CsaV3_5G033490 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATACAAGCGCGTACCGGTAATCATAGTCGACAGAACAGAACAGAACGAAACGAAAAGAGAAACCGAAGAAGAAGAAGGAGTCAATGGAGGATTTATGGAAGAGAGCAAAATCCTTCGCAGAAGAAGCGGCTAAGAAGTCCCAAACCTTAACCTCCACCTCCACACTCTCCGAATTGGTCTCTGAAACTGCCAAAAAATCCAAGGAGCTCGCCGCCGAGGCCTCCAAGACTGCCGATCTCATCAAAACCGCCGCCATCAAGCAAGCCGATCAACTCAAATCACTCAATGTCTCCGACATTATCCCTCCTCAATTCTCTTCCATTTCCATTCCTAATTTCTCTGTTCCTTCTCATCATTCTCAGTCTGAGCTTGAAAAGTTTGGCCTCAACGACGATCTGAGAGATTTTGTCAGAGGATTTACTCCCACTACTTTCCAGAACTTTCCGATCCAAGGTAGGAGCATTTGCATCGGTTTTTTTTTTAGGATTTCTGAATTGTTCTTATGCGTAATCGATGTGGATTGTTTTTATTATTAATGTAGACGAACCGGATGCGTCGGACGTTGCGGTTACGTCCTCGAATGTGCGTAAGGATCTGACGGAATGGCAAGAACAGCACGCCACGTTGGTTCTCACTAATGTCAAGGTGAAATCAAAATGGTTTATATCCTAGTAATTTTAGTTGAATTCGATCAAATCATGCAATAATTGGCTAGGAATTTCCTGTCTCTAATGATTTTTCGAACCATTTATCATTCTGGGATCTTGCGCCATTTTATTTGTTTTAAACAACATTTTGTAGATTATTGAAAGATGTACGATTGAATGTGGTTTGTACCAAGCACAATCCTTCAATTCAACTAAATCACGATTCGGCTGAAAACTTTGGTTTTGATTTTCTGTCTATTGCTTTTCTAAATTTGTATCTGATCTTTATGGCACTTCACGAACTCTTGCTACTTTCAAAAGTTATTGTTGGCGTCCAGCTTTTTCTGTATATTTAATTCTTAGTGGTGTCTCCCACATGGTTATTAGTGAAATGGATCTCTTTCTCTTTCTCGAGAACTTGTGCGACAAGCAACACTTGGGAAATGGGAAAAAGAACCGTTCTTTGCTTATGGACCGCTACAATTGCTTTGCTTGTTCATTTCACATCTTTCAAGAACGGGTATCAACTAGCCTTGTCTGAAGATGTATTTTGCTAGTATTTGGGAAATCCAAACCTTCCCTGTGGTAATGCCGAAAGCTGAAAGGTTATTTCAAGAATTTTAGTTACTATCGACCTAAATGATGCATAAATCTTACACTCGGACTCAGAAGACACTAATGAATTTAGCTGCACTTGATTTATCTGTTAGTTCAGAGTTGTTAGCCTTTGTCCGGTTTCATCATCAAGAGTAGATCGAAGATCATAGCCTTTATATTTGTCCCCGGCATGTTAACTATAATTGAATATTATTTTCATCCCAACACAATTTTAAAAATGCCTCTATTCTTATTTCTTTTGCAGGAAATTTCAAGATTAAGATATGAACTATGTCCAAGAATTATGAAAGAAAGGATATTCTGGAGGATATATTTTACACTTATCAGCAGTCATGTTGCTCCGTAAGTTGCAATTGTTTAATTAATTTAGCTCCATTGTTTCTTATCGTGTTTTCAAAGAAATATGCCACCACATGCCAAGCATTTAATACAGTGTTTCTACCGTCTCGAGAAATTTAATTGTCGACTTCACCATTGTGGAAAACAGTTTCAAGGATTTTACGAGCTTCCTGTTTCATCTTTATTAATTTAACCTCCTTACTATGTCTAACTTATTGAAGTATCTGATTTCTTGTTGAATGTGTACGTACACCTATTTGGCTTACATAGATAATACATGAGGTTTTTTGCCTTTTGCTTTTTTGTTTTGTATTTGCTAAAAAATACATTAGATTAAAATGAATATTTTAGTGTATCGTGGATTGCTAAGGCCCCAATAGATTGGTACCCATCATTTTATAGCCCACCCCGCTTGAACTACACATGAGAAAAAACTGAAAAATATTTTTAAAAAAGAAGTAAAAAAAGCTTGCCACGAAAATTAGGTGAAGAAAGAATGCCCCTAAATATTTTAAATAGGTTATTACATTTTCAGGCATAAGAGTATTTAGGACTTATGGAAGCTTTACAATAGTTATATAGCCTGACGTAATATACCATTTAGAATTTGGCGAATGAATTGTATCGATCTAATTTTTTTAATCTTATCATCGAAAGATTCTGTTATAGTAGTTTTAGCACCTAATGGTTACAAAACACAGATACGAGAAAAAGTACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAGAAAAGCCGATGAAGCCAAGCAAACTCCGTTGGTTGGAGCCTCTGAAAAAACTGAAGGGCCGGAAAAGAACCCGAAGGGTATAGCTTCCAAATCGTCGTCTGCGGAACAAGACTTGGATACTTTTCTTTTGGGAGATCTTGAAGACAGCGACGCCGAAGGTGCAGGTAATGTATATCATGGCTTCGGGCTCTTCCGTCACCAAATTTCTTACCCCAGAATCTAGTTTAGTCTCATGGCGAGTGACTTTTTGAAAATTGTTATTCTGAAGTGTGGATGCTAAACTATACTCTTAACAGCATGCTCCTTCTCAACTTATATTTAACGTTTTCATTTTTCTTTTTCCAGATGATGGCAACGAAAGCTTCGATGATGACTTTGACAAGATCGAAAACTCGGTATGTTTCTGCTTCTTCATTTGGTCTTCCTACAGAATCATAGTATGTCAATTTCCAATCTTAAACTGATCTGCAAAACTAACTTCATGGCTCTGCATGCAGGATGTCGATGAAGAAAATTCCAAGGCAAAAGCCATAAGTAGTTAGAATGTGAAGTACAAGGAGAAGAAGATGGGGTTTTTAATAGGATCGTGGCCTTGGCTTATTGACAAAAAGAATGGGCTGTTGAGAAGAAAGTGAAGGTGAATACTAATACCATATCGAAGTGTACTGCAGTTCAGGCTCTTTCATAACCAAAAATAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTGTTGTTTGTAGAGAAATACCCGCAAGTTTTTACTCCTTATCGATTCTATTCAATTGTATAAACAACGCTGCCATTGATAAACAACTGACTCTCTATATAGTGTATTGGGGATGGCTGGTTTTCCCTTGCTCGAACTTGTACAGAATTTACACAATTACTTTCTCAAATTCGATTGTGTTGTTTTACATTTCAGAAGATGGAATTTTTCTTGCAGATTTCAACTCTATTTTCTGTTGGTTTTCATTTTTATATTTCACTTCCAGAAATTAAGAAAAGTAATGGTCGAATCTTCCCG ATGGAGGATTTATGGAAGAGAGCAAAATCCTTCGCAGAAGAAGCGGCTAAGAAGTCCCAAACCTTAACCTCCACCTCCACACTCTCCGAATTGGTCTCTGAAACTGCCAAAAAATCCAAGGAGCTCGCCGCCGAGGCCTCCAAGACTGCCGATCTCATCAAAACCGCCGCCATCAAGCAAGCCGATCAACTCAAATCACTCAATGTCTCCGACATTATCCCTCCTCAATTCTCTTCCATTTCCATTCCTAATTTCTCTGTTCCTTCTCATCATTCTCAGTCTGAGCTTGAAAAGTTTGGCCTCAACGACGATCTGAGAGATTTTGTCAGAGGATTTACTCCCACTACTTTCCAGAACTTTCCGATCCAAGACGAACCGGATGCGTCGGACGTTGCGGTTACGTCCTCGAATGTGCGTAAGGATCTGACGGAATGGCAAGAACAGCACGCCACGTTGGTTCTCACTAATGTCAAGGAAATTTCAAGATTAAGATATGAACTATGTCCAAGAATTATGAAAGAAAGGATATTCTGGAGGATATATTTTACACTTATCAGCAGTCATGTTGCTCCATACGAGAAAAAGTACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAGAAAAGCCGATGAAGCCAAGCAAACTCCGTTGGTTGGAGCCTCTGAAAAAACTGAAGGGCCGGAAAAGAACCCGAAGGGTATAGCTTCCAAATCGTCGTCTGCGGAACAAGACTTGGATACTTTTCTTTTGGGAGATCTTGAAGACAGCGACGCCGAAGGTGCAGATGATGGCAACGAAAGCTTCGATGATGACTTTGACAAGATCGAAAACTCGGATGTCGATGAAGAAAATTCCAAGGCAAAAGCCATAAGTAGTTAG ATGGAGGATTTATGGAAGAGAGCAAAATCCTTCGCAGAAGAAGCGGCTAAGAAGTCCCAAACCTTAACCTCCACCTCCACACTCTCCGAATTGGTCTCTGAAACTGCCAAAAAATCCAAGGAGCTCGCCGCCGAGGCCTCCAAGACTGCCGATCTCATCAAAACCGCCGCCATCAAGCAAGCCGATCAACTCAAATCACTCAATGTCTCCGACATTATCCCTCCTCAATTCTCTTCCATTTCCATTCCTAATTTCTCTGTTCCTTCTCATCATTCTCAGTCTGAGCTTGAAAAGTTTGGCCTCAACGACGATCTGAGAGATTTTGTCAGAGGATTTACTCCCACTACTTTCCAGAACTTTCCGATCCAAGACGAACCGGATGCGTCGGACGTTGCGGTTACGTCCTCGAATGTGCGTAAGGATCTGACGGAATGGCAAGAACAGCACGCCACGTTGGTTCTCACTAATGTCAAGGAAATTTCAAGATTAAGATATGAACTATGTCCAAGAATTATGAAAGAAAGGATATTCTGGAGGATATATTTTACACTTATCAGCAGTCATGTTGCTCCATACGAGAAAAAGTACATGGAAGAGATTAAGCTGAAGTCTGAAGAACAAAGAAAAGCCGATGAAGCCAAGCAAACTCCGTTGGTTGGAGCCTCTGAAAAAACTGAAGGGCCGGAAAAGAACCCGAAGGGTATAGCTTCCAAATCGTCGTCTGCGGAACAAGACTTGGATACTTTTCTTTTGGGAGATCTTGAAGACAGCGACGCCGAAGGTGCAGATGATGGCAACGAAAGCTTCGATGATGACTTTGACAAGATCGAAAACTCGGATGTCGATGAAGAAAATTCCAAGGCAAAAGCCATAAGTAGTTAG MEDLWKRAKSFAEEAAKKSQTLTSTSTLSELVSETAKKSKELAAEASKTADLIKTAAIKQADQLKSLNVSDIIPPQFSSISIPNFSVPSHHSQSELEKFGLNDDLRDFVRGFTPTTFQNFPIQDEPDASDVAVTSSNVRKDLTEWQEQHATLVLTNVKEISRLRYELCPRIMKERIFWRIYFTLISSHVAPYEKKYMEEIKLKSEEQRKADEAKQTPLVGASEKTEGPEKNPKGIASKSSSAEQDLDTFLLGDLEDSDAEGADDGNESFDDDFDKIENSDVDEENSKAKAISS* Homology
BLAST of CsaV3_5G033490 vs. NCBI nr
Match: XP_031741277.1 (uncharacterized protein LOC101210244 [Cucumis sativus] >KGN51997.1 hypothetical protein Csa_008145 [Cucumis sativus]) HSP 1 Score: 542.3 bits (1396), Expect = 2.5e-150 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. NCBI nr
Match: XP_008446477.1 (PREDICTED: uncharacterized protein LOC103489201 isoform X1 [Cucumis melo] >KAA0034487.1 uncharacterized protein E6C27_scaffold65G004990 [Cucumis melo var. makuwa] >TYK09041.1 uncharacterized protein E5676_scaffold475G00270 [Cucumis melo var. makuwa]) HSP 1 Score: 521.9 bits (1343), Expect = 3.5e-144 Identity = 283/293 (96.59%), Postives = 287/293 (97.95%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. NCBI nr
Match: XP_038893418.1 (uncharacterized protein LOC120082213 [Benincasa hispida]) HSP 1 Score: 503.8 bits (1296), Expect = 9.8e-139 Identity = 273/293 (93.17%), Postives = 282/293 (96.25%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. NCBI nr
Match: XP_022957329.1 (uncharacterized protein LOC111458760 [Cucurbita moschata]) HSP 1 Score: 486.5 bits (1251), Expect = 1.6e-133 Identity = 267/293 (91.13%), Postives = 277/293 (94.54%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. NCBI nr
Match: XP_023526810.1 (uncharacterized protein LOC111790168 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481.5 bits (1238), Expect = 5.2e-132 Identity = 265/293 (90.44%), Postives = 275/293 (93.86%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. ExPASy TrEMBL
Match: A0A0A0KUC1 (BSD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G606870 PE=4 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. ExPASy TrEMBL
Match: A0A5A7SYX9 (BSD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00270 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144 Identity = 283/293 (96.59%), Postives = 287/293 (97.95%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. ExPASy TrEMBL
Match: A0A1S3BF51 (uncharacterized protein LOC103489201 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489201 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144 Identity = 283/293 (96.59%), Postives = 287/293 (97.95%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. ExPASy TrEMBL
Match: A0A6J1H1M5 (uncharacterized protein LOC111458760 OS=Cucurbita moschata OX=3662 GN=LOC111458760 PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 7.9e-134 Identity = 267/293 (91.13%), Postives = 277/293 (94.54%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. ExPASy TrEMBL
Match: A0A6J1IPK1 (uncharacterized protein LOC111477659 OS=Cucurbita maxima OX=3661 GN=LOC111477659 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 6.2e-131 Identity = 264/293 (90.10%), Postives = 273/293 (93.17%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. TAIR 10
Match: AT1G26300.1 (BSD domain-containing protein ) HSP 1 Score: 278.9 bits (712), Expect = 4.8e-75 Identity = 175/324 (54.01%), Postives = 221/324 (68.21%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. TAIR 10
Match: AT1G69030.1 (BSD domain-containing protein ) HSP 1 Score: 274.6 bits (701), Expect = 9.0e-74 Identity = 178/326 (54.60%), Postives = 221/326 (67.79%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. TAIR 10
Match: AT1G26300.2 (BSD domain-containing protein ) HSP 1 Score: 202.6 bits (514), Expect = 4.4e-52 Identity = 120/222 (54.05%), Postives = 150/222 (67.57%), Query Frame = 0
BLAST of CsaV3_5G033490 vs. TAIR 10
Match: AT3G24820.1 (BSD domain-containing protein ) HSP 1 Score: 103.2 bits (256), Expect = 3.6e-22 Identity = 63/163 (38.65%), Postives = 95/163 (58.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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