CsaV3_5G031660 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G031660
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 25794821 .. 25795126 (-)
RNA-Seq ExpressionCsaV3_5G031660
SyntenyCsaV3_5G031660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGACGGGCCGAGGAGCGTAGGGTTAGGTTGGGCCTCATAGGCCCTTACTCACCAGTGAGTTGGGCTGGGCCTTGGAGGCTCAACATCTCAACTCTCCAATCTATCGGCTATCTTGCCTCGATCGGTGACTCGATCGGCGGAGAAAGACGGGCGTCCATTTCAATTTTTATCTCCTCTGTTCTTTACAATTTCCGTCGACCACGAGCCGCTAAACAGCTTTTCCCGCTCTTTCGTGACTTCATTGGCGTTCTTTATTATCGTTCTTGCTGTGAAATATCATCTCGAAATTGGAGAACATAG

mRNA sequence

ATGAATCGACGGGCCGAGGAGCGTAGGGTTAGGTTGGGCCTCATAGGCCCTTACTCACCAGTGAGTTGGGCTGGGCCTTGGAGGCTCAACATCTCAACTCTCCAATCTATCGGCTATCTTGCCTCGATCGGTGACTCGATCGGCGGAGAAAGACGGGCGTCCATTTCAATTTTTATCTCCTCTGTTCTTTACAATTTCCGTCGACCACGAGCCGCTAAACAGCTTTTCCCGCTCTTTCGTGACTTCATTGGCGTTCTTTATTATCGTTCTTGCTGTGAAATATCATCTCGAAATTGGAGAACATAG

Coding sequence (CDS)

ATGAATCGACGGGCCGAGGAGCGTAGGGTTAGGTTGGGCCTCATAGGCCCTTACTCACCAGTGAGTTGGGCTGGGCCTTGGAGGCTCAACATCTCAACTCTCCAATCTATCGGCTATCTTGCCTCGATCGGTGACTCGATCGGCGGAGAAAGACGGGCGTCCATTTCAATTTTTATCTCCTCTGTTCTTTACAATTTCCGTCGACCACGAGCCGCTAAACAGCTTTTCCCGCTCTTTCGTGACTTCATTGGCGTTCTTTATTATCGTTCTTGCTGTGAAATATCATCTCGAAATTGGAGAACATAG

Protein sequence

MNRRAEERRVRLGLIGPYSPVSWAGPWRLNISTLQSIGYLASIGDSIGGERRASISIFISSVLYNFRRPRAAKQLFPLFRDFIGVLYYRSCCEISSRNWRT*
Homology
[Close]
BLAST of CsaV3_5G031660 vs. NCBI nr
Match: KGN51815.1 (hypothetical protein Csa_008789 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 4.6e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MNRRAEERRVRLGLIGPYSPVSWAGPWRLNISTLQSIGYLASIGDSIGGERRASISIFIS 60
           MNRRAEERRVRLGLIGPYSPVSWAGPWRLNISTLQSIGYLASIGDSIGGERRASISIFIS
Sbjct: 1   MNRRAEERRVRLGLIGPYSPVSWAGPWRLNISTLQSIGYLASIGDSIGGERRASISIFIS 60

Query: 61  SVLYNFRRPRAAKQLFPLFRDFIGVLYYRSCCEISSRNWRT 102
           SVLYNFRRPRAAKQLFPLFRDFIGVLYYRSCCEISSRNWRT
Sbjct: 61  SVLYNFRRPRAAKQLFPLFRDFIGVLYYRSCCEISSRNWRT 101

[Close]
BLAST of CsaV3_5G031660 vs. ExPASy TrEMBL
Match: A0A0A0KQ88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G602140 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.2e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MNRRAEERRVRLGLIGPYSPVSWAGPWRLNISTLQSIGYLASIGDSIGGERRASISIFIS 60
           MNRRAEERRVRLGLIGPYSPVSWAGPWRLNISTLQSIGYLASIGDSIGGERRASISIFIS
Sbjct: 1   MNRRAEERRVRLGLIGPYSPVSWAGPWRLNISTLQSIGYLASIGDSIGGERRASISIFIS 60

Query: 61  SVLYNFRRPRAAKQLFPLFRDFIGVLYYRSCCEISSRNWRT 102
           SVLYNFRRPRAAKQLFPLFRDFIGVLYYRSCCEISSRNWRT
Sbjct: 61  SVLYNFRRPRAAKQLFPLFRDFIGVLYYRSCCEISSRNWRT 101

The following BLAST results are available for this feature:
BLAST of CsaV3_5G031660 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51815.14.6e-51100.00hypothetical protein Csa_008789 [Cucumis sativus][more]
BLAST of CsaV3_5G031660 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G031660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ882.2e-51100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G602140 PE=4 SV=1[more]
BLAST of CsaV3_5G031660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G031660.1CsaV3_5G031660.1mRNA