CsaV3_5G030070 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G030070
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Transcription termination factor MTERF5
Location	chr5: 24777884 .. 24779692 (+)
RNA-Seq Expression	CsaV3_5G030070
Synteny	CsaV3_5G030070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCGAAATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCATAAACGTTCTCTCAATTCCATTTCTACTTCTACATTGCCTTCACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTGGCCTGTCTTCTGGATCTCCTACTTCCAATGGTCGAAAGCTCCGATTCGATGAAAAACACATTCAGCAGTACGAAGCCATTATCGGTTTCTTGAAATCTCATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGGCAACCTTCAATCCTTCAATCCAAAGTATCCGACAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAAACGGGATCGTCGGTTCTTTACTTCCTAAGGTAATTCTATCAAGCCCTGGGATTCTTCTCAGGAGCTTAGATTCTCAGTTGAAACCATCCTTTCGTCTCATAAAGGAAATGCTTGAAACGGATGAAAATGTAACTGCTGCTATTTGTCGTTATACGTGGCTTCTAACTTATAGTTCCAAGGGTACTCTGCGATCTAACATTGATATTTTGGTCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGAATTGAACCCTAGAACTATTGTACAAAATGTTGATAGAATAATTGATGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCTAAGGATTTTAAGTTTGTTCATGCAGTTACTACAGTGCTTTCAATGAGTGATTCAGCTTGGAAGAAAAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAAATTCTTACAGCATTTAAGAGATATCCACCTTATTTAACTTGTTCGGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTAGATCCAGGAACTCTAATTAGATACCCTGTGTTATTCAAGTATTCAGTCGACAAGCGGCTCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACGAAAAGAGTGTTCAGTTGTTTTTCCGAGGGGAGAGAGACTTTGTGGAGAATTATATTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACAGAGGCAATGTCGCATCCGAAACCAAATCTGTTCTATAGGATTGGAAGGTAGTTAGTTAATTAGTGTCATAGTTCTTCTATTAGTTGCTCTAAACAAAGATTGACTTTTGTGAATGGAGACCCAGTAGAGGAGGTCTACATGAGCCCTGCGTCTCAAAGAGAAAATACACCGTTGATTTACTAAATGACACAGGTATGTTGGGTACGGTCGTGCTGACATTCATAGTGTTCTTATAGTTTAAATTTGAGCATCATGTGATCTTCAAACGGGAGAGCATTTTTGTTGTTATTAACCTACTGTTTTAAATAACACTGCTTCTTGAGATTTTCAAATGGTGGGAGGGTTGTGTTGTTTTTGTATCCAAATTAAGGCAATTAGTTAGGTAAATCTATTTGGTGTACATTTGATCATAGACATGTTGATCTTGAAATTGGAGGCTTTTTTGTTTTTCTCTTCCTAATCTTTTAGTCACTCCTTGAAGTTTTGCAAGTTTGTAGACTAATTTTGAAAGAAATGATGTTGAAATGGGATGAGAGACATGAGACTTCTACATAAACCTTATGCTTTGTGTTTGTAAGGTAGATGAGATTTGAATGAAATATTGTAGTTGAAGGAAGGGATGTATTACAAATACATTTCCATTTCCCCATATTTCTTTTGCTATTCCAAATAACAATCTTATTATTTTCATGGCATATAATACCAATTTAAATAGCAG

mRNA sequence

ATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCATAAACGTTCTCTCAATTCCATTTCTACTTCTACATTGCCTTCACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTGGCCTGTCTTCTGGATCTCCTACTTCCAATGGTCGAAAGCTCCGATTCGATGAAAAACACATTCAGCAGTACGAAGCCATTATCGGTTTCTTGAAATCTCATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGGCAACCTTCAATCCTTCAATCCAAAGTATCCGACAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAAACGGGATCGTCGGTTCTTTACTTCCTAAGGTAATTCTATCAAGCCCTGGGATTCTTCTCAGGAGCTTAGATTCTCAGTTGAAACCATCCTTTCGTCTCATAAAGGAAATGCTTGAAACGGATGAAAATGTAACTGCTGCTATTTGTCGTTATACGTGGCTTCTAACTTATAGTTCCAAGGGTACTCTGCGATCTAACATTGATATTTTGGTCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGAATTGAACCCTAGAACTATTGTACAAAATGTTGATAGAATAATTGATGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCTAAGGATTTTAAGTTTGTTCATGCAGTTACTACAGTGCTTTCAATGAGTGATTCAGCTTGGAAGAAAAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAAATTCTTACAGCATTTAAGAGATATCCACCTTATTTAACTTGTTCGGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTAGATCCAGGAACTCTAATTAGATACCCTGTGTTATTCAAGTATTCAGTCGACAAGCGGCTCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACGAAAAGAGTGTTCAGTTGTTTTTCCGAGGGGAGAGAGACTTTGTGGAGAATTATATTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACAGAGGCAATGTCGCATCCGAAACCAAATCTGTTCTATAG

Coding sequence (CDS)

ATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCATAAACGTTCTCTCAATTCCATTTCTACTTCTACATTGCCTTCACCCTCTGTTTCTACCATCCAATTCCTCACTAATTCATGTGGCCTGTCTTCTGGATCTCCTACTTCCAATGGTCGAAAGCTCCGATTCGATGAAAAACACATTCAGCAGTACGAAGCCATTATCGGTTTCTTGAAATCTCATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGGCAACCTTCAATCCTTCAATCCAAAGTATCCGACAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAAACGGGATCGTCGGTTCTTTACTTCCTAAGGTAATTCTATCAAGCCCTGGGATTCTTCTCAGGAGCTTAGATTCTCAGTTGAAACCATCCTTTCGTCTCATAAAGGAAATGCTTGAAACGGATGAAAATGTAACTGCTGCTATTTGTCGTTATACGTGGCTTCTAACTTATAGTTCCAAGGGTACTCTGCGATCTAACATTGATATTTTGGTCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGAATTGAACCCTAGAACTATTGTACAAAATGTTGATAGAATAATTGATGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCTAAGGATTTTAAGTTTGTTCATGCAGTTACTACAGTGCTTTCAATGAGTGATTCAGCTTGGAAGAAAAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAAATTCTTACAGCATTTAAGAGATATCCACCTTATTTAACTTGTTCGGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTAGATCCAGGAACTCTAATTAGATACCCTGTGTTATTCAAGTATTCAGTCGACAAGCGGCTCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAACGAAAAGAGTGTTCAGTTGTTTTTCCGAGGGGAGAGAGACTTTGTGGAGAATTATATTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACAGAGGCAATGTCGCATCCGAAACCAAATCTGTTCTATAG

Protein sequence

MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDIYRGNVASETKSVL*

Homology

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BLAST of CsaV3_5G030070 vs. NCBI nr
Match: KAE8648669.1 (hypothetical protein Csa_007829 [Cucumis sativus])

HSP 1 Score: 727.6 bits (1877), Expect = 5.3e-206
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60
           MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK
Sbjct: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60

Query: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120
           HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK
Sbjct: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120

Query: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180
           VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL
Sbjct: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180

Query: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240
           VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS
Sbjct: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240

Query: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300
           AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV
Sbjct: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300

Query: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360
           LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI
Sbjct: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360

Query: 361 YRGNVASETKSVL 374
           YRGNVASETKSVL
Sbjct: 361 YRGNVASETKSVL 373

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BLAST of CsaV3_5G030070 vs. NCBI nr
Match: KAE8648655.1 (hypothetical protein Csa_008541 [Cucumis sativus])

HSP 1 Score: 705.7 bits (1820), Expect = 2.2e-199
Identity = 360/373 (96.51%), Postives = 367/373 (98.39%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60
           MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK
Sbjct: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60

Query: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120
           HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK
Sbjct: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120

Query: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180
           VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL
Sbjct: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180

Query: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240
           VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVK VKELGVEPKDFKFVHAVTTVLSMSDS
Sbjct: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKRVKELGVEPKDFKFVHAVTTVLSMSDS 240

Query: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300
            WKKKINVMKSLGWSE EI TAFK++PPYLTCSE+K+R+VADFCFNTAKLDPGTLI YPV
Sbjct: 241 NWKKKINVMKSLGWSENEIFTAFKKFPPYLTCSEDKLRNVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360
           LFKYSV+KRLRPRYKVLEVLKVKNLLKNEKS QLFFRGER+FVENYIVKHLDEIPNLMDI
Sbjct: 301 LFKYSVEKRLRPRYKVLEVLKVKNLLKNEKSAQLFFRGEREFVENYIVKHLDEIPNLMDI 360

Query: 361 YRGNVASETKSVL 374
           YRGNVASETKSVL
Sbjct: 361 YRGNVASETKSVL 373

[Close]

BLAST of CsaV3_5G030070 vs. NCBI nr
Match: XP_031741760.1 (transcription termination factor MTERF9, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 627.5 bits (1617), Expect = 7.5e-176
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 55  LRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIV 114
           LRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIV
Sbjct: 7   LRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIV 66

Query: 115 GSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLR 174
           GSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLR
Sbjct: 67  GSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLR 126

Query: 175 SNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTV 234
           SNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTV
Sbjct: 127 SNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTV 186

Query: 235 LSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGT 294
           LSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGT
Sbjct: 187 LSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGT 246

Query: 295 LIRYPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEI 354
           LIRYPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEI
Sbjct: 247 LIRYPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEI 306

Query: 355 PNLMDIYRGNVASETKSVL 374
           PNLMDIYRGNVASETKSVL
Sbjct: 307 PNLMDIYRGNVASETKSVL 325

[Close]

BLAST of CsaV3_5G030070 vs. NCBI nr
Match: XP_031741759.1 (transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 605.9 bits (1561), Expect = 2.3e-169
Identity = 306/320 (95.62%), Postives = 314/320 (98.12%), Query Frame = 0


Query: 54  KLRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGI 113
           +LRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGI
Sbjct: 16  ELRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGI 75

Query: 114 VGSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTL 173
           VGSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTL
Sbjct: 76  VGSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTL 135

Query: 174 RSNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTT 233
           RSNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVK VKELGVEPKDFKFVHAVTT
Sbjct: 136 RSNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKRVKELGVEPKDFKFVHAVTT 195

Query: 234 VLSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPG 293
           VLSMSDS WKKKINVMKSLGWSE EI TAFK++PPYLTCSE+K+R+VADFCFNTAKLDPG
Sbjct: 196 VLSMSDSNWKKKINVMKSLGWSENEIFTAFKKFPPYLTCSEDKLRNVADFCFNTAKLDPG 255

Query: 294 TLIRYPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDE 353
           TLI YPVLFKYSV+KRLRPRYKVLEVLKVKNLLKNEKS QLFFRGER+FVENYIVKHLDE
Sbjct: 256 TLISYPVLFKYSVEKRLRPRYKVLEVLKVKNLLKNEKSAQLFFRGEREFVENYIVKHLDE 315

Query: 354 IPNLMDIYRGNVASETKSVL 374
           IPNLMDIYRGNVASETKSVL
Sbjct: 316 IPNLMDIYRGNVASETKSVL 335

[Close]

BLAST of CsaV3_5G030070 vs. NCBI nr
Match: XP_031741908.1 (transcription termination factor MTERF5, chloroplastic-like isoform X1 [Cucumis sativus] >KAE8648667.1 hypothetical protein Csa_007838 [Cucumis sativus])

HSP 1 Score: 603.6 bits (1555), Expect = 1.2e-168
Identity = 332/491 (67.62%), Postives = 350/491 (71.28%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRF--- 60
           MFKISSTFLLHFIHKRSLN++STSTLP PSVSTIQFLTNSCGLSSGSPTS GRKL+F   
Sbjct: 1   MFKISSTFLLHFIHKRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSKGRKLQFDGK 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  SIQKYEAIIGFLKSHGFENSQIAKLVSKQPSILQSKVSNNLKPKFEFLQEVGFVGPLLPK 120

Query: 121 -------------------------------------------------------DEKHI 180
                                                                  DEK+I
Sbjct: 121 LILSNPGILIRSLDSQLKPTFFILKEILGEKGNSIKNSCGLSTESPSSAGRKLRIDEKNI 180

Query: 181 QQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPKVI 240
           QQYEAI+GF KSHGFENSQIAKLVSRQPSILQS VS NLKPKFEFLQENG VG LLPK+I
Sbjct: 181 QQYEAIVGFFKSHGFENSQIAKLVSRQPSILQSTVSTNLKPKFEFLQENGFVGPLLPKLI 240

Query: 241 LSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDILVS 300
           LS+PGIL+RSLDSQLKP+FRLIKEMLE+D  VT AICR TWLLT +SKG +RSNID+LVS
Sbjct: 241 LSNPGILIRSLDSQLKPTFRLIKEMLESDVKVTTAICRSTWLLTSNSKGPMRSNIDVLVS 300

Query: 301 EGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDSAW 360
           EGVPSRNI KMIELNPRTI  NVDR+IDAVKTVKELGVEPKD KFV AV+ V+S SDSAW
Sbjct: 301 EGVPSRNIGKMIELNPRTITLNVDRMIDAVKTVKELGVEPKDRKFVLAVSAVVSRSDSAW 360

Query: 361 KKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPVLF 374
           KKKINVMKSLGWSEKEILTAFKRYPP+  CSEEKMRDVADFCFNTAKLDPGTLIRYPVLF
Sbjct: 361 KKKINVMKSLGWSEKEILTAFKRYPPFFNCSEEKMRDVADFCFNTAKLDPGTLIRYPVLF 420

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.0e-14
Identity = 65/259 (25.10%), Postives = 120/259 (46.33%), Query Frame = 0


Query: 69  IGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGI 128
           + +L S G ++  I +++ RQP ILQ  V +NLK    FL   GI  S + +++ ++P +
Sbjct: 223 LDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSL 282

Query: 129 LLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDILVSEGVPSR 188
              S+++ L+P+ R + E +                                   G+   
Sbjct: 283 FSYSVENSLRPTIRYLIEEV-----------------------------------GIKET 342

Query: 189 NIAKMIELNPRTIVQNVDRIIDA--VKTVKELGVEPKD--FKFVHAVTTVLSMS-DSAWK 248
           ++ K+++L+P+ +VQ +D   +   +   KELG  P+D   K V     +L  S D  + 
Sbjct: 343 DVGKVVQLSPQILVQRLDITWNTRYMFLSKELGA-PRDSVVKMVKKHPQLLHYSIDDGFL 402

Query: 249 KKINVMKSLGWSEKEILTAFKRYPPYLTCS-EEKMRDVADFCFNTAKLDPGTLIRYPVLF 308
            +IN ++S+G    +IL         L+ S E+ ++    +  N    +   L +YP+  
Sbjct: 403 PRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYL 445

Query: 309 KYSVDKRLRPRYKVLEVLK 322
             S+D+R+RPR++ L  LK
Sbjct: 463 SLSLDQRIRPRHRFLVELK 445

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.7e-11
Identity = 69/266 (25.94%), Postives = 119/266 (44.74%), Query Frame = 0


Query: 71  FLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGILL 130
           +L   G    QI  +  +  +     +   +KP  EFL + GI  S +P ++   P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 131 RSLDSQLKPSFRLIKEMLETDENVTA-AICRYTWLLTYSSKGTLRSNIDILVSEGVPSRN 190
            SL   LKP+   + E L  D+N  A  I R+  +LTY S+  L S ++ L   G+    
Sbjct: 262 ISLTDNLKPTMAFL-ETLGIDKNQWAKIISRFPAILTY-SRQKLTSTVEFLSQTGLTEEQ 321

Query: 191 IAKMIELNPRTIVQNV-DRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMS-DSAWKKKIN 250
           I +++   P  +  +V D++   ++  + L V+      +H       +S +S  K    
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVA--VLLHRCPQTFGLSIESNLKPVTE 381

Query: 251 VMKSLGWSEKEILTAFKRYPPYLTCS-EEKMRDVADFCFNTAKLDPGTLIRYPVLFKYSV 310
                G+   EI     RY    T S +E +    D+ F T       L+++P  F YS+
Sbjct: 382 FFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSL 441

Query: 311 DKRLRPRYKVLEVLKVKNLLKNEKSV 333
            +R++PRY++++   V+ LL    S+
Sbjct: 442 QERIKPRYELVQRSGVRLLLNQVLSL 462

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.8e-08
Identity = 58/267 (21.72%), Postives = 110/267 (41.20%), Query Frame = 0


Query: 55  LRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIV 114
           LR DE+ I   E     L S G    ++A  +++ P IL   V + L P   F Q  G+ 
Sbjct: 72  LRLDERLIPMVEC----LSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVP 131

Query: 115 GSLLPKVILSSPGILLRSLDSQLKPSFRLIKEM-LETDENVTAAICRYTWLLTYSSKGTL 174
            + L K+IL +P ++  S+D++L      +  + L+ D  +   + +  +L+ YS    L
Sbjct: 132 ETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRL 191

Query: 175 RSNIDILVSEGVPSRNIAKMIELN-PRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVT 234
           R   + L S    S +  K + +N P+ + ++V++I+                       
Sbjct: 192 RPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKIL----------------------- 251

Query: 235 TVLSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTCS-EEKMRDVADFCFNTAKLD 294
                     K   + +K  G+ + +I T    YP  L  S +  ++    F        
Sbjct: 252 ----------KPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 301

Query: 295 PGTLIRYPVLFKYSVDKRLRPRYKVLE 319
              +  YP  F + + K++  R+K+++
Sbjct: 312 MDEVASYPEFFHHGLKKKVESRFKLVK 301

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05
Identity = 38/141 (26.95%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 69  IGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGI 128
           + FL S    N  +A      P  L   V  N+ P  ++L + G+    LP ++   P +
Sbjct: 116 VEFLHSLDLSNEDLA----AYPLALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQV 175

Query: 129 LLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDILVSEGVPSR 188
           L  S+   L P  + ++ M     +V   + RY  LL +  +GT+ ++I  LV  GV  R
Sbjct: 176 LHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARR 235

Query: 189 NIAKMIELNPRTIVQNVDRII 210
            +  +I   P  +   V +II
Sbjct: 236 QVGSVITRFPEVLGMRVGKII 252

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.5e-05
Identity = 47/203 (23.15%), Postives = 87/203 (42.86%), Query Frame = 0


Query: 71  FLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGILL 130
           FL S G     +A      P  L   V  N+ P  ++L + G+    LP ++   P +L 
Sbjct: 109 FLGSLGLTQEDLA----AYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLH 168

Query: 131 RSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDILVSEGVPSRNI 190
            S+   L P  + ++ M     +V   + RY  LL +  +GT+ +++  LV  GV  R +
Sbjct: 169 ASVVVDLAPVVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQV 228

Query: 191 AKMIELNPRTIVQNVDRIIDA-VKTVKELGVEPKDF-KFVHAVTTVLSMS-DSAWKKKIN 250
             +I   P  +   V +II   V+ ++ +G++     + +     VL        K  I 
Sbjct: 229 GSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIE 288

Query: 251 VMKSLGWSEKEILTAFKRYPPYL 271
            +  +G  ++ + +   +YP  L
Sbjct: 289 ALVDIGVRKEALASIVMQYPDVL 307

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy TrEMBL
Match: A0A5A7SU45 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002650 PE=3 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 4.3e-161
Identity = 296/372 (79.57%), Postives = 331/372 (88.98%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60
           MFK SSTFLLHFI KR LN++STSTLP  SVSTIQFLTNSCGLSSGSP S GRKL+FDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120
           +IQQYEA+IGF KSHGFENSQIAKLVSRQPSILQS VS +LKPKF+FLQE GIVG LLPK
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180
           VILS+PGIL +S++SQLKP+F LIKEMLE+DE V AAICR +W+L+ +SKGT+RSNID+L
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240
           VSEGVPS NIAKMI LNPR+I++NVDRII AVKTVKELGVEPKD  FV+AV+ V SMSDS
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300
           +WKKKINVMKSLGWSEKEI TAFK+ P +LTCSEEKMRDVADFCFNTAKLDP ++I YP 
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360
            F+ SVDKRL+PRYKV EVLKVKNLLKN+   + F RGER+FVEN +VKHLDEIPNLMDI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

Query: 361 YRGNVASETKSV 373
           YRGN ASETKSV
Sbjct: 361 YRGNDASETKSV 372

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy TrEMBL
Match: A0A5D3CWN7 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002840 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.4e-159
Identity = 296/374 (79.14%), Postives = 329/374 (87.97%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60
           MFKISSTFLLHFI KRS N++STSTLP PSVSTIQFLTNSCGL S SPTS GRKL+F EK
Sbjct: 1   MFKISSTFLLHFIQKRSFNTVSTSTLPLPSVSTIQFLTNSCGLFSASPTSKGRKLQFHEK 60

Query: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120
           +IQ+YEA+I + KSHGFENS IAKLVS+QPSILQS VS NLKPKF+FLQE GIVG LLPK
Sbjct: 61  NIQEYEAVICYFKSHGFENSHIAKLVSKQPSILQSIVSTNLKPKFDFLQEIGIVGPLLPK 120

Query: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180
           VILS+PGIL RS++SQLKP+FRLIKEMLE+DE VT AICR +W+L+ +SKGT+RSN D+L
Sbjct: 121 VILSNPGILFRSVNSQLKPTFRLIKEMLESDEKVTVAICRASWILSANSKGTMRSNFDVL 180

Query: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240
           VSEGVPS NIAKMI LNPR+I++NV R+I AVKTVKELGVEPKD  FV+AV+ V SM+ S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHS 240

Query: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300
           +WKKKINVMKSLGWSEKEI TAFKRYP  LTCSEEKMRDVADFCFNTAKLDPGTLI YPV
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQL--FFRGERDFVENYIVKHLDEIPNLM 360
            F  SVDKRLRPRYKVLEVLKVKNLLKN+K      F +GER+FV+N +VKHLDEIPNLM
Sbjct: 301 FFNLSVDKRLRPRYKVLEVLKVKNLLKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLM 360

Query: 361 DIYRGNVASETKSV 373
           DIYRGN ASETKSV
Sbjct: 361 DIYRGNGASETKSV 374

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy TrEMBL
Match: A0A5D3CX09 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002920 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.9e-156
Identity = 286/373 (76.68%), Postives = 324/373 (86.86%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60
           M KISS+FLLHF H R LN+I TSTLP  SVSTIQFLTNSCGLSSGSPTS GRKL+F EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120
           + QQY A+I FLKSHGFENSQIAKLVSRQPSILQS+VS NLKPKFEFLQE G VG LLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180
           +I+SSP IL +SLDS+LKPSFRL+KEML +DE VTAAICR +WLLTY  KG ++SN D+L
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240
           VSEGVPSRNIAKMI  NPRTI+Q VD++I  VK VKELG+EPK   FVHA+    SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300
            WK+KINVMKSLGWSE+EILTAFKRYP YLTCSEEKMRDVADFCFNTAKLDPGTLI YPV
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360
           LFK S DKR++PRYKVLEVLKVK+LL+N K  ++  +GER+FV+ Y+VK+LD+IPNLMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNVASETKSVL 374
           YRGN+A+ETKSVL
Sbjct: 361 YRGNIAAETKSVL 373

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy TrEMBL
Match: A0A5A7SXE1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001220 PE=3 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 7.1e-156
Identity = 285/373 (76.41%), Postives = 323/373 (86.60%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60
           M KISS+FLLHF H R LN+I TSTLP  SVSTIQFLTNSCGLSSGSPTS GRKL+F EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120
           + QQY A+I FLKSHGFEN QIAKLVSRQPSILQS+VS NLKPKFEFLQE G VG LLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180
           +I+SSP IL +SLDS+LKPSFRL+KEML +DE VTAAICR +WLLTY  KG ++SN D+L
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240
           VSEGVPSRNIAKMI  NPRTI+Q VD++I  VK VKELG+EPK   FVHA+    SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300
            WK+KINVMKSLGWSE+EILTAFKRYP YLTCSEEKMRDVADFCFNTAKLDPGTLI YPV
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360
           LFK S DKR++PRYKVLEVLKVK+LL+N K  ++  +GER+FV+ Y+VK+LD+IPNLMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNVASETKSVL 374
           YRGN+A+ETKSVL
Sbjct: 361 YRGNIAAETKSVL 373

[Close]

BLAST of CsaV3_5G030070 vs. ExPASy TrEMBL
Match: A0A5D3CZZ2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002630 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 9.3e-156
Identity = 290/373 (77.75%), Postives = 321/373 (86.06%), Query Frame = 0


Query: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60
           MFK SSTFLLHFI KR LN++STSTLP  SVST++FLTNSCGLSSGSPTSNGRKL+FDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120
           +IQQYEA+IGFLKSHG EN QIAKLVSR+P ILQSKV  NLKPKFEFLQE G VG LLPK
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVPTNLKPKFEFLQETGFVGPLLPK 120

Query: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180
           VIL++PGILLRSLDS LKPSFRLIKEMLE+DE V AAI R TWLLT S+KG LRSNID L
Sbjct: 121 VILTNPGILLRSLDSHLKPSFRLIKEMLESDEKVIAAIFRSTWLLT-SNKGNLRSNIDAL 180

Query: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240
           VSEGV SRNIAKMIE++PRTI+ NVDR I+AVKTVKELG+EP+D  FV  +  +LS  DS
Sbjct: 181 VSEGVSSRNIAKMIEIDPRTIIVNVDRTINAVKTVKELGIEPRDCTFVRTLNALLSKRDS 240

Query: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300
             KKKINVMKSLGWSEKEI TAFKR+PPYLTCSEEK+RDVA F  NTAKLD GTLI YPV
Sbjct: 241 NLKKKINVMKSLGWSEKEIFTAFKRFPPYLTCSEEKLRDVAYFFSNTAKLDRGTLITYPV 300

Query: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360
            FKYSVDKRL+PRYKV E L VKNLLKN+   + F +GER+FVE  +VKHLDEIPNLMD+
Sbjct: 301 FFKYSVDKRLQPRYKVFEALTVKNLLKNKNIARWFIQGEREFVEENVVKHLDEIPNLMDV 360

Query: 361 YRGNVASETKSVL 374
           YRGNV +ETK+VL
Sbjct: 361 YRGNVTAETKTVL 372

[Close]

BLAST of CsaV3_5G030070 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 191.8 bits (486), Expect = 9.8e-49
Identity = 109/333 (32.73%), Postives = 179/333 (53.75%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSNGRKLRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSI 92
           T+ +L +SCGLS  S T   RKL  D    ++   ++  L+ HGF  +QI+ LV ++P +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSP--ERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDE 152
           L +     L PK  F    G+  SLL + + S P IL RSL +QL PS+  +K +L++DE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 NVTAAICRYTWLLTYSSKGTLRSNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAV 212
            + AA+ R TW+        L  NI+ +   GVP + I  ++   P  ++Q         
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KTVKELGVEPKDFKFVHAVTTVLSMSD-SAWKKKINVMKSLGWSEKEILTAFKRYPPYLT 272
           K  +E+G  P+   FV A+  +    + S W K   V +  GWSE +I+ AFK++P  + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRDVADFCFNTAKLDPGTLIRYPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNEKS 332
            SE K+    ++  N   + P ++ + PV+  +S++KR+ PR  V +VL    L+K + S
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 V-QLFFRGERDFVENYIVKHLDEIPNLMDIYRG 364
           +  L    E+ F+E  ++K+ +E+P LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of CsaV3_5G030070 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 159.8 bits (403), Expect = 4.1e-39
Identity = 93/334 (27.84%), Postives = 167/334 (50.00%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSNGRKLRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSI 92
           T+ +L +SCGLS  S  SN R ++      ++ ++++   K HGF N QI  ++   P +
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSS--KKPDSVLALFKDHGFTNDQITSVIKSFPRV 117

Query: 93  LQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDE 152
           L     D + PK  F    G   S   K+I SSP +L  SL  +L P +  +K +L  +E
Sbjct: 118 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 177

Query: 153 NVTAAICRYTWLLTYSSKGTLRSNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAV 212
           +V   + R     +      +   + I    GVP ++I  +++ +P T      R  + +
Sbjct: 178 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 213 KTVKELGVEPKDFKFVHAVTTVLSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTC 272
             V   G +PK   FVHA+      S+SA ++K  + +  GWS+++ + A  R+P  +T 
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 297

Query: 273 SEEKMRDVADFCFNTAKLDPGTLIRYPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNE--K 332
           S+EK+    ++  N   L    ++  PV+   S++KR++PR +V+ +L  K L+K E   
Sbjct: 298 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 357

Query: 333 SVQLFFRGERDFVENYIVKHLDEIPNLMDIYRGN 365
              +      +F++ +++K+ DE+P L+  +  N
Sbjct: 358 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of CsaV3_5G030070 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 129.8 bits (325), Expect = 4.6e-30
Identity = 95/346 (27.46%), Postives = 170/346 (49.13%), Query Frame = 0


Query: 17  SLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDE-KHIQQYEAIIGFLKSH 76
           SL+  S++  P+ S+S   F+          P +    +R+   K ++Q  ++I  LKS+
Sbjct: 23  SLHHFSSNATPA-SISNPAFVEFLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSY 82

Query: 77  GFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGILLRSLDS 136
            F ++QI K +   P ++   V   L+PK  F ++ G  GS L K +  +  ++  SL  
Sbjct: 83  SFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVK 142

Query: 137 QLKPSFRLIKEML-ETDENVTAAICRYTWLLTYSSKGT-LRSNIDILVSEGVPSRNIAKM 196
           +L P+  ++K ++    E++   + R  WLL        L  NI  L + G+    +A +
Sbjct: 143 KLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASL 202

Query: 197 IELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDSAWKKKINVMKSLG 256
           +   PR    + +++   V    +LG        VHAV ++ S+S+  + +K+ +  + G
Sbjct: 203 LRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANG 262

Query: 257 WSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPVLFKYSVDKRLRPR 316
           +SE EI    +R P  + CSE+K+    +F      L+   L + P +  Y+++KR+ PR
Sbjct: 263 FSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPR 322

Query: 317 YKVLEVLKVKNLL-----KNEKSVQLFFRGERDFVENYIVKHLDEI 355
            KVL++L+ K LL     K +  V +    E  F+E Y+V+  DEI
Sbjct: 323 LKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEI 367

[Close]

BLAST of CsaV3_5G030070 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 126.3 bits (316), Expect = 5.1e-29
Identity = 91/371 (24.53%), Postives = 175/371 (47.17%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSNGRKLRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSI 92
           T+ +L +S GL++    S  RK+ F++K+    ++++  L SHGF  SQI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDE 152
           L +    +L PK +FLQ  G   S + +++ S P IL +     +   +  IK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 NVTAAICRYTWLLTYSSKGTLRSNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAV 212
           +    +C     L   +      N+ +L   G+P + +  ++ ++    V   ++  + +
Sbjct: 174 SKNEKLCH---SLPQGNLENKIRNVSVLRELGMPHKLLFSLL-ISDSQPVCGKEKFEETL 233

Query: 213 KTVKELGVEPKDFKFVHAVTTVLSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTC 272
           K V E+G +P   KFV A+  +  M++   ++K+++ KSLG+   ++ ++FK++P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKMRD-----------------------------------VADFCFNTAKLDPGTLIR 332
           SE+KM D                                     +F           ++ 
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNE-KSVQ-LFFRGERDFVENYIVKHLDE-- 365
            P +F YS++KR+ PR  V++ L  K L++NE  S+  +    ++ F+  Y+  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]

BLAST of CsaV3_5G030070 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 126.3 bits (316), Expect = 5.1e-29
Identity = 91/371 (24.53%), Postives = 175/371 (47.17%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSNGRKLRFDEKHIQQYEAIIGFLKSHGFENSQIAKLVSRQPSI 92
           T+ +L +S GL++    S  RK+ F++K+    ++++  L SHGF  SQI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSKVSDNLKPKFEFLQENGIVGSLLPKVILSSPGILLRSLDSQLKPSFRLIKEMLETDE 152
           L +    +L PK +FLQ  G   S + +++ S P IL +     +   +  IK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 NVTAAICRYTWLLTYSSKGTLRSNIDILVSEGVPSRNIAKMIELNPRTIVQNVDRIIDAV 212
           +    +C     L   +      N+ +L   G+P + +  ++ ++    V   ++  + +
Sbjct: 174 SKNEKLCH---SLPQGNLENKIRNVSVLRELGMPHKLLFSLL-ISDSQPVCGKEKFEETL 233

Query: 213 KTVKELGVEPKDFKFVHAVTTVLSMSDSAWKKKINVMKSLGWSEKEILTAFKRYPPYLTC 272
           K V E+G +P   KFV A+  +  M++   ++K+++ KSLG+   ++ ++FK++P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKMRD-----------------------------------VADFCFNTAKLDPGTLIR 332
           SE+KM D                                     +F           ++ 
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPVLFKYSVDKRLRPRYKVLEVLKVKNLLKNE-KSVQ-LFFRGERDFVENYIVKHLDE-- 365
            P +F YS++KR+ PR  V++ L  K L++NE  S+  +    ++ F+  Y+  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

The following BLAST results are available for this feature:

BLAST of CsaV3_5G030070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648669.1	5.3e-206	100.00	hypothetical protein Csa_007829 [Cucumis sativus]	[more]
KAE8648655.1	2.2e-199	96.51	hypothetical protein Csa_008541 [Cucumis sativus]	[more]
XP_031741760.1	7.5e-176	100.00	transcription termination factor MTERF9, chloroplastic-like [Cucumis sativus]	[more]
XP_031741759.1	2.3e-169	95.63	transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus]	[more]
XP_031741908.1	1.2e-168	67.62	transcription termination factor MTERF5, chloroplastic-like isoform X1 [Cucumis ...	[more]

BLAST of CsaV3_5G030070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM80	2.0e-14	25.10	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	2.7e-11	25.94	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	4.8e-08	21.72	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q6AUK6	2.2e-05	26.95	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	8.5e-05	23.15	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]

BLAST of CsaV3_5G030070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SU45	4.3e-161	79.57	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CWN7	1.4e-159	79.14	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CX09	1.9e-156	76.68	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SXE1	7.1e-156	76.41	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CZZ2	9.3e-156	77.75	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of CsaV3_5G030070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	9.8e-49	32.73	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	4.1e-39	27.84	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.6e-30	27.46	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	5.1e-29	24.53	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	5.1e-29	24.53	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 155..186 e-value: 14.0 score: 14.6 coord: 83..114 e-value: 6.5E-4 score: 29.0 coord: 225..255 e-value: 7.0 score: 15.6 coord: 191..221 e-value: 22.0 score: 13.9 coord: 292..323 e-value: 0.031 score: 23.4 coord: 260..291 e-value: 280.0 score: 8.2 coord: 119..150 e-value: 74.0 score: 12.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 189..323 e-value: 5.5E-21 score: 74.8 coord: 70..222 e-value: 6.4E-22 score: 77.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 18..365
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 135..354 e-value: 2.8E-42 score: 146.7
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 18..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G030070.1	CsaV3_5G030070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding