CsaV3_5G032850 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G032850
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transcription termination factor MTEF1, chloroplastic
Location	chr5: 26462281 .. 26463207 (-)
RNA-Seq Expression	CsaV3_5G032850
Synteny	CsaV3_5G032850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGCAGACTCCCACTTCCTCCCTCAAGCTTCTTCTTCTTCTTCTTTCCTCCCTCATTGGCCGGGTCTCTTAAACCTTTGACAAACCCTAGTTTCAGAAAACCTCGTTTCACCCTTTCTCTCGATACCCAATTTTCTGACCGCTTCGACTCCGGCCTACTTTTCCGTGAGAAAATACTCTACCTTGAGAACCACCTCAATGTCGATTCCCGCAAAGCCTTCCGGGAGAATCCCCATTGTCGCTCTGCTACTCTCTCCACTCTCAAATCCGTCGAGGTCTGTCTCTCTTCCATGGGACTTGACCGATCTGCAGTCAGCCGCGTTCTCGATATGCACCCCAAACTCCTGACCTCGAATCCGGACTATGATATTTACCCCATCTTTGATTTTCTTCTTAATGAAGTTGAAATTCCATTTCCCGACATTCGTAAATCTATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCATCAATTGCGACCTGCTTTGAAGTTCTTGCGTGACCTGGGTTTTGTTGGGTTGAAAGCCATCACGTGCCAGACGACATTGCTACTGGTTTCGAGTGTTGAACATACCCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCATGAGGATGTGGTTAATATGGTGTTAAGGTCTCCGGGTTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGAGTTATTTCTTAGGAGACATGAAGGGTGATTTGTTGGAATTGAAACGGTTTCCGCAATATTTTTCGTTTAACTTGGAGAGGAAGATTAAGCTGCGTCATCGTTCACTGGTTGAACATGGTTTGTCACTTCCTTTGTCGAAAATGCTGAAGGCTAGTGACGGGGAGTTCAATGCATGGTTGATAGAAATGCGGTGCAGTTCGTTGATGGCTGATCGTTGA

mRNA sequence

ATGATAAGCAGACTCCCACTTCCTCCCTCAAGCTTCTTCTTCTTCTTCTTTCCTCCCTCATTGGCCGGGTCTCTTAAACCTTTGACAAACCCTAGTTTCAGAAAACCTCGTTTCACCCTTTCTCTCGATACCCAATTTTCTGACCGCTTCGACTCCGGCCTACTTTTCCGTGAGAAAATACTCTACCTTGAGAACCACCTCAATGTCGATTCCCGCAAAGCCTTCCGGGAGAATCCCCATTGTCGCTCTGCTACTCTCTCCACTCTCAAATCCGTCGAGGTCTGTCTCTCTTCCATGGGACTTGACCGATCTGCAGTCAGCCGCGTTCTCGATATGCACCCCAAACTCCTGACCTCGAATCCGGACTATGATATTTACCCCATCTTTGATTTTCTTCTTAATGAAGTTGAAATTCCATTTCCCGACATTCGTAAATCTATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCATCAATTGCGACCTGCTTTGAAGTTCTTGCGTGACCTGGGTTTTGTTGGGTTGAAAGCCATCACGTGCCAGACGACATTGCTACTGGTTTCGAGTGTTGAACATACCCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCATGAGGATGTGGTTAATATGGTGTTAAGGTCTCCGGGTTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGAGTTATTTCTTAGGAGACATGAAGGGTGATTTGTTGGAATTGAAACGGTTTCCGCAATATTTTTCGTTTAACTTGGAGAGGAAGATTAAGCTGCGTCATCGTTCACTGGTTGAACATGGTTTGTCACTTCCTTTGTCGAAAATGCTGAAGGCTAGTGACGGGGAGTTCAATGCATGGTTGATAGAAATGCGGTGCAGTTCGTTGATGGCTGATCGTTGA

Coding sequence (CDS)

ATGATAAGCAGACTCCCACTTCCTCCCTCAAGCTTCTTCTTCTTCTTCTTTCCTCCCTCATTGGCCGGGTCTCTTAAACCTTTGACAAACCCTAGTTTCAGAAAACCTCGTTTCACCCTTTCTCTCGATACCCAATTTTCTGACCGCTTCGACTCCGGCCTACTTTTCCGTGAGAAAATACTCTACCTTGAGAACCACCTCAATGTCGATTCCCGCAAAGCCTTCCGGGAGAATCCCCATTGTCGCTCTGCTACTCTCTCCACTCTCAAATCCGTCGAGGTCTGTCTCTCTTCCATGGGACTTGACCGATCTGCAGTCAGCCGCGTTCTCGATATGCACCCCAAACTCCTGACCTCGAATCCGGACTATGATATTTACCCCATCTTTGATTTTCTTCTTAATGAAGTTGAAATTCCATTTCCCGACATTCGTAAATCTATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCATCAATTGCGACCTGCTTTGAAGTTCTTGCGTGACCTGGGTTTTGTTGGGTTGAAAGCCATCACGTGCCAGACGACATTGCTACTGGTTTCGAGTGTTGAACATACCCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCATGAGGATGTGGTTAATATGGTGTTAAGGTCTCCGGGTTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGAGTTATTTCTTAGGAGACATGAAGGGTGATTTGTTGGAATTGAAACGGTTTCCGCAATATTTTTCGTTTAACTTGGAGAGGAAGATTAAGCTGCGTCATCGTTCACTGGTTGAACATGGTTTGTCACTTCCTTTGTCGAAAATGCTGAAGGCTAGTGACGGGGAGTTCAATGCATGGTTGATAGAAATGCGGTGCAGTTCGTTGATGGCTGATCGTTGA

Protein sequence

MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMRCSSLMADR*

Homology

[Close]

BLAST of CsaV3_5G032850 vs. NCBI nr
Match: XP_004135172.1 (transcription termination factor MTEF1, chloroplastic [Cucumis sativus] >KAE8648749.1 hypothetical protein Csa_007991 [Cucumis sativus])

HSP 1 Score: 610.1 bits (1572), Expect = 1.0e-170
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI
Sbjct: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL
Sbjct: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR
Sbjct: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300

Query: 301 CSSLMADR 309
           CSSLMADR
Sbjct: 301 CSSLMADR 308

[Close]

BLAST of CsaV3_5G032850 vs. NCBI nr
Match: XP_008446371.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] >KAA0034429.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK17705.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 567.0 bits (1460), Expect = 9.9e-158
Identity = 287/308 (93.18%), Postives = 294/308 (95.45%), Query Frame = 0


Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRL LPP S F FFFPPSLAGSLKPL NPSF KPRFTLSL+TQFSDR DSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSA+LSTLKSVEVCLSSMGLDRSAV RVLDM+PKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEV+IPFPDI KSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELK FPQYFSFNLERKIK RHRSLVEHGLSLPLSKMLK SDGEFNAWL EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 CSSLMADR 309
           C SLMADR
Sbjct: 301 CRSLMADR 308

[Close]

BLAST of CsaV3_5G032850 vs. NCBI nr
Match: XP_038892906.1 (transcription termination factor MTEF1, chloroplastic [Benincasa hispida] >XP_038892907.1 transcription termination factor MTEF1, chloroplastic [Benincasa hispida])

HSP 1 Score: 496.5 bits (1277), Expect = 1.7e-136
Identity = 260/308 (84.42%), Postives = 274/308 (88.96%), Query Frame = 0


Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISR  LPP     F FP S   +LKPL NP+FRKPRF LSL+TQFSD  D+GLLFREKI
Sbjct: 1   MISRFQLPPPC---FLFPRSSFQALKPLRNPNFRKPRFALSLNTQFSDHSDAGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVD RKAFRENP  RSATLST+KSVEVCLSSMGL+ SAV RVLDM+PKLLT+N
Sbjct: 61  LYLENHLNVDFRKAFRENPDSRSATLSTVKSVEVCLSSMGLELSAVGRVLDMYPKLLTAN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYD+YPIFDFLLNEV+IPFPDIRKSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AI
Sbjct: 121 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTT+LLVSSVE TLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLV KV+YFL
Sbjct: 181 TCQTTMLLVSSVERTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVRKVNYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
            DMKGDLLELK FPQYFSF+LERKIK RHRSLV+HGLSLPLSKMLK SDGEF A LIEMR
Sbjct: 241 EDMKGDLLELKIFPQYFSFSLERKIKPRHRSLVQHGLSLPLSKMLKVSDGEFTARLIEMR 300

Query: 301 CSSLMADR 309
             SL ADR
Sbjct: 301 LQSLTADR 305

[Close]

BLAST of CsaV3_5G032850 vs. NCBI nr
Match: XP_022945324.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_022945325.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 476.5 bits (1225), Expect = 1.8e-130
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 1   MISRLP-LPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREK 60
           M+SR+  LPP  +  F FP S A SL PL NP+FRKPRFT+SL++QFSD  D+GLLFR+K
Sbjct: 1   MMSRVQNLPP--WNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQK 60

Query: 61  ILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTS 120
           ILYLENHLNVD RKAFRENP  RSATLS +KSVEVCLSSMGL+ SAV RVLDM+P+LLTS
Sbjct: 61  ILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTS 120

Query: 121 NPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKA 180
           +PDYD+YPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL A
Sbjct: 121 DPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNA 180

Query: 181 ITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF 240
           IT QTTLLLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YF
Sbjct: 181 ITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYF 240

Query: 241 LGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEM 300
           LGDMKGDL EL+RFPQYFSF+LERKIK RHR LVEHGLSL LSKMLK SDGEF A L+EM
Sbjct: 241 LGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEM 300

Query: 301 RCSSLMAD 308
           R  S  AD
Sbjct: 301 RLQSSTAD 306

[Close]

BLAST of CsaV3_5G032850 vs. NCBI nr
Match: KAG7013135.1 (Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.7 bits (1223), Expect = 3.0e-130
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 1   MISRLP-LPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREK 60
           MISR+  LPP  +  F FP S A SL PL NP+FRKPRFT+SL++QFSD  D+GLLFR+K
Sbjct: 1   MISRVQNLPP--WNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQK 60

Query: 61  ILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTS 120
           ILYLENHL+VD RKAFRENP  RSATLS +KSVEVCLSSMGL+ SAV RVLDM+P+LLTS
Sbjct: 61  ILYLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTS 120

Query: 121 NPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKA 180
           +PDYD+YPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL A
Sbjct: 121 DPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNA 180

Query: 181 ITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF 240
           IT QTTLLLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YF
Sbjct: 181 ITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYF 240

Query: 241 LGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEM 300
           LGDMKGDL EL+RFPQYFSF+LERKIK RHR LVEHGLSL LSKMLK SDGEF A L+EM
Sbjct: 241 LGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEM 300

Query: 301 RCSSLMAD 308
           R  S  AD
Sbjct: 301 RLQSSTAD 306

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 309.3 bits (791), Expect = 4.9e-83
Identity = 157/254 (61.81%), Postives = 198/254 (77.95%), Query Frame = 0


Query: 51  DSGLLFREKILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVL 110
           D+G+LFREK++YL++ LNVD  KA R NP  RSA +S++ SVE  LSS GL R AV R+L
Sbjct: 28  DTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRIL 87

Query: 111 DMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLR 170
           DM P LLTS+P+ +I P+  FL NE+ I   DI KSI RCPR+L+S +D+QLRPAL FL+
Sbjct: 88  DMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLK 147

Query: 171 DLGFVGLKAITCQTTLLLVSSVEHTLLPKIQYL-ESLGLSHEDVVNMVLRSPGLLTYSIQ 230
            LGFVG   IT + T+LLVS+VE TL+PKI+YL E LG + E+V  MV+RSP LLTYS+ 
Sbjct: 148 TLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVD 207

Query: 231 NNLVPKVSYFLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASD 290
           NNLVPKV +F+ +M+GD+ ELKRFPQYFSF+LERKIK RHR L EHG+ +PLS+MLK SD
Sbjct: 208 NNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSD 267

Query: 291 GEFNAWLIEMRCSS 304
           G+FN WL+E+R  S
Sbjct: 268 GQFNHWLLELRLRS 280

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16
Identity = 56/209 (26.79%), Postives = 109/209 (52.15%), Query Frame = 0


Query: 70  DSRKAFRENPHCRSATL-STLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNPDYDIYPI 129
           D ++     P     T+ + LK+    L  +G+  S + +++   P L + + +  + P 
Sbjct: 235 DIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPT 294

Query: 130 FDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFL-RDLGFV--GLKAITCQTT 189
             +L+ EV I   D+ K +   P+ILV  LD        FL ++LG     +  +  +  
Sbjct: 295 IRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHP 354

Query: 190 LLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKG 249
            LL  S++   LP+I +L S+G+ + D++ ++     +L+ S+++NL PK  Y + ++  
Sbjct: 355 QLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNN 414

Query: 250 DLLELKRFPQYFSFNLERKIKLRHRSLVE 275
           ++  L ++P Y S +L+++I+ RHR LVE
Sbjct: 415 EVHILTKYPMYLSLSLDQRIRPRHRFLVE 443

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 58/213 (27.23%), Postives = 109/213 (51.17%), Query Frame = 0


Query: 81  CRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLLNEVEIPF 140
           C  +    LK     L ++G+D++  ++++   P +LT +    +    +F L++  +  
Sbjct: 260 CGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQ-KLTSTVEF-LSQTGLTE 319

Query: 141 PDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGF-VGLKAITCQTTLLLVSSVEHTLLPK 200
             I + + RCP I+   ++ +LRP +++ R L   V +    C  T  L  S+E  L P 
Sbjct: 320 EQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGL--SIESNLKPV 379

Query: 201 IQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKRFPQYFSF 260
            ++    G   +++  M+ R   L T+S++ N++PK  YF   M     EL +FPQ+F +
Sbjct: 380 TEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGY 439

Query: 261 NLERKIKLRHRSLVEHGLSLPLSKMLKASDGEF 293
           +L+ +IK R+  +   G+ L L+++L  S  EF
Sbjct: 440 SLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.6e-15
Identity = 62/197 (31.47%), Postives = 100/197 (50.76%), Query Frame = 0


Query: 99  MGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDL 158
           +G+ +  + R+L + P L   + +  I P   F L E+ IP   I   +++ P +L + L
Sbjct: 398 LGIPKEGMKRILVVKPILYCIDLEKTIAPKVRF-LQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 159 DHQLRPALKFLRDLGFVGLK---AITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVN 218
             ++RP + FL     V  K    +      LL  S+   L P ++Y  SLG+    +  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 219 MVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEH 278
           M+   P LL Y++ +NL PK  Y    M   L +L  FP++FS++LER+I  RH  +VE+
Sbjct: 518 MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVEN 577

Query: 279 GLSLPLSKMLKASDGEF 293
            ++  L  ML  +D EF
Sbjct: 578 RVNFKLRYMLACTDEEF 592

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 60/218 (27.52%), Postives = 100/218 (45.87%), Query Frame = 0


Query: 89  LKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNPDYDIYP----IFDFLLNEVEIPFPDIR 148
           +K +   L  +G+ R A +R+++  P +L    D  + P    + DF + E  +P     
Sbjct: 287 IKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLP----- 346

Query: 149 KSIIRCPRILVSDLDHQLRPALKFL--------RDLGFVGLKAITCQTTLLLVSSVEHTL 208
             I + P I+  DL  +L    K L         DLG +       +     VS  E  +
Sbjct: 347 SIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSL------IERMPQFVSLSESPM 406

Query: 209 LPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVS--YFLGDMKGDLLELKRFP 268
           L  I +L   G S +    MV+  P +L  ++    + K+S  YF  +MK  L +L  FP
Sbjct: 407 LKHIDFLTKCGFSIDQTREMVIGCPQVLALNLG---IMKLSFEYFQKEMKRPLQDLVDFP 466

Query: 269 QYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEF 293
            +F++ LE  +K RH+ +++ G+   L+ ML  SD +F
Sbjct: 467 AFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKF 490

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy TrEMBL
Match: A0A0A0KW02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605740 PE=3 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 5.0e-171
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI
Sbjct: 32  MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 91

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN
Sbjct: 92  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 151

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 152 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 211

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL
Sbjct: 212 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 271

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR
Sbjct: 272 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 331

Query: 301 CSSLMADR 309
           CSSLMADR
Sbjct: 332 CSSLMADR 339

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy TrEMBL
Match: A0A5D3D1U5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00330 PE=3 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.8e-158
Identity = 287/308 (93.18%), Postives = 294/308 (95.45%), Query Frame = 0


Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRL LPP S F FFFPPSLAGSLKPL NPSF KPRFTLSL+TQFSDR DSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSA+LSTLKSVEVCLSSMGLDRSAV RVLDM+PKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEV+IPFPDI KSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELK FPQYFSFNLERKIK RHRSLVEHGLSLPLSKMLK SDGEFNAWL EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 CSSLMADR 309
           C SLMADR
Sbjct: 301 CRSLMADR 308

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy TrEMBL
Match: A0A1S3BFK9 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489133 PE=3 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.8e-158
Identity = 287/308 (93.18%), Postives = 294/308 (95.45%), Query Frame = 0


Query: 1   MISRLPLPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREKI 60
           MISRL LPP S F FFFPPSLAGSLKPL NPSF KPRFTLSL+TQFSDR DSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSN 120
           LYLENHLNVDSRKAFRENPHCRSA+LSTLKSVEVCLSSMGLDRSAV RVLDM+PKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180
           PDYDIYPIFDFLLNEV+IPFPDI KSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFL 240
           TCQTTLLLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKV+YFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMR 300
           GDMKGDLLELK FPQYFSFNLERKIK RHRSLVEHGLSLPLSKMLK SDGEFNAWL EMR
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 CSSLMADR 309
           C SLMADR
Sbjct: 301 CRSLMADR 308

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy TrEMBL
Match: A0A6J1G0M2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449597 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 8.6e-131
Identity = 249/308 (80.84%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 1   MISRLP-LPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREK 60
           M+SR+  LPP  +  F FP S A SL PL NP+FRKPRFT+SL++QFSD  D+GLLFR+K
Sbjct: 1   MMSRVQNLPP--WNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQK 60

Query: 61  ILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTS 120
           ILYLENHLNVD RKAFRENP  RSATLS +KSVEVCLSSMGL+ SAV RVLDM+P+LLTS
Sbjct: 61  ILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTS 120

Query: 121 NPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKA 180
           +PDYD+YPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL A
Sbjct: 121 DPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNA 180

Query: 181 ITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF 240
           IT QTTLLLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YF
Sbjct: 181 ITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYF 240

Query: 241 LGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEM 300
           LGDMKGDL EL+RFPQYFSF+LERKIK RHR LVEHGLSL LSKMLK SDGEF A L+EM
Sbjct: 241 LGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEM 300

Query: 301 RCSSLMAD 308
           R  S  AD
Sbjct: 301 RLQSSTAD 306

[Close]

BLAST of CsaV3_5G032850 vs. ExPASy TrEMBL
Match: A0A6J1HTW2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467425 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.6e-129
Identity = 246/308 (79.87%), Postives = 270/308 (87.66%), Query Frame = 0


Query: 1   MISRLP-LPPSSFFFFFFPPSLAGSLKPLTNPSFRKPRFTLSLDTQFSDRFDSGLLFREK 60
           MISR+  LPP +   F FP S   SL P+ NP+FRKPRFT+SL++QFSD  D+GL FR+K
Sbjct: 1   MISRVQNLPPCN--RFLFPRSSTPSLNPMRNPNFRKPRFTISLNSQFSDHSDAGLHFRQK 60

Query: 61  ILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTS 120
           ILYLENHL+VD RKAFRENP  RSATLS +KSVEVCLSSMGL+ SAV RVLDM+P+LLTS
Sbjct: 61  ILYLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTS 120

Query: 121 NPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKA 180
           +PDYD+YPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL A
Sbjct: 121 DPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNA 180

Query: 181 ITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYF 240
           IT QTTLLLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV YF
Sbjct: 181 ITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYF 240

Query: 241 LGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEM 300
           LGDMKGDL EL+RFPQYFSF+LERKIK RHR LVEHGLSL LSKMLK SDGEF A L+EM
Sbjct: 241 LGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEM 300

Query: 301 RCSSLMAD 308
           R  S  AD
Sbjct: 301 RLQSSTAD 306

[Close]

BLAST of CsaV3_5G032850 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 309.3 bits (791), Expect = 3.5e-84
Identity = 157/254 (61.81%), Postives = 198/254 (77.95%), Query Frame = 0


Query: 51  DSGLLFREKILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVL 110
           D+G+LFREK++YL++ LNVD  KA R NP  RSA +S++ SVE  LSS GL R AV R+L
Sbjct: 27  DTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRIL 86

Query: 111 DMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLR 170
           DM P LLTS+P+ +I P+  FL NE+ I   DI KSI RCPR+L+S +D+QLRPAL FL+
Sbjct: 87  DMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLK 146

Query: 171 DLGFVGLKAITCQTTLLLVSSVEHTLLPKIQYL-ESLGLSHEDVVNMVLRSPGLLTYSIQ 230
            LGFVG   IT + T+LLVS+VE TL+PKI+YL E LG + E+V  MV+RSP LLTYS+ 
Sbjct: 147 TLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVD 206

Query: 231 NNLVPKVSYFLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASD 290
           NNLVPKV +F+ +M+GD+ ELKRFPQYFSF+LERKIK RHR L EHG+ +PLS+MLK SD
Sbjct: 207 NNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSD 266

Query: 291 GEFNAWLIEMRCSS 304
           G+FN WL+E+R  S
Sbjct: 267 GQFNHWLLELRLRS 279

[Close]

BLAST of CsaV3_5G032850 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-57
Identity = 116/243 (47.74%), Postives = 167/243 (68.72%), Query Frame = 0


Query: 54  LLFREKILYLENHLNVDSRKAFRENPHCRSATLSTLKSVEVCLSSMGLDRSAVSRVLDMH 113
           L  +EKIL LE  + +DS KA   NP   SA L +++SV   L S G+  + + R+L M 
Sbjct: 53  LQMKEKILCLE-LMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMC 112

Query: 114 PKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLG 173
           PK+LTS+   ++YP+F FL N++ +P    R+ I +CPR+L+S ++ QL+PAL +L+ LG
Sbjct: 113 PKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLG 172

Query: 174 FVGLKAITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLV 233
              L+A+  Q  +LLVSSVEHTL+PK+++LES+G S  + + M+LR P L T+SI+NN  
Sbjct: 173 LKDLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFK 232

Query: 234 PKVSYFLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFN 293
           PK+ YF+ ++KG L  LK FPQYF+F+LE++IK RH   +E GL LPLS MLK++D EF 
Sbjct: 233 PKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFE 292

Query: 294 AWL 297
             L
Sbjct: 293 QLL 294

[Close]

BLAST of CsaV3_5G032850 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 145.2 bits (365), Expect = 8.7e-35
Identity = 101/291 (34.71%), Postives = 152/291 (52.23%), Query Frame = 0


Query: 24  SLKPLTNPS----FRKPRF----TLSLDTQFSDRFDSGLLFREKILYLENHLNVDSRKAF 83
           S KP T+ S    F+ P      + +  T  ++  +S +   EK++YL++ L +D     
Sbjct: 35  SFKPNTSSSSSSFFKSPDIPSLSSTTTTTTTTETLESSI--HEKLIYLDS-LGIDFLTLI 94

Query: 84  RENPHCRSATLSTLKSVEVCLSS--MGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLL 143
             +P   S  LS ++SV   +++  +        R++ M P+LLTS       P+  FLL
Sbjct: 95  NRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLL 154

Query: 144 NEVEI-PFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAITCQTTLLLVSSV 203
            EV +    D+R+++ R PR+L   +DHQLRP L FL+ +G +       + T LL  SV
Sbjct: 155 REVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILD----PHKHTYLLSCSV 214

Query: 204 EHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKR 263
           ++ L+P+I Y E LG S      M  R P L  YSI  N  PK+ Y + +M  D+ E+  
Sbjct: 215 DNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLE 274

Query: 264 FPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEFNAWLIEMRCSS 304
           FPQYFSF+LE +IK RH +    G+  PL  MLK ++  F   L E+ C S
Sbjct: 275 FPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTL-EVCCDS 317

[Close]

BLAST of CsaV3_5G032850 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-34
Identity = 97/280 (34.64%), Postives = 147/280 (52.50%), Query Frame = 0


Query: 24  SLKPLTNPS----FRKPRF----TLSLDTQFSDRFDSGLLFREKILYLENHLNVDSRKAF 83
           S KP T+ S    F+ P      + +  T  ++  +S +   EK++YL++ L +D     
Sbjct: 35  SFKPNTSSSSSSFFKSPDIPSLSSTTTTTTTTETLESSI--HEKLIYLDS-LGIDFLTLI 94

Query: 84  RENPHCRSATLSTLKSVEVCLSS--MGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLL 143
             +P   S  LS ++SV   +++  +        R++ M P+LLTS       P+  FLL
Sbjct: 95  NRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLL 154

Query: 144 NEVEI-PFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAITCQTTLLLVSSV 203
            EV +    D+R+++ R PR+L   +DHQLRP L FL+ +G +       + T LL  SV
Sbjct: 155 REVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILD----PHKHTYLLSCSV 214

Query: 204 EHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSYFLGDMKGDLLELKR 263
           ++ L+P+I Y E LG S      M  R P L  YSI  N  PK+ Y + +M  D+ E+  
Sbjct: 215 DNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLE 274

Query: 264 FPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEF 293
           FPQYFSF+LE +IK RH +    G+  PL  MLK ++  F
Sbjct: 275 FPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307

[Close]

BLAST of CsaV3_5G032850 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-29
Identity = 80/234 (34.19%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 64  ENHLNVDSRKAFRENPHCR--SATLSTLKSVEVCLSSMGLDRSAVSRVLDMHPKLLTSNP 123
           EN  ++ S     +NP     +  LS + S    L S G+      R++ + P+L   +P
Sbjct: 38  ENLRHLSSLGIVPQNPRLAPPANDLSVILSAVNLLKSKGISDEDFPRLVFLCPQLF--SP 97

Query: 124 DYDIY---PIFDFLLNEVEIPFPDIRKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLK 183
            +DI    P+FDFL  E+     + R  I+ CP IL SD+++ LRP L +L++LG   L 
Sbjct: 98  TFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILFSDVEYCLRPTLVYLKELGVRNLN 157

Query: 184 AITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVSY 243
             +     +L + VE  L  K+++L+S+G  HE+   +  R P +  YS+++NL PK  +
Sbjct: 158 RASKTNAHVLNTRVE-KLRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEF 217

Query: 244 FLGDMKGDLLELKRFPQYFSFNLERKIKLRHRSLVEHGLSLPLSKMLKASDGEF 293
            + DM+ +L ELK+FPQYF+F+L ++I+ RH  L +  + + LS+ML   D +F
Sbjct: 218 LVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKF 268

The following BLAST results are available for this feature:

BLAST of CsaV3_5G032850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135172.1	1.0e-170	100.00	transcription termination factor MTEF1, chloroplastic [Cucumis sativus] >KAE8648...	[more]
XP_008446371.1	9.9e-158	93.18	PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] ...	[more]
XP_038892906.1	1.7e-136	84.42	transcription termination factor MTEF1, chloroplastic [Benincasa hispida] >XP_03...	[more]
XP_022945324.1	1.8e-130	80.84	transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_0...	[more]
KAG7013135.1	3.0e-130	80.84	Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma su...	[more]

BLAST of CsaV3_5G032850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X53	4.9e-83	61.81	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9FM80	3.0e-16	26.79	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	1.5e-15	27.23	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	2.6e-15	31.47	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	1.1e-10	27.52	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of CsaV3_5G032850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW02	5.0e-171	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605740 PE=3 SV=1	[more]
A0A5D3D1U5	4.8e-158	93.18	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BFK9	4.8e-158	93.18	transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1G0M2	8.6e-131	80.84	transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3...	[more]
A0A6J1HTW2	3.6e-129	79.87	transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366...	[more]

BLAST of CsaV3_5G032850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03050.1	3.5e-84	61.81	Mitochondrial transcription termination factor family protein	[more]
AT2G34620.1	1.2e-57	47.74	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.1	8.7e-35	34.71	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.2	3.3e-34	34.64	Mitochondrial transcription termination factor family protein	[more]
AT3G18870.1	4.2e-29	34.19	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 72..102 e-value: 2500.0 score: 0.8 coord: 144..175 e-value: 2.9E-4 score: 30.2 coord: 214..246 e-value: 0.038 score: 23.1 coord: 107..139 e-value: 15.0 score: 14.5 coord: 247..278 e-value: 0.008 score: 25.4 coord: 178..209 e-value: 0.35 score: 19.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 70..292 e-value: 2.2E-31 score: 108.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 37..304
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 67..302 e-value: 1.3E-44 score: 154.3
None	No IPR available	PANTHER	PTHR13068:SF36	TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC	coord: 37..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G032850.1	CsaV3_5G032850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding