CsaV3_5G029330 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCAAACATTCTTAAGGTTTTATGTTTTATATGGTTGAATGTGTCATACTGACGATTTCATGTCATTCGCATGGAAATTTTAAAATTGTTGTATTTTAAAAATTCGGAGACAAAATGAGTTAATTTTTATATAATCGTAGGGTCCAAAAACATAAGTTTTTAAAAGTCTGATAGCTAACAGACATATTTTATAAAACTTGAGGGAGTAAAGATGGGTAATTTTGCACCTTCTTTTTGGCTAACAATTTGTGTGTATAAATTACAATGTTTTATAGGGACATTTAAACATTTAACATTAGATTAGAAATTAGAAGGAAAAAGTTCGAGGAAGGAGTTGAAGCCGTGATCGATTTTCCCGCCTTCTTCAATCACAATCATTTCCTCCGTTTCTCTTCAATCAACAGCACCTCATCCCAATCCTTTGCCTCCAACTCTCTTGTTCCCGCCCTTTTCGTCATCCACGACTCCGGGCCGATCATCTTCCCTACGGTTGAGATTTCGACACCCGTACTACCACTGGAAGGTTCTGTAATGGAAGAATTCCCGTCGATTTTCTTGGTATTCTTTCTTTCTTGATTCTTTCCGTTCTTCTTTCTGGATATCTTATGATTTCTTTAAACTTCCTTTACGTTTGATTCCTTGTTTTTGTTTCTGGGTGTTCTTCTCAGCCCTACGTCTTGGACTTCCGTTTGTTCTGAGTTATCTTGGGCACGTTGGAGCAGTGGAAGATATGATTCAAGGAGTGAATTACGCATCGGCTAGTGCTGGAATTATCCAATTCAGTCCTTTACATATCAATTGGAATTAACGATTACATTCATTACTATCTTTTTAATATATCCAATGTTCAAAATCTTTACCCTCCATGGAATTTTAACCAATTTCTTGCAGCCACAATCAGACAGGAAATCAAGGTGATTTTATTGTTTATAGTTTTTGCTATGCTACATAATGGAAAAAAGTATATGCATACATTACCCATTATGCAATCTCTTTGCCTTCGGGATATTGTTGTTTTGCACATATTTTCATTTTCCAAAGTTTGAGCTTTTGGATTATTTTAGATATTGGAAACTAACCATGCATTATATTGTAAGCCCTGCATAGAAGTTTCGTTTATTTCCACTGTACTAATTTACCAATTGTTCAAGTACTTCCTAAAAGGCTTTGTGTTGATGGTCCAGAATTTGTATTACATGAATGCTAGGAGAACCGTTGTAATGGGATTGGCACCTATTGGTTGTGCTCCTTTCTACCTATGACAGTACCGTGATGAGAATGCTGCGTGTACTGAGGATATAAATGATATGGTTATAGAGTTCAACTTTTCCATGAGATACACGGTCAAGGAGCTCGGCACGGAGCTGCACCATTCGAGTATAATCTTATGTGATTTGCTTCGAGTTTCAATGGATATCTTGAAGGATCATATTTGTGTTCTTCAAGGTTCAATGGACTAG ATGAGGCAAACATTCTTAAGATTAGAAATTAGAAGGAAAAAGTTCGAGGAAGGAGTTGAAGCCGTGATCGATTTTCCCGCCTTCTTCAATCACAATCATTTCCTCCGTTTCTCTTCAATCAACAGCACCTCATCCCAATCCTTTGCCTCCAACTCTCTTGTTCCCGCCCTTTTCGTCATCCACGACTCCGGGCCGATCATCTTCCCTACGGTTGAGATTTCGACACCCGTACTACCACTGGAAGGTTCTGTAATGGAAGAATTCCCGTCGATTTTCTTGTACCGTGATGAGAATGCTGCGTGTACTGAGGATATAAATGATATGGTTATAGAGTTCAACTTTTCCATGAGATACACGGTCAAGGAGCTCGGCACGGAGCTGCACCATTCGAGTATAATCTTATGTGATTTGCTTCGAGTTTCAATGGATATCTTGAAGGATCATATTTGTGTTCTTCAAGGTTCAATGGACTAG ATGAGGCAAACATTCTTAAGATTAGAAATTAGAAGGAAAAAGTTCGAGGAAGGAGTTGAAGCCGTGATCGATTTTCCCGCCTTCTTCAATCACAATCATTTCCTCCGTTTCTCTTCAATCAACAGCACCTCATCCCAATCCTTTGCCTCCAACTCTCTTGTTCCCGCCCTTTTCGTCATCCACGACTCCGGGCCGATCATCTTCCCTACGGTTGAGATTTCGACACCCGTACTACCACTGGAAGGTTCTGTAATGGAAGAATTCCCGTCGATTTTCTTGTACCGTGATGAGAATGCTGCGTGTACTGAGGATATAAATGATATGGTTATAGAGTTCAACTTTTCCATGAGATACACGGTCAAGGAGCTCGGCACGGAGCTGCACCATTCGAGTATAATCTTATGTGATTTGCTTCGAGTTTCAATGGATATCTTGAAGGATCATATTTGTGTTCTTCAAGGTTCAATGGACTAG MRQTFLRLEIRRKKFEEGVEAVIDFPAFFNHNHFLRFSSINSTSSQSFASNSLVPALFVIHDSGPIIFPTVEISTPVLPLEGSVMEEFPSIFLYRDENAACTEDINDMVIEFNFSMRYTVKELGTELHHSSIILCDLLRVSMDILKDHICVLQGSMD* Homology
BLAST of CsaV3_5G029330 vs. NCBI nr
Match: KAE8648631.1 (hypothetical protein Csa_009148 [Cucumis sativus]) HSP 1 Score: 312.0 bits (798), Expect = 2.9e-81 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. NCBI nr
Match: KGN53427.2 (hypothetical protein Csa_014736 [Cucumis sativus]) HSP 1 Score: 92.8 bits (229), Expect = 2.8e-15 Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. NCBI nr
Match: XP_008452220.1 (PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK00787.1 GDSL esterase/lipase [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 7.7e-13 Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. NCBI nr
Match: XP_004145656.2 (GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protein Csa_010616 [Cucumis sativus]) HSP 1 Score: 84.3 bits (207), Expect = 1.0e-12 Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. NCBI nr
Match: XP_038904573.1 (GDSL esterase/lipase At1g71691 [Benincasa hispida]) HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11 Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. ExPASy TrEMBL
Match: A0A0A0KPS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582210 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 3.1e-28 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. ExPASy TrEMBL
Match: A0A0A0KZW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052660 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15 Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. ExPASy TrEMBL
Match: A0A5A7UZU1 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00560 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.7e-13 Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. ExPASy TrEMBL
Match: A0A1S3BSQ9 (GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.7e-13 Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. ExPASy TrEMBL
Match: A0A0A0L7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 4.8e-13 Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of CsaV3_5G029330 vs. TAIR 10
Match: AT4G10950.1 (SGNH hydrolase-type esterase superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 3.4e-11 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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