CsaV3_5G030560 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G030560
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 25092091 .. 25092471 (-)
RNA-Seq ExpressionCsaV3_5G030560
SyntenyCsaV3_5G030560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTGGAAATAACTTTCTGCTTCTCCGATTTAGTCATCTTGACGTCGGCTCTCCGTTTTTCTTCCTCAAGCTCTACTGGGAACTTGCCTGTTGAAGACTATCATCATCCGTGCACACAATTCAGAACGTTCGACTGTTGATGAAGTCAGGAGAGAAGATGTCATTTATCTATAGGATTTGGTCGTCTTTATTATTCATTACGTCCTGTTTCTTGTCATTGTGGTGGTTCTTCAGTATGTCGAAGTTATGCTTTTTGTGTCAGACAGTTCATGTTATGCTCTGTTCCTTCCCTCTCTTTAATTTTCTACGAACTTGTTGGTCTTACGACTTTGATTGATGTCCTATTTTTTACTTCTATTGCGTTGTGGGAATCCTAA

mRNA sequence

ATGGTTCTGGAAATAACTTTCTGCTTCTCCGATTTAGTCATCTTGACGTCGGCTCTCCGTTTTTCTTCCTCAAGCTCTACTGGGAACTTGCCTGTTGAAGACTATCATCATCCGTGCACACAATTCAGAACGTTCGACTTATGTCGAAGTTATGCTTTTTGTGTCAGACAGTTCATGTTATGCTCTGTTCCTTCCCTCTCTTTAATTTTCTACGAACTTGTTGGTCTTACGACTTTGATTGATGTCCTATTTTTTACTTCTATTGCGTTGTGGGAATCCTAA

Coding sequence (CDS)

ATGGTTCTGGAAATAACTTTCTGCTTCTCCGATTTAGTCATCTTGACGTCGGCTCTCCGTTTTTCTTCCTCAAGCTCTACTGGGAACTTGCCTGTTGAAGACTATCATCATCCGTGCACACAATTCAGAACGTTCGACTTATGTCGAAGTTATGCTTTTTGTGTCAGACAGTTCATGTTATGCTCTGTTCCTTCCCTCTCTTTAATTTTCTACGAACTTGTTGGTCTTACGACTTTGATTGATGTCCTATTTTTTACTTCTATTGCGTTGTGGGAATCCTAA

Protein sequence

MVLEITFCFSDLVILTSALRFSSSSSTGNLPVEDYHHPCTQFRTFDLCRSYAFCVRQFMLCSVPSLSLIFYELVGLTTLIDVLFFTSIALWES*
Homology
[Close]
BLAST of CsaV3_5G030560 vs. NCBI nr
Match: KGN51702.1 (hypothetical protein Csa_008512 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MVLEITFCFSDLVILTSALRFSSSSSTGNLPVEDYHHPCTQFRTFDLCRSYAFCVRQFML 60
          MVLEITFCFSDLVILTSALRFSSSSSTGNLPVEDYHHPCTQFRTFDLCRSYAFCVRQFML
Sbjct: 1  MVLEITFCFSDLVILTSALRFSSSSSTGNLPVEDYHHPCTQFRTFDLCRSYAFCVRQFML 60

Query: 61 CSVPSLSLIFYELVGLTTLIDVLFFTSIALWES 94
          CSVPSLSLIFYELVGLTTLIDVLFFTSIALWES
Sbjct: 61 CSVPSLSLIFYELVGLTTLIDVLFFTSIALWES 93

[Close]
BLAST of CsaV3_5G030560 vs. ExPASy TrEMBL
Match: A0A0A0KTF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590190 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.2e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MVLEITFCFSDLVILTSALRFSSSSSTGNLPVEDYHHPCTQFRTFDLCRSYAFCVRQFML 60
          MVLEITFCFSDLVILTSALRFSSSSSTGNLPVEDYHHPCTQFRTFDLCRSYAFCVRQFML
Sbjct: 1  MVLEITFCFSDLVILTSALRFSSSSSTGNLPVEDYHHPCTQFRTFDLCRSYAFCVRQFML 60

Query: 61 CSVPSLSLIFYELVGLTTLIDVLFFTSIALWES 94
          CSVPSLSLIFYELVGLTTLIDVLFFTSIALWES
Sbjct: 61 CSVPSLSLIFYELVGLTTLIDVLFFTSIALWES 93

The following BLAST results are available for this feature:
BLAST of CsaV3_5G030560 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51702.11.9e-43100.00hypothetical protein Csa_008512 [Cucumis sativus][more]
BLAST of CsaV3_5G030560 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G030560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTF19.2e-44100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590190 PE=4 SV=1[more]
BLAST of CsaV3_5G030560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G030560.1CsaV3_5G030560.1mRNA