPPPLPTTIV SAAGSAIPVSSAAG+VVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVG+RKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480
           QEQ VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQE GYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540
           QQP QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV
Sbjct: 481 QQP-QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600
           YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660
           AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDP 660

Query: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 709
           AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

BLAST of CsaV3_5G034630 vs. ExPASy TrEMBL
Match: A0A1S3BF26 (RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 PE=4 SV=1)

HSP 1 Score: 1336.6 bits (3458), Expect = 0.0e+00
Identity = 692/708 (97.74%), Postives = 696/708 (98.31%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           MTEPPP P TQ I PAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG
Sbjct: 1   MTEPPPPPPTQTIPPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNP+AKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPSAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ
Sbjct: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNG VGAGVVRVQDQK+GIE
Sbjct: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGAVGAGVVRVQDQKLGIE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQMSVGQKQ DEAF ALSSPPPLPTTIV SAAGSAIPVSSAAG+VVGEYTNRVISDD
Sbjct: 301 EQFSQMSVGQKQQDEAFTALSSPPPLPTTIVVSAAGSAIPVSSAAGLVVGEYTNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVG+RKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY
Sbjct: 361 ERSDHGAPVGHRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQ 480
           QEQ VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQE GYVLHSQYDQHQHQQLQQ
Sbjct: 421 QEQ-VHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQESGYVLHSQYDQHQHQQLQQ 480

Query: 481 QQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540
           QQP QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV
Sbjct: 481 QQP-QQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQQYPV 540

Query: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600
           YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM
Sbjct: 541 YYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEM 600

Query: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 660
           AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSV PTSATANYAYEFSDP
Sbjct: 601 AANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVPPTSATANYAYEFSDP 660

Query: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 709
           AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL
Sbjct: 661 AHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 706

BLAST of CsaV3_5G034630 vs. ExPASy TrEMBL
Match: A0A6J1GYH7 (PB1 domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111458340 PE=4 SV=1)

HSP 1 Score: 1233.0 bits (3189), Expect = 0.0e+00
Identity = 643/720 (89.31%), Postives = 661/720 (91.81%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           M EPPPL   QP+  A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS N+GG GA  VR+QDQKVG+E
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGCGAAAVRIQDQKVGVE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQM +GQKQ DEAF ALSSPPPLPTTIVASAAGSAIPVSSAAGV VG+YTNRVISDD
Sbjct: 301 EQFSQMIIGQKQQDEAFTALSSPPPLPTTIVASAAGSAIPVSSAAGVGVGDYTNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVGYR+PLPPQPQSL PQLQQKSSGLVDIPSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLAPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQH----- 480
           QEQVVHQIPSS   LPG+PADP+VN  DQNARVHI QQVQE GYVL S YDQHQH     
Sbjct: 421 QEQVVHQIPSSTAWLPGNPADPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 481 -------QQLQQQQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFFPVYSPQHH 540
                  QQLQQQQ QQQQPQQHP QPQQFIHAGAHYIHQHPSGAV IPAFFPVYSPQ H
Sbjct: 481 LQQQQQQQQLQQQQQQQQQPQQHPSQPQQFIHAGAHYIHQHPSGAVPIPAFFPVYSPQPH 540

Query: 541 HHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYN 600
           HHPHQ+EQQYPVYYLPARQGQAYGNLPVQQS+ISESATAIPPGRPQTPPNPTLVT+AAYN
Sbjct: 541 HHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIPPGRPQTPPNPTLVTSAAYN 600

Query: 601 HMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTS 660
           H+RN PIAKTEMAA A+KQTTT  QSLVQVPT QHQQQYV YNQGYSHIQHPSQSV PTS
Sbjct: 601 HVRNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVAYNQGYSHIQHPSQSVAPTS 660

Query: 661 ATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPENSAQLPTDNIKQQMRTSQPL 709
           ATANYAYEFSDPAHSQIY+TQPL PSQYQAMPAAAVMLPENSAQ PTDNIK QMRTSQPL
Sbjct: 661 ATANYAYEFSDPAHSQIYFTQPLAPSQYQAMPAAAVMLPENSAQHPTDNIKPQMRTSQPL 720

BLAST of CsaV3_5G034630 vs. ExPASy TrEMBL
Match: A0A6J1HQW4 (RNA polymerase II degradation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465567 PE=4 SV=1)

HSP 1 Score: 1222.6 bits (3162), Expect = 0.0e+00
Identity = 643/739 (87.01%), Postives = 659/739 (89.17%), Query Frame = 0

Query: 1   MTEPPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGG 60
           M EPPPL   QP+  A SP LNYPESLDSSPRSRNTDTWDEPLAPGPLA RLRLMCSYGG
Sbjct: 1   MMEPPPLTTAQPLPTAASPQLNYPESLDSSPRSRNTDTWDEPLAPGPLAGRLRLMCSYGG 60

Query: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSL 120
           HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGR FTLKYQLPNEDLDSL
Sbjct: 61  HIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRSFTLKYQLPNEDLDSL 120

Query: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDD 180
           ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFP KPDVSQSIGPILESSTSS+D
Sbjct: 121 ISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPTKPDVSQSIGPILESSTSSED 180

Query: 181 WFLNALNGAGLLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQ 240
           WFLNALNGAG LNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGS GNGK GKQ
Sbjct: 181 WFLNALNGAGFLNRGFSDSASVNCLLGLDDDVGVNNLDSGPREADGSQPGSLGNGKSGKQ 240

Query: 241 DVHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIE 300
           D+HSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDS N+GG GAG VR+QDQKVGIE
Sbjct: 241 DIHSVPDSPMIETTSSFGSTSSSPSLANLPPIRVHVEDSVNSGGGGAGAVRIQDQKVGIE 300

Query: 301 EQFSQMSVGQKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDD 360
           EQFSQM +GQK  DEAF ALSSPPPLPTTIVASAAGSAIPVS AA V VG+Y NRVISDD
Sbjct: 301 EQFSQMIIGQKLQDEAFTALSSPPPLPTTIVASAAGSAIPVSLAAAVGVGDYMNRVISDD 360

Query: 361 ERSDHGAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMY 420
           ERSDHGAPVGYR+PLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSD+SLNN MSRSKPVMY
Sbjct: 361 ERSDHGAPVGYRQPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDTSLNNQMSRSKPVMY 420

Query: 421 QEQVVHQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQL-- 480
           QEQVVHQIPSS  RLPG+P+DP+VN  DQNARVHI QQVQE GYVL S YDQHQHQQL  
Sbjct: 421 QEQVVHQIPSSTARLPGNPSDPEVNISDQNARVHIPQQVQESGYVLQSHYDQHQHQQLQQ 480

Query: 481 -----------------------------QQQQPQQQQPQQHPPQPQQFIHAGAHYIHQH 540
                                        QQQQ QQQQ QQHP QPQQFIHAGAHYIHQH
Sbjct: 481 LQQQQQLQQQQQLQQQHQQHQQQQLQQQQQQQQQQQQQQQQHPSQPQQFIHAGAHYIHQH 540

Query: 541 PSGAVQIPAFFPVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIP 600
           PSGAV IPAFFPVYSPQ HHHPHQ+EQQYPVYYLPARQGQAYGNLPVQQS+ISESATAIP
Sbjct: 541 PSGAVPIPAFFPVYSPQPHHHPHQMEQQYPVYYLPARQGQAYGNLPVQQSSISESATAIP 600

Query: 601 PGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVG 660
           PGRPQTPPNPTLVTTAAYNH RN PIAKTEMAA A+KQTTT  QSLVQVPT QHQQQYV 
Sbjct: 601 PGRPQTPPNPTLVTTAAYNHARNAPIAKTEMAAKAYKQTTTAAQSLVQVPTNQHQQQYVA 660

Query: 661 YNQGYSHIQHPSQSVTPTSATANYAYEFSDPAHSQIYYTQPLPPSQYQAMPAAAVMLPEN 709
           YNQGYSHIQHPSQSV PTSATANYAYEFSDPAHSQIYYTQPL PSQYQAMPAAAVMLPE+
Sbjct: 661 YNQGYSHIQHPSQSVAPTSATANYAYEFSDPAHSQIYYTQPLAPSQYQAMPAAAVMLPES 720

BLAST of CsaV3_5G034630 vs. TAIR 10
Match: AT2G01190.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 568.9 bits (1465), Expect = 5.6e-162
Identity = 383/772 (49.61%), Postives = 491/772 (63.60%), Query Frame = 0

Query: 3   EPPPLPI-------------TQPITPAVSPHL--NYPESLDSSPRSRNTDTWDEPLAP-- 62
           EPPP  +             T P+ P + PH+  +YPESLDSSPRSR TD WD+  AP  
Sbjct: 2   EPPPSSLSSTAVASTSISAATAPVPPPLPPHVTSSYPESLDSSPRSRTTDGWDDLPAPSG 61

Query: 63  -------GPLASRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSK 122
                    ++S+LR MCSYGGHI+PRPHDK+LCY+ G+TRIVVVDR++SL  L ARLS 
Sbjct: 62  GGGGGGGSAVSSKLRFMCSYGGHILPRPHDKSLCYMGGDTRIVVVDRNSSLPSLIARLSN 121

Query: 123 TLLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLF 182
           TLL+GR FTLKYQLP+EDLDSLISVTTDEDL+NMI+EYDRT S S+  + KPSRLRLFLF
Sbjct: 122 TLLDGRSFTLKYQLPSEDLDSLISVTTDEDLDNMIEEYDRTISASN--STKPSRLRLFLF 181

Query: 183 PIKPDVSQSIGPILESSTSSDDWFLNALNGAGLLNRGFSDS-ASVNCLLGLDDDVGV--N 242
             KP+ +QS+G ILESS  SDDWFLNALN AGLLNRGFSDS  +VN LLGLDD + +  N
Sbjct: 182 TSKPEATQSMGQILESSAKSDDWFLNALNSAGLLNRGFSDSDTNVNRLLGLDDALALRSN 241

Query: 243 NLDSGPREADGSQ----------PGSFGNGKGGKQDVHSVPDSPMIETTSSFGSTSSSPS 302
           + D+  R+ D             P      + G QDV+ +PDSPM++T+SSFGSTSSSPS
Sbjct: 242 SGDNNNRDGDDGSVKSAKQQQPPPPQQQEQQQGGQDVNCLPDSPMLDTSSSFGSTSSSPS 301

Query: 303 LANLPPIRVHVEDSGNNGGVGAGVVRVQDQK-VGIEEQFSQMSVGQKQ--HDEAFAALSS 362
           LANLPPIRVHVE+ G       GV  + DQ+ +GIEEQF++ +VG K   HD+ FAA+SS
Sbjct: 302 LANLPPIRVHVEEPG-------GVRTLPDQRNLGIEEQFARFNVGNKHQLHDDGFAAISS 361

Query: 363 PPPLPTTIVASAAGSAIPVSSAAGVVVGEYTNRVISDDERSDHGAPVGYRKPLPP--QPQ 422
           PPP+P TI   AA    PV++A   V  E+  RV SDDERSDHG   GYRKP  P  QPQ
Sbjct: 362 PPPMPVTIALPAA----PVTAA--TVSNEFQARVYSDDERSDHGVQAGYRKPPTPRSQPQ 421

Query: 423 SLPP----QLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMYQEQVVHQIPSSAVRLP 482
           +LPP    QL+  S G  ++PSP+SVSSDSS++NPM   +P +YQE +  QIPS +  + 
Sbjct: 422 NLPPQQAHQLKSNSGGGHELPSPNSVSSDSSMSNPMFHQRPSVYQEPIA-QIPSGSTVVT 481

Query: 483 G--SPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQQQPQQQQPQQHPPQ 542
           G  +P+DP        + +  Q Q Q+P Y+LH Q+         +QQ  Q QPQ     
Sbjct: 482 GMINPSDP--------STLLSQHQNQDPAYILHPQF---------EQQSAQSQPQ----- 541

Query: 543 PQQFIHAGA--HYIHQHPSGAVQIPAFFPVYSPQH-----HHHPHQIEQQ-YPVYYLPAR 602
            QQFIH  A   YIH HPS  + +P +  VY  Q      H H  +++QQ YPVYY+ A 
Sbjct: 542 -QQFIHTAAPPQYIHHHPSSGLPVPTYIQVYPSQQPQQSFHQHAGRLDQQPYPVYYVTAP 601

Query: 603 QGQAYGNLPVQQS-TISESATAIPPGRPQTPPNPTLVTTAAYNHMRNPPIAKTEMAANAF 662
                 ++PV QS ++S++A +IP       PN T++     NHMR+    K EM     
Sbjct: 602 VPPRPYSMPVPQSPSVSDAAGSIPSNH----PNSTMMPPPPNNHMRSVSSGKPEMGQAGV 661

Query: 663 KQTTTTP-----QSLVQVPTTQHQQQYVGYNQGYSHIQHPSQSVTPTSATANYAYEFSDP 709
              TT P     Q + Q+PT  +QQQ++GY+Q    I+HP QS   ++   NY YE+ D 
Sbjct: 662 --YTTAPGVGGAQMVHQIPT--NQQQFMGYSQ----IRHPPQS--GSAGNPNYGYEYVDN 720

BLAST of CsaV3_5G034630 vs. TAIR 10
Match: AT3G18230.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 318.9 bits (816), Expect = 1.0e-86
Identity = 286/748 (38.24%), Postives = 393/748 (52.54%), Query Frame = 0

Query: 4   PPPLPITQPITPAVSPHLNYPESLDSSPRSRNTDTW--DEPLAPGPLASRLRLMCSYGGH 63
           P P        PA    +   + +D SPR+  TDT    EPLA  P  ++LRLMCS+GGH
Sbjct: 15  PTPAAAVSSAIPAPVKSVAVQQPIDGSPRAVATDTGGIPEPLAAVP-GAKLRLMCSFGGH 74

Query: 64  IVPRPHDKTLCYVCGETRIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSLI 123
           I+PRPHDK+L Y  GETRIVVVDR  SLS L +RLS  LLNGR FTLKYQLP+EDLDSL+
Sbjct: 75  IMPRPHDKSLTYSGGETRIVVVDRRASLSSLRSRLSSMLLNGRSFTLKYQLPSEDLDSLV 134

Query: 124 SVTTDEDLENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDW 183
           ++TTDEDLENMI+EYDR AS+++  A    RLRLFLF  K + + ++G +L+  T SD W
Sbjct: 135 TITTDEDLENMIEEYDRAASSAT--ATATQRLRLFLFANKLETAATMGSLLD-GTKSDTW 194

Query: 184 FLNALNGAGLLNRGFSDSASV-NCLLGLDDDVG----VNNLDSGPREADGSQPGSFGNGK 243
           F++ALN +GLL RG SDSA+V N L+ LD+  G    + NL++     +  +     NG 
Sbjct: 195 FVDALNQSGLLPRGLSDSAAVNNTLVNLDEASGGETEIQNLETNVGGENNKRGDLVANGV 254

Query: 244 GGKQDVH--SVPDSPMIETT-SSFGSTSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQ 303
              Q++H  S+PDSPM+E   SS GS+SSSPS +NLPPIRV V                +
Sbjct: 255 ISHQEMHMSSMPDSPMMEAAGSSIGSSSSSPSTSNLPPIRVRVS---------------E 314

Query: 304 DQKVGIEEQFSQMSVG----QKQHDEAFAALSSPPPLPTTIVASAAGSAIPVSSAAGVVV 363
           DQ+  IEEQ +QM+      Q+Q D+  + +++ P +      +   +A+  ++A G   
Sbjct: 315 DQR--IEEQLAQMTFSNMQTQRQFDDGVSLMANRPMMIPP--GAMNDAAMAYNNAPGDGT 374

Query: 364 GEYTNRVIS-DDERSDHGAPVGYRK-PLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSS 423
              +N  +S +D+RS+ G   GYRK PLP QP ++PP    ++ G   + SPDSV+SD+S
Sbjct: 375 APASNGHVSPEDDRSELGVSTGYRKPPLPMQPVTIPP----RTVGGYGLTSPDSVASDTS 434

Query: 424 LNNPMSRSKPVMYQEQVVHQIPSSAVRLPGSPADPKVNFPD----QNARVHIQQQ---VQ 483
           +++  S SKP+ YQ+Q            P  P  P V  P+    Q+++V  Q +    Q
Sbjct: 435 ISSATSFSKPMYYQDQP-----------PALPRAPPVAQPETTSAQSSQVLPQTENTSAQ 494

Query: 484 EPGYVLHSQYDQHQHQQLQQQQPQQQQPQQHPPQPQQFIHAGAHYIHQHPSGAVQIPAFF 543
              +VL SQ   +     QQQQP  QQP         F+H G  YI  HPS       + 
Sbjct: 495 TTSHVL-SQPGTYTTMDQQQQQPLAQQP---------FLHQGVQYI-PHPS------QYI 554

Query: 544 PVYSPQHHHHPHQIEQQYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPT 603
           P+YS Q        +Q YPVY +   Q Q Y                IP G P   PN  
Sbjct: 555 PIYSHQ--------QQNYPVYVMSVPQSQQY----------------IPAGTPPLYPNSK 614

Query: 604 LVTTAAYNHMRNPPIAKTEMAANAFKQTTTTPQSLVQVPTTQHQQQYVGYNQGYSHIQHP 663
             T            ++ E A N ++     P  ++Q+   Q Q QY+GY     H  + 
Sbjct: 615 PGTN-----------SRPEAAQNVYR---AAPPQVIQL---QQQHQYMGYAGAPQHSTNA 666

Query: 664 SQSV------TPTSATANYA--YEFSDPAHSQIYYTQPLP--------PSQYQAM--PAA 709
           + +         T+A ANY   +E+++  +  +YY    P         S YQ+M   AA
Sbjct: 675 NANYGTGAPQHSTNANANYGGPFEYTNSPNETVYYHTQAPAANTAIPLASPYQSMTPAAA 666

BLAST of CsaV3_5G034630 vs. TAIR 10
Match: AT4G05150.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 144.1 bits (362), Expect = 4.4e-34
Identity = 111/275 (40.36%), Postives = 150/275 (54.55%), Query Frame = 0

Query: 25  ESLDSSPRSRNTDTWDEPLAPGPLASRLRLMCSYGGHIVPRPHDKTLCYVCGETRIVVVD 84
           +SL SSPRS     +D          R+R MC++GG I+PRP D  LCYV G+ R+V V 
Sbjct: 43  DSLASSPRSE----YDS-------QPRVRFMCTFGGRILPRPPDNQLCYVGGDNRMVAVH 102

Query: 85  RHTSLSDLTARLSKTLLNGRP-FTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTASNS 144
           RHT+ + L ++L+K  L+G+   ++KYQLPNEDLD+LISV+TDED+ENM+DEYDR A N 
Sbjct: 103 RHTTFASLLSKLAK--LSGKSNISVKYQLPNEDLDALISVSTDEDVENMMDEYDRVAQN- 162

Query: 145 SNPAAKPSRLRLFLF-------PIKPDVSQSIGPILESSTSSDDWFLNALN-GAGLLNRG 204
            NP A  SRLRLFLF             + SI  +L+SS + + WFL+ALN G+      
Sbjct: 163 QNPRA--SRLRLFLFTKNVAGEEDNDSRASSISSLLDSSVNREQWFLDALNLGSSAAATA 222

Query: 205 FSDSASVNCLLGLDDDV------------GVNNLD--SGPREADGSQPGSFGNGKGGKQ- 264
            S+  S      +  +V            G++N D  + P E     P      K  ++ 
Sbjct: 223 VSNGGSGRVFERVRSEVSSIVSEVPDYLFGLDNFDETAPPHELRDRDP----RAKIQREV 282

Query: 265 DVHSVPDSPMIETTSSFGSTSSSP----SLANLPP 272
              S P SP  +  S +GSTSS+P    S   LPP
Sbjct: 283 STLSDPGSPRRDVPSPYGSTSSAPVMRISTPELPP 297

BLAST of CsaV3_5G034630 vs. TAIR 10
Match: AT5G09620.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 130.6 bits (327), Expect = 5.1e-30
Identity = 81/173 (46.82%), Postives = 104/173 (60.12%), Query Frame = 0

Query: 22  NYPESLDSSPRSR-----NTDTWDEPLAPGPLASRLRLMCSYGGHIVPRPHDKTLCYVCG 81
           +YP+S +SSPRSR     N   W++         +++LMCSYGG I PRPHD  L YV G
Sbjct: 8   SYPDSAESSPRSRDVEFENPSPWEDQQQQN---YKVKLMCSYGGKIQPRPHDNQLTYVNG 67

Query: 82  ETRIVVVDRHTSLSDLTARLSKTLL---NGRPFTLKYQLPNEDLDSLISVTTDEDLENMI 141
           +T+I+ VDR      L ++LS       +G   + KYQLP EDLD+LISVT DEDLE+M+
Sbjct: 68  DTKIMSVDRGIRFPALVSKLSAVCSGGGDGGEISFKYQLPGEDLDALISVTNDEDLEHMM 127

Query: 142 DEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDWFLNAL 187
            EYDR    S+    KP+R+RLFLFP  P +S   G   E ST SD   LN +
Sbjct: 128 HEYDRLLRLST----KPARMRLFLFPSSP-ISGGFGS--EGSTKSDRDTLNPI 170

BLAST of CsaV3_5G034630 vs. TAIR 10
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 130.6 bits (327), Expect = 5.1e-30
Identity = 86/179 (48.04%), Postives = 106/179 (59.22%), Query Frame = 0

Query: 22  NYPESLDSSPRSRNTDTWDEPLAP--------GPLASRLRLMCSYGGHIVPRPHDKTLCY 81
           +YP+S DSSPRSR  + +D P  P           + +++ MCSYGG I PRPHD  L Y
Sbjct: 8   SYPDSTDSSPRSREIE-FDNPPPPWDDQNQNQQQHSYKVKFMCSYGGKIQPRPHDNQLTY 67

Query: 82  VCGETRIVVVDRHTSLSDLTARLSKTL----LNGRPFTLKYQLPNEDLDSLISVTTDEDL 141
           V GET+I+ VDR      L ++LS         G   T KYQLP EDLD+LISVT D+DL
Sbjct: 68  VNGETKILSVDRGIRFPVLASKLSTVCGGGDGGGGEVTFKYQLPGEDLDALISVTNDDDL 127

Query: 142 ENMIDEYDRTASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSD-DWFLNALN 188
           E+M+ EYDR    SS    KP+R+RLFLFP     S   G   +SST SD D F+ ALN
Sbjct: 128 EHMMHEYDRLLRLSS----KPARMRLFLFP----ASSGFGS--QSSTQSDRDRFVEALN 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004135079.10.0e+00100.00RNA polymerase II degradation factor 1 [Cucumis sativus] >KGN52111.1 hypothetica... [more]
XP_008446641.10.0e+0097.74PREDICTED: RNA polymerase II degradation factor 1 [Cucumis melo] >KAA0034588.1 R... [more]
XP_038892018.10.0e+0095.36putative mediator of RNA polymerase II transcription subunit 12 [Benincasa hispi... [more]
XP_022956700.10.0e+0089.31putative uncharacterized protein DDB_G0268364 isoform X2 [Cucurbita moschata][more]
XP_022966093.10.0e+0087.01RNA polymerase II degradation factor 1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWH30.0e+00100.00PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610450 PE=4 SV... [more]
A0A5A7SVC40.0e+0097.74RNA polymerase II degradation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BF260.0e+0097.74RNA polymerase II degradation factor 1 OS=Cucumis melo OX=3656 GN=LOC103489312 P... [more]
A0A6J1GYH70.0e+0089.31PB1 domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111458340 PE=4... [more]
A0A6J1HQW40.0e+0087.01RNA polymerase II degradation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
Match NameE-valueIdentityDescription
AT2G01190.15.6e-16249.61Octicosapeptide/Phox/Bem1p family protein [more]
AT3G18230.11.0e-8638.24Octicosapeptide/Phox/Bem1p family protein [more]
AT4G05150.14.4e-3440.36Octicosapeptide/Phox/Bem1p family protein [more]
AT5G09620.15.1e-3046.82Octicosapeptide/Phox/Bem1p family protein [more]
AT5G64430.15.1e-3048.04Octicosapeptide/Phox/Bem1p family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainSMARTSM00666PB1_newcoord: 66..160
e-value: 2.0E-29
score: 113.7
IPR000270PB1 domainPFAMPF00564PB1coord: 69..159
e-value: 4.6E-17
score: 61.7
IPR000270PB1 domainPROSITEPS51745PB1coord: 51..160
score: 13.286085
NoneNo IPR availableGENE3D3.10.20.90coord: 69..158
e-value: 1.2E-10
score: 43.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..496
NoneNo IPR availablePANTHERPTHR31066OS05G0427100 PROTEIN-RELATEDcoord: 13..699
NoneNo IPR availablePANTHERPTHR31066:SF27EXPRESSED PROTEINcoord: 13..699
NoneNo IPR availableCDDcd06410PB1_UP2coord: 55..158
e-value: 6.498E-48
score: 162.004
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 67..167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G034630.1CsaV3_5G034630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding