CsaV3_5G034460 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G034460
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	zinc finger protein 6
Location	chr5: 27403536 .. 27404742 (-)
RNA-Seq Expression	CsaV3_5G034460
Synteny	CsaV3_5G034460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATAAATAAACCCTCCATGCATTCTAACTTCTTACACATTCCCTCCCTCCATTTTCCACTATTTACTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTTTTCCAAATTTAAAGACATTAATTAATTAATGGCTGATTTGATCCAAACTAAATCAAACTCTACTACCCCTTTCAAATTAAAACTCTTCGGCTTTGATGTTCGAGAAGATCAATTAGAAGATGATGATTCCGCCGCTAAAACCCCAACTGGCTCATCGGAATCCGGCGTATTTACCCCTTCTACCGACCGGAAATACGAGTGTCAATATTGTTGCCGTGAATTTGCCAATTCACAAGCCCTCGGCGGCCACCAAAACGCTCATAAAAAGGAAAGGCAGCAGCTTAAGCGTGCTCAATTACAAGCCACTCGAAACGCCGCCGTCGCCTACGTTAGAAACCCAATTATCTCCGCCTTTGCTCCTCCCCCTCACCTTCTTGCCACCGCCGCCCCCGCCGCCGCCCCTCCCGGCGGCCAGTTCCTCCTCCCTAACCCAGCCACCGCCGGAACCTCCTCTTCTTGGGTTTACATGCCACGTACCCAGCCCCCGACGATCCACGTATCCTCACATGGGTGTGTCTTTCCGACAGCCGGCGGCGGTGGTACGTCGGCGATGTTGTCGGCGTACGGCGGTGGAGTTGGGAATTCGATGGCATTCACGATGGGACCTCAAGTAGAGGGGGTTTCGTTAAAGAGATTTAGCAAAGGGGAAAATGGATCGGGTTTTGATGAGGGAATTGGGTTGGATTTGCATTTGAGATTGGCTCCGGCGGCGCCATGAAAACGAGTCGAGAGTTGCGAGTTCCAACTCGGTTGATCTTAAATTTTATTCCTACGTTTTTTGTGTATGCAAAATTTTTCAAAAACCCTTGTGGGAATCTTTGTACATTCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTATTTATTATTATTATAATTATTAATCTGATCCATCTCCCTCGAAAAATATTAAAACACATTTGTTCATTCCTCCGATGTGAAATGTCGATGATCATTAATTTCAAACTTACAACCACTCCATAATCATTTTTTTTTTCTTCTACCTTTTTCTAAATTATCGTTTTATGTGCAATAATTGAACAATTGAAAGAATTTATTATATTTATTTTAGAAGAAATTTTATGTATATTGA

mRNA sequence

ATGGCTGATTTGATCCAAACTAAATCAAACTCTACTACCCCTTTCAAATTAAAACTCTTCGGCTTTGATGTTCGAGAAGATCAATTAGAAGATGATGATTCCGCCGCTAAAACCCCAACTGGCTCATCGGAATCCGGCGTATTTACCCCTTCTACCGACCGGAAATACGAGTGTCAATATTGTTGCCGTGAATTTGCCAATTCACAAGCCCTCGGCGGCCACCAAAACGCTCATAAAAAGGAAAGGCAGCAGCTTAAGCGTGCTCAATTACAAGCCACTCGAAACGCCGCCGTCGCCTACGTTAGAAACCCAATTATCTCCGCCTTTGCTCCTCCCCCTCACCTTCTTGCCACCGCCGCCCCCGCCGCCGCCCCTCCCGGCGGCCAGTTCCTCCTCCCTAACCCAGCCACCGCCGGAACCTCCTCTTCTTGGGTTTACATGCCACGTACCCAGCCCCCGACGATCCACGTATCCTCACATGGGTGTGTCTTTCCGACAGCCGGCGGCGGTGGTACGTCGGCGATGTTGTCGGCGTACGGCGGTGGAGTTGGGAATTCGATGGCATTCACGATGGGACCTCAAGTAGAGGGGGTTTCGTTAAAGAGATTTAGCAAAGGGGAAAATGGATCGGGTTTTGATGAGGGAATTGGGTTGGATTTGCATTTGAGATTGGCTCCGGCGGCGCCATGA

Coding sequence (CDS)

ATGGCTGATTTGATCCAAACTAAATCAAACTCTACTACCCCTTTCAAATTAAAACTCTTCGGCTTTGATGTTCGAGAAGATCAATTAGAAGATGATGATTCCGCCGCTAAAACCCCAACTGGCTCATCGGAATCCGGCGTATTTACCCCTTCTACCGACCGGAAATACGAGTGTCAATATTGTTGCCGTGAATTTGCCAATTCACAAGCCCTCGGCGGCCACCAAAACGCTCATAAAAAGGAAAGGCAGCAGCTTAAGCGTGCTCAATTACAAGCCACTCGAAACGCCGCCGTCGCCTACGTTAGAAACCCAATTATCTCCGCCTTTGCTCCTCCCCCTCACCTTCTTGCCACCGCCGCCCCCGCCGCCGCCCCTCCCGGCGGCCAGTTCCTCCTCCCTAACCCAGCCACCGCCGGAACCTCCTCTTCTTGGGTTTACATGCCACGTACCCAGCCCCCGACGATCCACGTATCCTCACATGGGTGTGTCTTTCCGACAGCCGGCGGCGGTGGTACGTCGGCGATGTTGTCGGCGTACGGCGGTGGAGTTGGGAATTCGATGGCATTCACGATGGGACCTCAAGTAGAGGGGGTTTCGTTAAAGAGATTTAGCAAAGGGGAAAATGGATCGGGTTTTGATGAGGGAATTGGGTTGGATTTGCATTTGAGATTGGCTCCGGCGGCGCCATGA

Protein sequence

MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAAPAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYGGGVGNSMAFTMGPQVEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP*

Homology

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BLAST of CsaV3_5G034460 vs. NCBI nr
Match: XP_004135395.1 (zinc finger protein GIS3 [Cucumis sativus] >KGN52096.1 hypothetical protein Csa_008508 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 2.4e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60
           MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY
Sbjct: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60

Query: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120
           CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA
Sbjct: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120

Query: 121 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180
           PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG
Sbjct: 121 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180

Query: 181 GGVGNSMAFTMGPQVEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           GGVGNSMAFTMGPQVEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP
Sbjct: 181 GGVGNSMAFTMGPQVEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 229

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BLAST of CsaV3_5G034460 vs. NCBI nr
Match: XP_008446614.1 (PREDICTED: zinc finger protein 6 [Cucumis melo])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 221/230 (96.09%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60
           MAD  QTKSN+TTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY
Sbjct: 33  MAD-FQTKSNATTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 92

Query: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120
           CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAT A
Sbjct: 93  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATTA 152

Query: 121 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180
            AAAPPGGQFLLPNPATAGTSSSWVYMPRT PPTIHVSSHGCVFPTAGGGGTSAMLSAYG
Sbjct: 153 SAAAPPGGQFLLPNPATAGTSSSWVYMPRTPPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 212

Query: 181 GGVGNSMAFTMGPQ-VEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           GGVGNSMAFTMGPQ VEGVSLKRFSKGENG GFD+GIGLDLHLRLAPAAP
Sbjct: 213 GGVGNSMAFTMGPQVVEGVSLKRFSKGENGPGFDDGIGLDLHLRLAPAAP 261

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BLAST of CsaV3_5G034460 vs. NCBI nr
Match: KAA0034570.1 (zinc finger protein 6 [Cucumis melo var. makuwa] >TYK09122.1 zinc finger protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 221/230 (96.09%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60
           MAD  QTKSN+TTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY
Sbjct: 1   MAD-FQTKSNATTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60

Query: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120
           CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAT A
Sbjct: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATTA 120

Query: 121 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180
            AAAPPGGQFLLPNPATAGTSSSWVYMPRT PPTIHVSSHGCVFPTAGGGGTSAMLSAYG
Sbjct: 121 SAAAPPGGQFLLPNPATAGTSSSWVYMPRTPPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180

Query: 181 GGVGNSMAFTMGPQ-VEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           GGVGNSMAFTMGPQ VEGVSLKRFSKGENG GFD+GIGLDLHLRLAPAAP
Sbjct: 181 GGVGNSMAFTMGPQVVEGVSLKRFSKGENGPGFDDGIGLDLHLRLAPAAP 229

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BLAST of CsaV3_5G034460 vs. NCBI nr
Match: XP_038893165.1 (zinc finger protein GIS3 [Benincasa hispida])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 209/233 (89.70%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60
           MAD  Q KSN TTPFKLKLFGFDVRE +LEDDDSAAKTPTGSSESGVFTPS DRKYECQY
Sbjct: 1   MAD-FQAKSN-TTPFKLKLFGFDVRE-ELEDDDSAAKTPTGSSESGVFTPSADRKYECQY 60

Query: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120
           CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA
Sbjct: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120

Query: 121 PAAAPPGGQFLLPNPATAGT-SSSWVYMPRTQPPTIHVSSHGCVFPTAGG---GGTSAML 180
           P      GQFLLPNPATAGT SSSWVYMPRT PP IHVSSHGCVFPT+GG   GGT+AML
Sbjct: 121 PP-----GQFLLPNPATAGTPSSSWVYMPRTGPPPIHVSSHGCVFPTSGGGGXGGTAAML 180

Query: 181 SAYGGGVGNSMAFTMGPQVEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           S+YGGGVGNSMAFTMG QVEGVSLKRFSKGENGSGFD+GIGLDLHLRLAPAAP
Sbjct: 181 SSYGGGVGNSMAFTMGTQVEGVSLKRFSKGENGSGFDDGIGLDLHLRLAPAAP 225

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BLAST of CsaV3_5G034460 vs. NCBI nr
Match: XP_022985471.1 (zinc finger protein GIS3-like [Cucurbita maxima])

HSP 1 Score: 347.8 bits (891), Expect = 7.1e-92
Identity = 183/230 (79.57%), Postives = 196/230 (85.22%), Query Frame = 0


Query: 6   QTKSNSTTP----FKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYC 65
           Q+K N TTP     KLKLFGFDVRE+  +DD + AKTPTGSSESGVFTPS DRKYECQYC
Sbjct: 9   QSKPNHTTPTTTRLKLKLFGFDVREELEDDDSTTAKTPTGSSESGVFTPSADRKYECQYC 68

Query: 66  CREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAAP 125
           CREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATA P
Sbjct: 69  CREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAPP 128

Query: 126 AAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYGG 185
                   FLL NPA+A  +SSWVYMPRT PP I VSSHGCVFP +GGGG +AM+S+YG 
Sbjct: 129 -------HFLLSNPASAAETSSWVYMPRT-PPPIQVSSHGCVFPASGGGGKAAMVSSYGR 188

Query: 186 GVGNSMAFTMGPQV--EGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           GVGNSMAF MG Q+  EG+SLKRF+KGENGSGFDEGIGLDLHLRLAPAAP
Sbjct: 189 GVGNSMAFAMGSQIHDEGLSLKRFTKGENGSGFDEGIGLDLHLRLAPAAP 230

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BLAST of CsaV3_5G034460 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-41
Identity = 117/254 (46.06%), Postives = 141/254 (55.51%), Query Frame = 0


Query: 9   SNSTTPFKLKLFGFDV-REDQLEDDDSAAKTPTGSSESGVFTPST--------------- 68
           S+ TT  +LKLFGF V  E+   D        + S E G F   +               
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 69  ---DRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAV---------AY 128
              +RKYECQYCCREF NSQALGGHQNAHKKERQQLKRAQLQATRNAA           +
Sbjct: 67  GGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQF 126

Query: 129 VRNPIISAFAPPPHLLATAAPAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSH 188
           +RNPI+SAFAPPPHLL+++A    P GG               W+Y+PR  P  +HV SH
Sbjct: 127 LRNPIVSAFAPPPHLLSSSA-VPQPMGG--------------PWMYLPRVSPSQLHV-SH 186

Query: 189 GCVFPTAGGGGTSAMLSAYGGGVGNSMAFTMGPQVEGV-------SLKRFSKGENGSGFD 228
           GCV    G GG  A   +Y  G  +S    +G Q+  V       S+  FS+ E G+ FD
Sbjct: 187 GCVIQD-GSGGAGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFD 242

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BLAST of CsaV3_5G034460 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.8e-27
Identity = 101/226 (44.69%), Postives = 121/226 (53.54%), Query Frame = 0


Query: 11  STTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREFANSQA 70
           +T    LKLFG ++ E     + S+   P   S SG    S  RKYECQYCCREFANSQA
Sbjct: 2   ATETSSLKLFGINLLETTSVQNQSSEPRP--GSGSG----SESRKYECQYCCREFANSQA 61

Query: 71  LGGHQNAHKKERQQLKRAQLQATRNAAVAY----VRNPIISAFAPPPHLLATAAPAAAPP 130
           LGGHQNAHKKERQ LKRAQ+ ATR     +      NP++SAFAP PHLL+       PP
Sbjct: 62  LGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLS----QPHPP 121

Query: 131 GGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYGGGVGNS 190
               L P    + +SS W+Y         H+SS   V    GG G       YGGG+  S
Sbjct: 122 PHMMLSP----SSSSSKWLYGE-------HMSSQNAVGYFHGGRG------LYGGGM-ES 181

Query: 191 MAFTMGPQVEGVSL---KRF---SKGENGSGFDEGIGLDLHLRLAP 227
           MA  +  +  G SL   +RF   S   +G   + GIGLDLHL L P
Sbjct: 182 MAGEV--KTHGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

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BLAST of CsaV3_5G034460 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.7e-14
Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 6   QTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREF 65
           ++ S S++   +KLFGF++       + + A++ + S+ +   T    +++ECQYC +EF
Sbjct: 12  ESSSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLT--VMKRHECQYCGKEF 71

Query: 66  ANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRN---PIISAF 110
           ANSQALGGHQNAHKKER + KR QLQA R +   Y+ N   PI ++F
Sbjct: 72  ANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

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BLAST of CsaV3_5G034460 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 38/100 (38.00%), Postives = 55/100 (55.00%), Query Frame = 0


Query: 3   DLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCC 62
           D +   S S     ++LFGF   E     ++S +K     +   +   + +++++C YC 
Sbjct: 5   DFMNVNSFSPKERPIRLFGF---EFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCF 64

Query: 63  REFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVR 103
           R F  SQALGGHQNAHK+ERQQ KR  L +  NAA  + R
Sbjct: 65  RNFPTSQALGGHQNAHKRERQQTKRFNLHS--NAAAFFHR 99

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BLAST of CsaV3_5G034460 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-07
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 25  REDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREFANSQALGGHQNAHKKERQQ 84
           +E++ E+D       TG + +   + S +R++EC YC R F  SQALGGHQNAHK+ERQ 
Sbjct: 66  KEEEEEEDQ------TGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQL 122

Query: 85  LKR 88
            KR
Sbjct: 126 AKR 122

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BLAST of CsaV3_5G034460 vs. ExPASy TrEMBL
Match: A0A0A0KWG4 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609820 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60
           MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY
Sbjct: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60

Query: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120
           CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA
Sbjct: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120

Query: 121 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180
           PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG
Sbjct: 121 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180

Query: 181 GGVGNSMAFTMGPQVEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           GGVGNSMAFTMGPQVEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP
Sbjct: 181 GGVGNSMAFTMGPQVEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 229

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BLAST of CsaV3_5G034460 vs. ExPASy TrEMBL
Match: A0A5D3CCU7 (Zinc finger protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001130 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117
Identity = 221/230 (96.09%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60
           MAD  QTKSN+TTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY
Sbjct: 1   MAD-FQTKSNATTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60

Query: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120
           CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAT A
Sbjct: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATTA 120

Query: 121 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180
            AAAPPGGQFLLPNPATAGTSSSWVYMPRT PPTIHVSSHGCVFPTAGGGGTSAMLSAYG
Sbjct: 121 SAAAPPGGQFLLPNPATAGTSSSWVYMPRTPPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180

Query: 181 GGVGNSMAFTMGPQ-VEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           GGVGNSMAFTMGPQ VEGVSLKRFSKGENG GFD+GIGLDLHLRLAPAAP
Sbjct: 181 GGVGNSMAFTMGPQVVEGVSLKRFSKGENGPGFDDGIGLDLHLRLAPAAP 229

[Close]

BLAST of CsaV3_5G034460 vs. ExPASy TrEMBL
Match: A0A1S3BGA5 (zinc finger protein 6 OS=Cucumis melo OX=3656 GN=LOC103489296 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117
Identity = 221/230 (96.09%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MADLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 60
           MAD  QTKSN+TTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY
Sbjct: 33  MAD-FQTKSNATTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 92

Query: 61  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 120
           CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAT A
Sbjct: 93  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATTA 152

Query: 121 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 180
            AAAPPGGQFLLPNPATAGTSSSWVYMPRT PPTIHVSSHGCVFPTAGGGGTSAMLSAYG
Sbjct: 153 SAAAPPGGQFLLPNPATAGTSSSWVYMPRTPPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 212

Query: 181 GGVGNSMAFTMGPQ-VEGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           GGVGNSMAFTMGPQ VEGVSLKRFSKGENG GFD+GIGLDLHLRLAPAAP
Sbjct: 213 GGVGNSMAFTMGPQVVEGVSLKRFSKGENGPGFDDGIGLDLHLRLAPAAP 261

[Close]

BLAST of CsaV3_5G034460 vs. ExPASy TrEMBL
Match: A0A6J1J893 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111483443 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.4e-92
Identity = 183/230 (79.57%), Postives = 196/230 (85.22%), Query Frame = 0


Query: 6   QTKSNSTTP----FKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYC 65
           Q+K N TTP     KLKLFGFDVRE+  +DD + AKTPTGSSESGVFTPS DRKYECQYC
Sbjct: 9   QSKPNHTTPTTTRLKLKLFGFDVREELEDDDSTTAKTPTGSSESGVFTPSADRKYECQYC 68

Query: 66  CREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAAP 125
           CREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATA P
Sbjct: 69  CREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAPP 128

Query: 126 AAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYGG 185
                   FLL NPA+A  +SSWVYMPRT PP I VSSHGCVFP +GGGG +AM+S+YG 
Sbjct: 129 -------HFLLSNPASAAETSSWVYMPRT-PPPIQVSSHGCVFPASGGGGKAAMVSSYGR 188

Query: 186 GVGNSMAFTMGPQV--EGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
           GVGNSMAF MG Q+  EG+SLKRF+KGENGSGFDEGIGLDLHLRLAPAAP
Sbjct: 189 GVGNSMAFAMGSQIHDEGLSLKRFTKGENGSGFDEGIGLDLHLRLAPAAP 230

[Close]

BLAST of CsaV3_5G034460 vs. ExPASy TrEMBL
Match: A0A6J1H115 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111458592 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.2e-91
Identity = 181/231 (78.35%), Postives = 196/231 (84.85%), Query Frame = 0


Query: 5   IQTKSNSTTP----FKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQY 64
           IQ+K N TTP     KLKLFGFDVRE+  +DD + AKTPTGSSESGVFTPSTDRKYECQY
Sbjct: 37  IQSKPNHTTPTTTRLKLKLFGFDVREELEDDDSTTAKTPTGSSESGVFTPSTDRKYECQY 96

Query: 65  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAA 124
           CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATA 
Sbjct: 97  CCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAP 156

Query: 125 PAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYG 184
           P        FLL NPA+A  +SSWVYMPRT PP I +SSHGC FP +GG G +AM+S+YG
Sbjct: 157 P-------HFLLSNPASAPETSSWVYMPRT-PPPIQMSSHGCAFPASGGAGKAAMVSSYG 216

Query: 185 GGVGNSMAFTMGPQV--EGVSLKRFSKGENGSGFDEGIGLDLHLRLAPAAP 230
            GVGNSMAF MG Q+  EG+SLKRF+KGENGSGFD+GIGLDLHLRLAPAAP
Sbjct: 217 RGVGNSMAFAMGSQIHDEGISLKRFTKGENGSGFDDGIGLDLHLRLAPAAP 259

[Close]

BLAST of CsaV3_5G034460 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 8.4e-43
Identity = 117/254 (46.06%), Postives = 141/254 (55.51%), Query Frame = 0


Query: 9   SNSTTPFKLKLFGFDV-REDQLEDDDSAAKTPTGSSESGVFTPST--------------- 68
           S+ TT  +LKLFGF V  E+   D        + S E G F   +               
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 69  ---DRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAV---------AY 128
              +RKYECQYCCREF NSQALGGHQNAHKKERQQLKRAQLQATRNAA           +
Sbjct: 67  GGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQF 126

Query: 129 VRNPIISAFAPPPHLLATAAPAAAPPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSH 188
           +RNPI+SAFAPPPHLL+++A    P GG               W+Y+PR  P  +HV SH
Sbjct: 127 LRNPIVSAFAPPPHLLSSSA-VPQPMGG--------------PWMYLPRVSPSQLHV-SH 186

Query: 189 GCVFPTAGGGGTSAMLSAYGGGVGNSMAFTMGPQVEGV-------SLKRFSKGENGSGFD 228
           GCV    G GG  A   +Y  G  +S    +G Q+  V       S+  FS+ E G+ FD
Sbjct: 187 GCVIQD-GSGGAGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFD 242

[Close]

BLAST of CsaV3_5G034460 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 122.9 bits (307), Expect = 3.4e-28
Identity = 101/226 (44.69%), Postives = 121/226 (53.54%), Query Frame = 0


Query: 11  STTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREFANSQA 70
           +T    LKLFG ++ E     + S+   P   S SG    S  RKYECQYCCREFANSQA
Sbjct: 2   ATETSSLKLFGINLLETTSVQNQSSEPRP--GSGSG----SESRKYECQYCCREFANSQA 61

Query: 71  LGGHQNAHKKERQQLKRAQLQATRNAAVAY----VRNPIISAFAPPPHLLATAAPAAAPP 130
           LGGHQNAHKKERQ LKRAQ+ ATR     +      NP++SAFAP PHLL+       PP
Sbjct: 62  LGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLS----QPHPP 121

Query: 131 GGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYGGGVGNS 190
               L P    + +SS W+Y         H+SS   V    GG G       YGGG+  S
Sbjct: 122 PHMMLSP----SSSSSKWLYGE-------HMSSQNAVGYFHGGRG------LYGGGM-ES 181

Query: 191 MAFTMGPQVEGVSL---KRF---SKGENGSGFDEGIGLDLHLRLAP 227
           MA  +  +  G SL   +RF   S   +G   + GIGLDLHL L P
Sbjct: 182 MAGEV--KTHGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of CsaV3_5G034460 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 79.7 bits (195), Expect = 3.3e-15
Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 6   QTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREF 65
           ++ S S++   +KLFGF++       + + A++ + S+ +   T    +++ECQYC +EF
Sbjct: 12  ESSSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLT--VMKRHECQYCGKEF 71

Query: 66  ANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRN---PIISAF 110
           ANSQALGGHQNAHKKER + KR QLQA R +   Y+ N   PI ++F
Sbjct: 72  ANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of CsaV3_5G034460 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 38/100 (38.00%), Postives = 55/100 (55.00%), Query Frame = 0


Query: 3   DLIQTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCC 62
           D +   S S     ++LFGF   E     ++S +K     +   +   + +++++C YC 
Sbjct: 5   DFMNVNSFSPKERPIRLFGF---EFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCF 64

Query: 63  REFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVR 103
           R F  SQALGGHQNAHK+ERQQ KR  L +  NAA  + R
Sbjct: 65  RNFPTSQALGGHQNAHKRERQQTKRFNLHS--NAAAFFHR 99

[Close]

BLAST of CsaV3_5G034460 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-08
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 25  REDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREFANSQALGGHQNAHKKERQQ 84
           +E++ E+D       TG + +   + S +R++EC YC R F  SQALGGHQNAHK+ERQ 
Sbjct: 66  KEEEEEEDQ------TGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQL 122

Query: 85  LKR 88
            KR
Sbjct: 126 AKR 122

The following BLAST results are available for this feature:

BLAST of CsaV3_5G034460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135395.1	2.4e-124	100.00	zinc finger protein GIS3 [Cucumis sativus] >KGN52096.1 hypothetical protein Csa_...	[more]
XP_008446614.1	2.2e-117	96.09	PREDICTED: zinc finger protein 6 [Cucumis melo]	[more]
KAA0034570.1	2.2e-117	96.09	zinc finger protein 6 [Cucumis melo var. makuwa] >TYK09122.1 zinc finger protein...	[more]
XP_038893165.1	1.2e-104	89.70	zinc finger protein GIS3 [Benincasa hispida]	[more]
XP_022985471.1	7.1e-92	79.57	zinc finger protein GIS3-like [Cucurbita maxima]	[more]

BLAST of CsaV3_5G034460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9H1	1.2e-41	46.06	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	4.8e-27	44.69	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q39264	4.7e-14	42.99	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	1.6e-09	38.00	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
Q84WI0	2.5e-07	47.62	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]

BLAST of CsaV3_5G034460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWG4	1.2e-124	100.00	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609820 P...	[more]
A0A5D3CCU7	1.1e-117	96.09	Zinc finger protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold47...	[more]
A0A1S3BGA5	1.1e-117	96.09	zinc finger protein 6 OS=Cucumis melo OX=3656 GN=LOC103489296 PE=4 SV=1	[more]
A0A6J1J893	3.4e-92	79.57	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111483443 PE=4 S...	[more]
A0A6J1H115	2.2e-91	78.35	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111458592 PE=4...	[more]

BLAST of CsaV3_5G034460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68360.1	8.4e-43	46.06	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	3.4e-28	44.69	zinc finger protein 6	[more]
AT1G10480.1	3.3e-15	42.99	zinc finger protein 5	[more]
AT5G06650.1	1.1e-10	38.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G58070.1	1.8e-08	47.62	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 42..103 e-value: 1.3E-7 score: 33.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..50
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 7..229
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 7..229
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 58..78
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 56..83 score: 11.572346
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 53..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G034460.1	CsaV3_5G034460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010090	trichome morphogenesis