CsaV3_5G032840 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G032840
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 26460158 .. 26460469 (-)
RNA-Seq ExpressionCsaV3_5G032840
SyntenyCsaV3_5G032840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGAAGGACACGGTTTCTTGCTGCAGAAATGCATCACTGTTCAGTAGTCCAGATTCCAGGGGTACGTTGTCCATTACATTACATGACAAGTTTTGAAGGGTACAGTATGTATGAAAGGCCTTGGGGTCATCTCTGTTTCTCGGGACAACAAATGCAAATGCAAATGCAAAATTTGGGGTCAGCATTCGTCACCTCTGGACCCCTTTACCTTCCTACAATCAATTTGCTCAGACACAGAAAAACAAGAGAGAAGGCATCTGTCCCATTCTTTAATCATTCACCCTCGAAGGATGGGATGAGTTTTTGA

mRNA sequence

ATGAGCCGAAGGACACGGTTTCTTGCTGCAGAAATGCATCACTGTTCAGTAGTCCAGATTCCAGGGGTACGTTGTCCATTACATTACATGACAAGTTTTGAAGGGTACAGTATGTATGAAAGGCCTTGGGGTCATCTCTGTTTCTCGGGACAACAAATGCAAATGCAAATGCAAAATTTGGGGTCAGCATTCGTCACCTCTGGACCCCTTTACCTTCCTACAATCAATTTGCTCAGACACAGAAAAACAAGAGAGAAGGCATCTGTCCCATTCTTTAATCATTCACCCTCGAAGGATGGGATGAGTTTTTGA

Coding sequence (CDS)

ATGAGCCGAAGGACACGGTTTCTTGCTGCAGAAATGCATCACTGTTCAGTAGTCCAGATTCCAGGGGTACGTTGTCCATTACATTACATGACAAGTTTTGAAGGGTACAGTATGTATGAAAGGCCTTGGGGTCATCTCTGTTTCTCGGGACAACAAATGCAAATGCAAATGCAAAATTTGGGGTCAGCATTCGTCACCTCTGGACCCCTTTACCTTCCTACAATCAATTTGCTCAGACACAGAAAAACAAGAGAGAAGGCATCTGTCCCATTCTTTAATCATTCACCCTCGAAGGATGGGATGAGTTTTTGA

Protein sequence

MSRRTRFLAAEMHHCSVVQIPGVRCPLHYMTSFEGYSMYERPWGHLCFSGQQMQMQMQNLGSAFVTSGPLYLPTINLLRHRKTREKASVPFFNHSPSKDGMSF*
Homology
[Close]
BLAST of CsaV3_5G032840 vs. NCBI nr
Match: KAE8648748.1 (hypothetical protein Csa_008209 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 2.0e-54
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MSRRTRFLAAEMHHCSVVQIPGVRCPLHYMTSFEGYSMYERPWGHLCFSGQQMQMQMQNL 60
           MSRRTRFLAAEMHHCSVVQIPGVRCPLHYMTSFEGYSMYERPWGHLCFSGQQMQMQMQNL
Sbjct: 1   MSRRTRFLAAEMHHCSVVQIPGVRCPLHYMTSFEGYSMYERPWGHLCFSGQQMQMQMQNL 60

Query: 61  GSAFVTSGPLYLPTINLLRHRKTREKASVPFFNHSPSKDGMSF 104
           GSAFVTSGPLYLPTINLLRHRKTREKASVPFFNHSPSKDGMSF
Sbjct: 61  GSAFVTSGPLYLPTINLLRHRKTREKASVPFFNHSPSKDGMSF 103

The following BLAST results are available for this feature:
BLAST of CsaV3_5G032840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648748.12.0e-54100.00hypothetical protein Csa_008209 [Cucumis sativus][more]
BLAST of CsaV3_5G032840 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G032840 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G032840 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G032840.1CsaV3_5G032840.1mRNA