CsaV3_5G032030 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G032030
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 26030756 .. 26031089 (+)
RNA-Seq ExpressionCsaV3_5G032030
SyntenyCsaV3_5G032030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAATGATTTGCGATTGCCAAAGCCGTGTGGGTATAAGAAGGCAACGGCATTTCCGACACGTCGGCTGCGGATTGCTACACTGCAGCATTTATTTAACCTTGTGGCGGGGTAGACGGTAAGAGCTTAAGTTGGAATATATATATATAAAATATGCAATAAAGTTGACTACATGACGTGTCTCTTCCATTACCTAGAAGAGAAGTAAAGTAAAAGGCTCCAAATCCAGCACGTGCTTGACGGGAACTTCTCAAACTCCAACAACTTGCATAAAAATTGGGGCACAGATGACTCGGTCAAATAATCCAATAGGAATTCGACAAATTTCCTAA

mRNA sequence

ATGGTAAATGATTTGCGATTGCCAAAGCCGTGTGGGTATAAGAAGGCAACGGCATTTCCGACACGTCGGCTGCGGATTGCTACACTGCAGCATTTATTTAACCTTAAGAGAAGTAAAGTAAAAGGCTCCAAATCCAGCACGTGCTTGACGGGAACTTCTCAAACTCCAACAACTTGCATAAAAATTGGGGCACAGATGACTCGGTCAAATAATCCAATAGGAATTCGACAAATTTCCTAA

Coding sequence (CDS)

ATGGTAAATGATTTGCGATTGCCAAAGCCGTGTGGGTATAAGAAGGCAACGGCATTTCCGACACGTCGGCTGCGGATTGCTACACTGCAGCATTTATTTAACCTTAAGAGAAGTAAAGTAAAAGGCTCCAAATCCAGCACGTGCTTGACGGGAACTTCTCAAACTCCAACAACTTGCATAAAAATTGGGGCACAGATGACTCGGTCAAATAATCCAATAGGAATTCGACAAATTTCCTAA

Protein sequence

MVNDLRLPKPCGYKKATAFPTRRLRIATLQHLFNLKRSKVKGSKSSTCLTGTSQTPTTCIKIGAQMTRSNNPIGIRQIS*
Homology
[Close]
BLAST of CsaV3_5G032030 vs. NCBI nr
Match: KGN51854.1 (hypothetical protein Csa_008492 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 4.3e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MVNDLRLPKPCGYKKATAFPTRRLRIATLQHLFNLKRSKVKGSKSSTCLTGTSQTPTTCI 60
          MVNDLRLPKPCGYKKATAFPTRRLRIATLQHLFNLKRSKVKGSKSSTCLTGTSQTPTTCI
Sbjct: 1  MVNDLRLPKPCGYKKATAFPTRRLRIATLQHLFNLKRSKVKGSKSSTCLTGTSQTPTTCI 60

Query: 61 KIGAQMTRSNNPIGIRQIS 80
          KIGAQMTRSNNPIGIRQIS
Sbjct: 61 KIGAQMTRSNNPIGIRQIS 79

[Close]
BLAST of CsaV3_5G032030 vs. ExPASy TrEMBL
Match: A0A0A0KSG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603990 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.1e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MVNDLRLPKPCGYKKATAFPTRRLRIATLQHLFNLKRSKVKGSKSSTCLTGTSQTPTTCI 60
          MVNDLRLPKPCGYKKATAFPTRRLRIATLQHLFNLKRSKVKGSKSSTCLTGTSQTPTTCI
Sbjct: 1  MVNDLRLPKPCGYKKATAFPTRRLRIATLQHLFNLKRSKVKGSKSSTCLTGTSQTPTTCI 60

Query: 61 KIGAQMTRSNNPIGIRQIS 80
          KIGAQMTRSNNPIGIRQIS
Sbjct: 61 KIGAQMTRSNNPIGIRQIS 79

The following BLAST results are available for this feature:
BLAST of CsaV3_5G032030 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51854.14.3e-36100.00hypothetical protein Csa_008492 [Cucumis sativus][more]
BLAST of CsaV3_5G032030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G032030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSG92.1e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603990 PE=4 SV=1[more]
BLAST of CsaV3_5G032030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G032030.1CsaV3_5G032030.1mRNA