CsaV3_5G034400 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G034400
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	VQ domain-containing protein
Location	chr5: 27371161 .. 27372349 (+)
RNA-Seq Expression	CsaV3_5G034400
Synteny	CsaV3_5G034400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCCACCAAAATCTTCCGAAATCAATGGCCCTCGCCCTTCTCCTCTCTTAATCCACAACCATTCTCGTCTTATTCGTAAGCCCGTCCAGCTCCGGCAGCCACTCATCATTTACACCCATTCCCCCAAAATCATCCACACCCACCCTAAGGATTTCATGGCATTGGTTCAACGCCTCACTGGCTGCAACCCACCACCGCCGCTGCCGCTGCCGTCTGCCAAACCCTCCTTGTCGGAGAGAAATTTGAACGACAACGATTCATCGTCGGGTGTGACGACGGAGGAGGATATTAATGAAAAACAGAGTAATTGTTCTGTTCTTAAATATTCTTCTCATGATGTTACGACGCCGTTTTCCTCCCCTGCTTTCCTTAGCTCCTCCTTATCCCCTTCTTTCATGGACTTTCTTAAAGCCCTCCCCGAATTTTAATTCTTCTTCATCTTCTTCCCAATTCTCTCTGTTTTCTTACATTTTTTCTTTTTTACTTTCCTTTGGAATTACAGATTGTATAATTGTTAATTACTTACACACAAGAATTCAATTCATTCTTTGATTACTGTTTTTCTTTTTCTTTTTACATTTTTCAATTTAGTTGTTTCTGCTTGAAGATTTGATGAATGATCTGGGTTTGAGTTTGCTTTGTTGGTTTATATTGTTAATTGATTTATTGGGTATCTGATGAAGATGGATTATCCACCCTATTGTAATTAATCCATTCTTAATAATGTTTGTTTAAAAGTCAACTTGCTTAAATTTATTAAAAACCATATATTTATATACATCATTTTAATTAATTAATTTTACTATATTTGATATATTAAAAAGGTTTTGAATGAAATAATGTATATAACTTATTCCTAGAAGTTAAGAGGGGGTGGAGTTGTTATTTGTTGAGCACACCTTGTATTACTATAGACTAAAGAAGTATGTGATGGGTCCATAGGATTGAATTCTAACCTTATTATAATTTCCTCTTCCTTTCTTTTGTGTTATACTTTCTTGTTTTATATTTTATTTTAATCTAAACTTTTTAGTCTAACTCTCTGTTTTGACCATGTGATTATGACTTTTAATTTATCTTATTATTAAAAGTCAAATATGAAATGTGTGTAATACTTGGATTATGATCAAATATTTGACATCTAAATTTGAATATTGGTTAATTTTTTGCTTAGATAAACCCTAA

mRNA sequence

ATGAGCCCACCAAAATCTTCCGAAATCAATGGCCCTCGCCCTTCTCCTCTCTTAATCCACAACCATTCTCGTCTTATTCGTAAGCCCGTCCAGCTCCGGCAGCCACTCATCATTTACACCCATTCCCCCAAAATCATCCACACCCACCCTAAGGATTTCATGGCATTGGTTCAACGCCTCACTGGCTGCAACCCACCACCGCCGCTGCCGCTGCCGTCTGCCAAACCCTCCTTGTCGGAGAGAAATTTGAACGACAACGATTCATCGTCGGGTGTGACGACGGAGGAGGATATTAATGAAAAACAGAATAAACCCTAA

Coding sequence (CDS)

ATGAGCCCACCAAAATCTTCCGAAATCAATGGCCCTCGCCCTTCTCCTCTCTTAATCCACAACCATTCTCGTCTTATTCGTAAGCCCGTCCAGCTCCGGCAGCCACTCATCATTTACACCCATTCCCCCAAAATCATCCACACCCACCCTAAGGATTTCATGGCATTGGTTCAACGCCTCACTGGCTGCAACCCACCACCGCCGCTGCCGCTGCCGTCTGCCAAACCCTCCTTGTCGGAGAGAAATTTGAACGACAACGATTCATCGTCGGGTGTGACGACGGAGGAGGATATTAATGAAAAACAGAATAAACCCTAA

Protein sequence

MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQNKP*

Homology

[Close]

BLAST of CsaV3_5G034400 vs. NCBI nr
Match: KGN52621.2 (hypothetical protein Csa_008052 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60
           MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL
Sbjct: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60

Query: 61  TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQNKP 106
           TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQNKP
Sbjct: 61  TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQNKP 105

[Close]

BLAST of CsaV3_5G034400 vs. NCBI nr
Match: XP_008466850.1 (PREDICTED: VQ motif-containing protein 8, chloroplastic-like [Cucumis melo] >KAA0034563.1 VQ motif-containing protein 8 [Cucumis melo var. makuwa] >TYK09116.1 VQ motif-containing protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 2.4e-34
Identity = 82/103 (79.61%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60
           MSPPKSS+ING RPSPLLIHN SRL+RKP QLRQPLIIYTHSPKIIHTHPKDFMALVQRL
Sbjct: 1   MSPPKSSQINGLRPSPLLIHNDSRLVRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60

Query: 61  TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQN 104
           TG NPPPP P         ERN NDNDS+SGVT+EED+NEKQ+
Sbjct: 61  TGFNPPPPQP---------ERNSNDNDSTSGVTSEEDVNEKQS 93

[Close]

BLAST of CsaV3_5G034400 vs. NCBI nr
Match: XP_038893302.1 (VQ motif-containing protein 8, chloroplastic [Benincasa hispida])

HSP 1 Score: 152.9 bits (385), Expect = 1.5e-33
Identity = 82/101 (81.19%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60
           MSPPKS EINGPRPSPLLIH  SR IRKP QLRQP+IIYTHSPKIIHT PKDFMALVQRL
Sbjct: 1   MSPPKSCEINGPRPSPLLIHKDSRFIRKP-QLRQPVIIYTHSPKIIHTQPKDFMALVQRL 60

Query: 61  TGCNPPPPLPLPSA-KPSLSERNLNDNDSSSGVTTEEDINE 101
           TG NPPPP P  +A   S SERN NDNDSSSG+TTEE+INE
Sbjct: 61  TGFNPPPPPPPSNALSLSFSERNFNDNDSSSGLTTEEEINE 100

[Close]

BLAST of CsaV3_5G034400 vs. NCBI nr
Match: XP_022150646.1 (VQ motif-containing protein 8, chloroplastic [Momordica charantia])

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26
Identity = 74/107 (69.16%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRK-PVQLRQPLIIYTHSPKIIHTHPKDFMALVQR 60
           MSP KS +INGPRPSPLLIH HSRLIRK P QLRQPLIIYTHSPKIIHT PKDFMALVQR
Sbjct: 1   MSPAKSCDINGPRPSPLLIHKHSRLIRKPPPQLRQPLIIYTHSPKIIHTQPKDFMALVQR 60

Query: 61  LTGCNPPPPLPLPSAKPSLSERNLN-DNDSSSGVTTEEDINEKQNKP 106
           LTG  PPPP   P A  S    N+N DNDSSS +T E +  +  + P
Sbjct: 61  LTGFTPPPP---PHADDSDRNNNVNFDNDSSSVLTEEVNCGDHNHHP 104

[Close]

BLAST of CsaV3_5G034400 vs. NCBI nr
Match: KAG7013019.1 (VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118.2 bits (295), Expect = 4.2e-23
Identity = 65/102 (63.73%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRK---PVQLRQPLIIYTHSPKIIHTHPKDFMALV 60
           MSPPK   I+GPRP PLL+H HSR IRK   P QLR+P+IIYTHSPKIIHT PKDFMALV
Sbjct: 1   MSPPKPRHIHGPRPPPLLLHKHSRTIRKPSPPPQLRRPVIIYTHSPKIIHTQPKDFMALV 60

Query: 61  QRLTGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDIN 100
           QRLTGC+PP     PS           DN+ SS V TEED N
Sbjct: 61  QRLTGCSPPNADKAPS-----------DNNDSSSVVTEEDSN 91

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-09
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRK---------PVQLRQPLIIYTHSPKIIHTHPK 60
           M P + +EING RPS L +   S  I+K         P     P+IIY HSPK+IHT  +
Sbjct: 1   MIPTRCNEINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAE 60

Query: 61  DFMALVQRLTGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQ 103
           DFMALVQRLTG +         +  S+    +N  D ++     +D  ++Q
Sbjct: 61  DFMALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDNTAAPFSQDRTQRQ 111

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-09
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 12  PRPSPLLIHNHSRLIRKP---------VQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG 63
           P P  L ++  S +I+KP          + R P+IIYTH+P+IIHT+PKDFMALVQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-07
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 8  EINGPRPSPLLIHNHSRLIRKPVQ---------------LRQPLIIYTHSPKIIHTHPKD 63
          +I GPRPSPL +H  S  I+KP +                R+P++IY  SPK++H    +
Sbjct: 23 QICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHATASE 82

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.8e-06
Identity = 33/82 (40.24%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 4  PKSSEINGPRPSPLLIHNHS-RLIRK-----------PVQLRQ-----------PLIIYT 63
          P+S    GP+P+PL +   S ++I+K           P Q  Q           P+ IYT
Sbjct: 6  PRSRGNMGPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYT 65

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy TrEMBL
Match: A0A0A0KT78 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609750 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.7e-50
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60
           MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL
Sbjct: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60

Query: 61  TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQN 104
           TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQ+
Sbjct: 61  TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQS 103

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy TrEMBL
Match: A0A5D3CFH5 (VQ motif-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001070 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34
Identity = 82/103 (79.61%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60
           MSPPKSS+ING RPSPLLIHN SRL+RKP QLRQPLIIYTHSPKIIHTHPKDFMALVQRL
Sbjct: 1   MSPPKSSQINGLRPSPLLIHNDSRLVRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60

Query: 61  TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQN 104
           TG NPPPP P         ERN NDNDS+SGVT+EED+NEKQ+
Sbjct: 61  TGFNPPPPQP---------ERNSNDNDSTSGVTSEEDVNEKQS 93

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy TrEMBL
Match: A0A1S3CS67 (VQ motif-containing protein 8, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103504155 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34
Identity = 82/103 (79.61%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60
           MSPPKSS+ING RPSPLLIHN SRL+RKP QLRQPLIIYTHSPKIIHTHPKDFMALVQRL
Sbjct: 1   MSPPKSSQINGLRPSPLLIHNDSRLVRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRL 60

Query: 61  TGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQN 104
           TG NPPPP P         ERN NDNDS+SGVT+EED+NEKQ+
Sbjct: 61  TGFNPPPPQP---------ERNSNDNDSTSGVTSEEDVNEKQS 93

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy TrEMBL
Match: A0A6J1DC48 (VQ motif-containing protein 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018730 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.8e-27
Identity = 74/107 (69.16%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRK-PVQLRQPLIIYTHSPKIIHTHPKDFMALVQR 60
           MSP KS +INGPRPSPLLIH HSRLIRK P QLRQPLIIYTHSPKIIHT PKDFMALVQR
Sbjct: 1   MSPAKSCDINGPRPSPLLIHKHSRLIRKPPPQLRQPLIIYTHSPKIIHTQPKDFMALVQR 60

Query: 61  LTGCNPPPPLPLPSAKPSLSERNLN-DNDSSSGVTTEEDINEKQNKP 106
           LTG  PPPP   P A  S    N+N DNDSSS +T E +  +  + P
Sbjct: 61  LTGFTPPPP---PHADDSDRNNNVNFDNDSSSVLTEEVNCGDHNHHP 104

[Close]

BLAST of CsaV3_5G034400 vs. ExPASy TrEMBL
Match: J3MPK0 (VQ domain-containing protein OS=Oryza brachyantha OX=4533 GN=102709301 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.6e-12
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 6  SSEINGPRPSPLLIHNHSRLIRKPVQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGC-- 65
          S E+ GPRP+PL +   S  IRKP QLRQP+IIYT SPK++H +P DFM++VQRLTG   
Sbjct: 14 SREMQGPRPAPLKVSKDSHKIRKPQQLRQPVIIYTMSPKVVHANPADFMSVVQRLTGAPR 73

Query: 66 --NPPPPLPL 72
             PP  LPL
Sbjct: 74 TTAPPATLPL 83

[Close]

BLAST of CsaV3_5G034400 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 63.9 bits (154), Expect = 8.7e-11
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 1   MSPPKSSEINGPRPSPLLIHNHSRLIRK---------PVQLRQPLIIYTHSPKIIHTHPK 60
           M P + +EING RPS L +   S  I+K         P     P+IIY HSPK+IHT  +
Sbjct: 1   MIPTRCNEINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAE 60

Query: 61  DFMALVQRLTGCNPPPPLPLPSAKPSLSERNLNDNDSSSGVTTEEDINEKQ 103
           DFMALVQRLTG +         +  S+    +N  D ++     +D  ++Q
Sbjct: 61  DFMALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDNTAAPFSQDRTQRQ 111

[Close]

BLAST of CsaV3_5G034400 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 12  PRPSPLLIHNHSRLIRKP---------VQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG 63
           P P  L ++  S +I+KP          + R P+IIYTH+P+IIHT+PKDFMALVQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of CsaV3_5G034400 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 58.2 bits (139), Expect = 4.8e-09
Identity = 37/82 (45.12%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 4  PKSSEINGPRPSPLLIHNHS-RLIRK-----------PVQLRQ-----------PLIIYT 63
          P+S  I GPRP PL +   S ++I+K           P Q  Q           P+IIYT
Sbjct: 6  PRSRGILGPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYT 65

[Close]

BLAST of CsaV3_5G034400 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 8  EINGPRPSPLLIHNHSRLIRKPVQ---------------LRQPLIIYTHSPKIIHTHPKD 63
          +I GPRPSPL +H  S  I+KP +                R+P++IY  SPK++H    +
Sbjct: 23 QICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHATASE 82

[Close]

BLAST of CsaV3_5G034400 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 52.0 bits (123), Expect = 3.4e-07
Identity = 33/82 (40.24%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 4  PKSSEINGPRPSPLLIHNHS-RLIRK-----------PVQLRQ-----------PLIIYT 63
          P+S    GP+P+PL +   S ++I+K           P Q  Q           P+ IYT
Sbjct: 6  PRSRGNMGPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYT 65

The following BLAST results are available for this feature:

BLAST of CsaV3_5G034400 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52621.2	1.3e-51	100.00	hypothetical protein Csa_008052 [Cucumis sativus]	[more]
XP_008466850.1	2.4e-34	79.61	PREDICTED: VQ motif-containing protein 8, chloroplastic-like [Cucumis melo] >KAA...	[more]
XP_038893302.1	1.5e-33	81.19	VQ motif-containing protein 8, chloroplastic [Benincasa hispida]	[more]
XP_022150646.1	1.8e-26	69.16	VQ motif-containing protein 8, chloroplastic [Momordica charantia]	[more]
KAG7013019.1	4.2e-23	63.73	VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma su...	[more]

BLAST of CsaV3_5G034400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA36	1.2e-09	36.94	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9LS54	2.7e-09	51.67	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q8LGD5	2.6e-07	41.43	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
F4HWF9	4.8e-06	40.24	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of CsaV3_5G034400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT78	5.7e-50	99.03	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609750 PE=4 SV=...	[more]
A0A5D3CFH5	1.1e-34	79.61	VQ motif-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CS67	1.1e-34	79.61	VQ motif-containing protein 8, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1DC48	8.8e-27	69.16	VQ motif-containing protein 8, chloroplastic OS=Momordica charantia OX=3673 GN=L...	[more]
J3MPK0	1.6e-12	58.57	VQ domain-containing protein OS=Oryza brachyantha OX=4533 GN=102709301 PE=4 SV=1	[more]

BLAST of CsaV3_5G034400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68450.1	8.7e-11	36.94	VQ motif-containing protein	[more]
AT3G18360.1	1.9e-10	51.67	VQ motif-containing protein	[more]
AT1G21326.1	4.8e-09	45.12	VQ motif-containing protein	[more]
AT3G18690.1	1.8e-08	41.43	MAP kinase substrate 1	[more]
AT1G21320.1	3.4e-07	40.24	nucleotide binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 40..67 e-value: 3.9E-13 score: 48.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..96
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 6..95
IPR039833	VQ motif-containing protein 8, chloroplastic	PANTHER	PTHR33143:SF42	VQ MOTIF-CONTAINING PROTEIN 8, CHLOROPLASTIC	coord: 6..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G034400.1	CsaV3_5G034400.1	mRNA