CsaV3_5G033190 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCCTCTCCTTCTCTTTCTTCCTCGTCCTCGTCTTTTTCTGCCATTGGCCACCTCTTCATCATGATCATCTTGATAGTTCTACTCATCTTCGTCACCTCGTCCTCTTCCACAGCCATGCCAGATGCTTCTCCGACCACCTCTCTCCCCGAACTGCAGCTTCATCCTTGTGATGCTCTCACCCATGAAACCTCACGTTCTTTGTGTATTCATCTTCATACAGTTTACCAACATCGCCTACCTGTTCATGTCCTGCCGCCGTTGTTGACACGTAATGAGATTGATCCTCGGTACGGTGTTGAGAAGAGACTCGTGCCATCGGGGCCAAACCCTCTTCACAACTGA ATGAAAGCCTCTCCTTCTCTTTCTTCCTCGTCCTCGTCTTTTTCTGCCATTGGCCACCTCTTCATCATGATCATCTTGATAGTTCTACTCATCTTCGTCACCTCGTCCTCTTCCACAGCCATGCCAGATGCTTCTCCGACCACCTCTCTCCCCGAACTGCAGCTTCATCCTTGTGATGCTCTCACCCATGAAACCTCACGTTCTTTGTGTATTCATCTTCATACAGTTTACCAACATCGCCTACCTGTTCATGTCCTGCCGCCGTTGTTGACACGTAATGAGATTGATCCTCGGTACGGTGTTGAGAAGAGACTCGTGCCATCGGGGCCAAACCCTCTTCACAACTGA ATGAAAGCCTCTCCTTCTCTTTCTTCCTCGTCCTCGTCTTTTTCTGCCATTGGCCACCTCTTCATCATGATCATCTTGATAGTTCTACTCATCTTCGTCACCTCGTCCTCTTCCACAGCCATGCCAGATGCTTCTCCGACCACCTCTCTCCCCGAACTGCAGCTTCATCCTTGTGATGCTCTCACCCATGAAACCTCACGTTCTTTGTGTATTCATCTTCATACAGTTTACCAACATCGCCTACCTGTTCATGTCCTGCCGCCGTTGTTGACACGTAATGAGATTGATCCTCGGTACGGTGTTGAGAAGAGACTCGTGCCATCGGGGCCAAACCCTCTTCACAACTGA MKASPSLSSSSSSFSAIGHLFIMIILIVLLIFVTSSSSTAMPDASPTTSLPELQLHPCDALTHETSRSLCIHLHTVYQHRLPVHVLPPLLTRNEIDPRYGVEKRLVPSGPNPLHN* Homology
BLAST of CsaV3_5G033190 vs. NCBI nr
Match: KGN51967.1 (hypothetical protein Csa_008419 [Cucumis sativus]) HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. NCBI nr
Match: KAA0034462.1 (inactive protein FON2 SPARE1-like [Cucumis melo var. makuwa]) HSP 1 Score: 217.2 bits (552), Expect = 7.3e-53 Identity = 110/115 (95.65%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. NCBI nr
Match: XP_038891849.1 (CLAVATA3/ESR (CLE)-related protein 10-like [Benincasa hispida]) HSP 1 Score: 170.6 bits (431), Expect = 7.8e-39 Identity = 96/122 (78.69%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. NCBI nr
Match: KAG7032247.1 (CLAVATA3/ESR (CLE)-related protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 138.3 bits (347), Expect = 4.3e-29 Identity = 84/129 (65.12%), Postives = 93/129 (72.09%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. NCBI nr
Match: KAG6601466.1 (CLAVATA3/ESR (CLE)-related protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.3 bits (347), Expect = 4.3e-29 Identity = 84/129 (65.12%), Postives = 93/129 (72.09%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy Swiss-Prot
Match: Q9FZE4 (CLAVATA3/ESR (CLE)-related protein 9 OS=Arabidopsis thaliana OX=3702 GN=CLE9 PE=2 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 6.0e-10 Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy Swiss-Prot
Match: Q4PSX1 (CLAVATA3/ESR (CLE)-related protein 10 OS=Arabidopsis thaliana OX=3702 GN=CLE10 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-09 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy Swiss-Prot
Match: Q6NMF0 (CLAVATA3/ESR (CLE)-related protein 13 OS=Arabidopsis thaliana OX=3702 GN=CLE13 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 9.0e-06 Identity = 41/109 (37.61%), Postives = 54/109 (49.54%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy Swiss-Prot
Match: Q29PU4 (CLAVATA3/ESR (CLE)-related protein 12 OS=Arabidopsis thaliana OX=3702 GN=CLE12 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 4.5e-05 Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy Swiss-Prot
Match: A2X462 (Protein FON2 SPARE1 OS=Oryza sativa subsp. indica OX=39946 GN=FOS1 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.2e-04 Identity = 17/22 (77.27%), Postives = 22/22 (100.00%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy TrEMBL
Match: A0A0A0KU71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606580 PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy TrEMBL
Match: A0A5A7STL1 (Inactive protein FON2 SPARE1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004730 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 3.5e-53 Identity = 110/115 (95.65%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy TrEMBL
Match: A0A6J1D4I0 (CLAVATA3/ESR (CLE)-related protein 9-like OS=Momordica charantia OX=3673 GN=LOC111017522 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27 Identity = 75/112 (66.96%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy TrEMBL
Match: A0A7N2LAQ0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 5.0e-15 Identity = 63/125 (50.40%), Postives = 79/125 (63.20%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. ExPASy TrEMBL
Match: A0A7N2L9Y9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 5.5e-14 Identity = 62/125 (49.60%), Postives = 77/125 (61.60%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. TAIR 10
Match: AT1G26600.1 (CLAVATA3/ESR-RELATED 9 ) HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11 Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. TAIR 10
Match: AT1G69320.1 (CLAVATA3/ESR-RELATED 10 ) HSP 1 Score: 62.4 bits (150), Expect = 2.8e-10 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. TAIR 10
Match: AT1G73965.1 (CLAVATA3/ESR-RELATED 13 ) HSP 1 Score: 51.2 bits (121), Expect = 6.4e-07 Identity = 41/109 (37.61%), Postives = 54/109 (49.54%), Query Frame = 0
BLAST of CsaV3_5G033190 vs. TAIR 10
Match: AT1G68795.1 (CLAVATA3/ESR-RELATED 12 ) HSP 1 Score: 48.9 bits (115), Expect = 3.2e-06 Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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