CsaV3_5G028800 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G028800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein of unknown function (DUF1218)
Location	chr5: 23919734 .. 23922343 (+)
RNA-Seq Expression	CsaV3_5G028800
Synteny	CsaV3_5G028800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTAATAGATTTGTTCATGACAGTAACCGTTGATGTGACCACACATGAAGAGAAGAGATTTGATGAGTCTGTGTTCGACTTTAAATTTCTATATATTTATCAATTATCTTAAAAAAAAATGAAGCCAAAGAATTTAAAAACAAAAGAAAATGTATATATAACTATTTAATTTTTTAAATTTGGTTAAAAATTCAACTATCAATTTATTAAATAAAAAAAATGAAGTGGAAAATGATTGAGGGTTTGAAATGATTGTTTGTTTTTTCCAATTAAAGAATTGAAAACTTGAAGAAGAATGATTACATGAAAGTGGATTTACTTCTCAATACAAAAATTAAAAAAGTAAAAGTAGAAAATAGAAAATAAAATAAAAACAAAAAGCATCTAAAACCGAAGATATTATTTCTTGAAAAACCGACGACGAAAGAACGAAACACTAAGAAAAGGAAAAGGACGACTGGCAGCGGCCGCGCCCCCAGATTGGAAACTTCACCGGCGCTGAATCAGTTACAATAATGGCTACTTCTTTGTTTGTAATAGTCATAATCGCCTCTCTGCATCTAATTGCTTTTGTATTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGTATCCCTTTCCCTCTTTTTTTCTGATTTTTCTCAAAATTGAGGCAGCTCAAACCTTCTAAGCTTTTGTTTCTGTGTGTTTATGGACTTAAAAGGCAGCGGTAGTGCCGGATAAGTACGACGAGACTACTTATTGTGTTTACGATTCCGATGCATCGACGGTGTACGGTCTTGTAGCGTTTGGTTTGTTACTGATTAGCCAGACAGTGCTTATGGTAGTCACAAGGTGTCTCTGCTGTGGTAAAGGCTTGAGAAGCGGAGGATCTACTGTTTGTGCAGTCATCTTCTTCATCATTTCTTGGTATTTTCCTATTCTTAAATCAATATCTAGAATTGGATAGAATATTTAGTGATGGATCTGTTTATCTTCATTTTGCCTGATTTCTGTATCTTGTTGTGTGAATGAATCATTTGGCCTTGAAGTTTGAAGTGTTTTGAGTAAAATGCTGTAGATTGGAGGATTTGTGTATATGTCTATATTACTAAAAGGTAAAATCATGGCCCTTTCAGAAGAACTTCACCAATTTAGTTCAGATCATATGGAAATGAAAACCACTATAATTCAAGTAAAATTTGTTTGGCCAAATCATTATTTGTTACTAAATATCTTTGGTTAATGTGTTTGCTTAATTGTCATCACAAGATGTTTGTATGACGATGTGATTGTGATAAAGTTATTCTTATTCTCTGGTTTGGAAGTATGAACTGATACTAAGACTCTACTGAGCATTAAATCACTATTAAAAATCCAAATCCTCTAGTTTGGTAACCATTTCATGTTCGGTATTTTAATTTTGAAAAGTAAGGACATGAACACGTTTTTACCCATGTTTTAAAAAACTTGGGCTAAATTTTAAAAACTTGTTTTTGTTTTTAGAATTTAGTTAAGAATTCAACTCTATTATCTAAAAACGACATCAACAAGAAATTGAGAGGAAGATATAGACTTAATTTTCAAAACTGGATGGTTACCAAAATGAGACTTCAGTTGATTCATTAGGGCAAATCAAATCTCTTTCTATATGTTCCTTTGACACTAAATTTTGAAAAATGCAACCAGGCATCTCTTCTTGGGAGCTGAGTCCTTATTGCTGGCTGGGTCTGTGAGGAATGCCTACCACACCAAGTACAGATCAGTATTGCCTCTCAATAACTTGTCATGTGCCATGCTTCGTCGTGGGGTGTTCGCTGCTGCAGCGGCTTTGACATTTCTGTCATTGGTGTTTTCAATCCTTTACTACTCGATGCACTCGAGAGCCGATACCGGAGGCTGGCAAAAGCATCAGAATGAAGGCATTGGCATGGGGCCGTCTAATTTACCACAACAAGAGCAGCACGAGCGGAGAGCCGAAGAATTCGGGAAGGTTTAGCTATAACAGGATTTGATCATTAGATTTTATGCTGGGAAAGACAGGTATAACAAAATATCAACTTGTTGCTAAATTATGAATATGTAAAGTGGTAGCTGATATATATCATATATGTTTTGGTTTTAAACTGTGGACTCCAAGATTCATTGCTTACTGAATTTTGGACCATTCACTTACACATAAACTCCCAATATATTATTGTTGTTATTATTATTATTTGGGTATATAAGGTTTAGTATGTTTATTAGTTTGTTTATTATGAAGCTTTCAAACATTCTATCTGACGCATTGAAAAATCACTTTCTTTCCCTATCACTTCCTTTTCAGTATATTATTGAATGAGACCTTATCAAAGACAAGTACTTAGTTTGTTTAAGAGTAACACTTGATAAGGATAAGCACGATAGACCGACCAAACGGTTGGTCAAAGAAGAGAAGGGGCAAGCCTAGGCGTTGGTTTGGAGAAAGTCCAAATTGATAATCAAAGCATTGAATTGACTGACGGACTTGTACTTTATTAAACCGGCCATAATTGATTCAGTGGTGGTTTGGTAAAAAAATTTACTTCAACCAACAATTATACAACTCTAATATTTGAGTGGGCTTAAGTTGCACACATCCTTATACCTAC

mRNA sequence

ATGGCTACTTCTTTGTTTGTAATAGTCATAATCGCCTCTCTGCATCTAATTGCTTTTGTATTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGCAGCGGTAGTGCCGGATAAGTACGACGAGACTACTTATTGTGTTTACGATTCCGATGCATCGACGGTGTACGGTCTTGTAGCGTTTGGTTTGTTACTGATTAGCCAGACAGTGCTTATGGTAGTCACAAGGTGTCTCTGCTGTGGTAAAGGCTTGAGAAGCGGAGGATCTACTGTTTGTGCAGTCATCTTCTTCATCATTTCTTGGCATCTCTTCTTGGGAGCTGAGTCCTTATTGCTGGCTGGGTCTGTGAGGAATGCCTACCACACCAAGTACAGATCAGTATTGCCTCTCAATAACTTGTCATGTGCCATGCTTCGTCGTGGGGTGTTCGCTGCTGCAGCGGCTTTGACATTTCTGTCATTGGTGTTTTCAATCCTTTACTACTCGATGCACTCGAGAGCCGATACCGGAGGCTGGCAAAAGCATCAGAATGAAGGCATTGGCATGGGGCCGTCTAATTTACCACAACAAGAGCAGCACGAGCGGAGAGCCGAAGAATTCGGGAAGGTTTAG

Coding sequence (CDS)

ATGGCTACTTCTTTGTTTGTAATAGTCATAATCGCCTCTCTGCATCTAATTGCTTTTGTATTCGCCATCGGAGCTGAAATGCGCCGGAGCACGGCAGCGGTAGTGCCGGATAAGTACGACGAGACTACTTATTGTGTTTACGATTCCGATGCATCGACGGTGTACGGTCTTGTAGCGTTTGGTTTGTTACTGATTAGCCAGACAGTGCTTATGGTAGTCACAAGGTGTCTCTGCTGTGGTAAAGGCTTGAGAAGCGGAGGATCTACTGTTTGTGCAGTCATCTTCTTCATCATTTCTTGGCATCTCTTCTTGGGAGCTGAGTCCTTATTGCTGGCTGGGTCTGTGAGGAATGCCTACCACACCAAGTACAGATCAGTATTGCCTCTCAATAACTTGTCATGTGCCATGCTTCGTCGTGGGGTGTTCGCTGCTGCAGCGGCTTTGACATTTCTGTCATTGGTGTTTTCAATCCTTTACTACTCGATGCACTCGAGAGCCGATACCGGAGGCTGGCAAAAGCATCAGAATGAAGGCATTGGCATGGGGCCGTCTAATTTACCACAACAAGAGCAGCACGAGCGGAGAGCCGAAGAATTCGGGAAGGTTTAG

Protein sequence

MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAFGLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIGMGPSNLPQQEQHERRAEEFGKV*

Homology

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BLAST of CsaV3_5G028800 vs. NCBI nr
Match: XP_004147116.1 (uncharacterized protein LOC101217379 [Cucumis sativus] >KGN51536.1 hypothetical protein Csa_008005 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF
Sbjct: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120
           GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180
           TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG
Sbjct: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MGPSNLPQQEQHERRAEEFGKV 203
           MGPSNLPQQEQHERRAEEFGKV
Sbjct: 181 MGPSNLPQQEQHERRAEEFGKV 202

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BLAST of CsaV3_5G028800 vs. NCBI nr
Match: XP_008467186.1 (PREDICTED: uncharacterized protein LOC103504596 [Cucumis melo])

HSP 1 Score: 377.9 bits (969), Expect = 5.6e-101
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MAT+LFVIVIIASLHLIAFVFAIGAEMRRSTA VVPDKYDETTYCVYDSDASTVYGLVAF
Sbjct: 1   MATNLFVIVIIASLHLIAFVFAIGAEMRRSTAEVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120
           GLLLISQTVLMVVTRCLCCGKGL+SGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLKSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180
           TKYRS LPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG
Sbjct: 121 TKYRSSLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MGPSNLPQQEQHERRAEEFGKV 203
           MGPSNLPQQE HERRAEEF KV
Sbjct: 181 MGPSNLPQQELHERRAEEFEKV 202

[Close]

BLAST of CsaV3_5G028800 vs. NCBI nr
Match: XP_038874260.1 (uncharacterized protein LOC120066990 [Benincasa hispida])

HSP 1 Score: 354.0 bits (907), Expect = 8.7e-94
Identity = 180/202 (89.11%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MATSL VIVIIASLHLIAFVFAIGAEMRRSTA VVPD+YDETTYCVYDSDAST YGLVAF
Sbjct: 1   MATSLLVIVIIASLHLIAFVFAIGAEMRRSTATVVPDEYDETTYCVYDSDASTTYGLVAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120
           GLLLIS TVLMVVTRCLCCGKGL+SGGSTVCA+I F++SWHLFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFVVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180
           TK+RS L L NLSCAMLRRGVFAAAAALTFLSLVFSILYY+ H+RADTGGWQKHQNEG+G
Sbjct: 121 TKFRSALSLKNLSCAMLRRGVFAAAAALTFLSLVFSILYYTTHARADTGGWQKHQNEGVG 180

Query: 181 MGPSNLPQQEQHERRAEEFGKV 203
           M PSNLP+QEQH+RRAEEF KV
Sbjct: 181 MVPSNLPRQEQHDRRAEEFEKV 202

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BLAST of CsaV3_5G028800 vs. NCBI nr
Match: TYK00265.1 (fiber protein Fb34 [Cucumis melo var. makuwa])

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-89
Identity = 171/176 (97.16%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 27  MRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAFGLLLISQTVLMVVTRCLCCGKGLRSG 86
           MRRSTA VVPDKYDETTYCVYDSDASTVYGLVAFGLLLISQTVLMVVTRCLCCGKGL+SG
Sbjct: 1   MRRSTAEVVPDKYDETTYCVYDSDASTVYGLVAFGLLLISQTVLMVVTRCLCCGKGLKSG 60

Query: 87  GSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKYRSVLPLNNLSCAMLRRGVFAAAA 146
           GSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKYRS LPLNNLSCAMLRRGVFAAAA
Sbjct: 61  GSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKYRSSLPLNNLSCAMLRRGVFAAAA 120

Query: 147 ALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIGMGPSNLPQQEQHERRAEEFGKV 203
           ALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIGMGPSNLPQQE HERRAEEF KV
Sbjct: 121 ALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIGMGPSNLPQQELHERRAEEFEKV 176

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BLAST of CsaV3_5G028800 vs. NCBI nr
Match: KAG6579221.1 (hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.9 bits (829), Expect = 9.6e-85
Identity = 166/201 (82.59%), Postives = 179/201 (89.05%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MATSL  + IIASLHLIAFVFAIGAEMRRSTA V PD+YDETT+CVYDSDASTVYGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120
           GLLLIS TVLMVVTRCLCCGKGL+SGGSTVCA+I FI+SWHLFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180
           TK+R  LP+ NLSC+MLRRGVFAAAAALTFLSLVFSILYY +HSRADTGGWQKHQNEG+G
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIVHSRADTGGWQKHQNEGVG 180

Query: 181 MGPSNLPQQEQHERRAEEFGK 202
           M P +    EQH+R    F K
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

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BLAST of CsaV3_5G028800 vs. ExPASy TrEMBL
Match: A0A0A0KV04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.3e-105
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF
Sbjct: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120
           GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180
           TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG
Sbjct: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MGPSNLPQQEQHERRAEEFGKV 203
           MGPSNLPQQEQHERRAEEFGKV
Sbjct: 181 MGPSNLPQQEQHERRAEEFGKV 202

[Close]

BLAST of CsaV3_5G028800 vs. ExPASy TrEMBL
Match: A0A1S3CSX8 (uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MAT+LFVIVIIASLHLIAFVFAIGAEMRRSTA VVPDKYDETTYCVYDSDASTVYGLVAF
Sbjct: 1   MATNLFVIVIIASLHLIAFVFAIGAEMRRSTAEVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120
           GLLLISQTVLMVVTRCLCCGKGL+SGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLKSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180
           TKYRS LPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG
Sbjct: 121 TKYRSSLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MGPSNLPQQEQHERRAEEFGKV 203
           MGPSNLPQQE HERRAEEF KV
Sbjct: 181 MGPSNLPQQELHERRAEEFEKV 202

[Close]

BLAST of CsaV3_5G028800 vs. ExPASy TrEMBL
Match: A0A5D3BMH3 (Fiber protein Fb34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00060 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.8e-89
Identity = 171/176 (97.16%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 27  MRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAFGLLLISQTVLMVVTRCLCCGKGLRSG 86
           MRRSTA VVPDKYDETTYCVYDSDASTVYGLVAFGLLLISQTVLMVVTRCLCCGKGL+SG
Sbjct: 1   MRRSTAEVVPDKYDETTYCVYDSDASTVYGLVAFGLLLISQTVLMVVTRCLCCGKGLKSG 60

Query: 87  GSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKYRSVLPLNNLSCAMLRRGVFAAAA 146
           GSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKYRS LPLNNLSCAMLRRGVFAAAA
Sbjct: 61  GSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKYRSSLPLNNLSCAMLRRGVFAAAA 120

Query: 147 ALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIGMGPSNLPQQEQHERRAEEFGKV 203
           ALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIGMGPSNLPQQE HERRAEEF KV
Sbjct: 121 ALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIGMGPSNLPQQELHERRAEEFEKV 176

[Close]

BLAST of CsaV3_5G028800 vs. ExPASy TrEMBL
Match: A0A6J1FLQ5 (uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC111445108 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.7e-85
Identity = 166/201 (82.59%), Postives = 178/201 (88.56%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MATSL  + IIASLHLIAFVFAIGAEMRRSTA V PD+YDETT+CVYDSDASTVYGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120
           GLLLIS TVLMVVTRCLCCGKGL+SGGSTVCA+I FI+SWHLFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180
           TK+R  LP+ NLSC+MLRRGVFAAAAALTFLSLVFSILYY  HSRADTGGWQKHQNEG+G
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MGPSNLPQQEQHERRAEEFGK 202
           M P +    EQH+R    F K
Sbjct: 181 MVPPSFSGHEQHDRSTGRFEK 201

[Close]

BLAST of CsaV3_5G028800 vs. ExPASy TrEMBL
Match: A0A6J1JRH3 (uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 165/201 (82.09%), Postives = 178/201 (88.56%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MATSL  + IIASLHLIAFVFAIGAEMRRSTA V PD+YDETT+CVYDSDASTVYGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120
           GLLLIS TVLMVVTRCLCCGKGL+SGGSTVCA+I FI+SWHLFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180
           TK+R  LP+ NLSC+MLRRGVFAAAAALTFLSLVFSILYY  HSRADTGGW+KHQNEG+G
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWEKHQNEGVG 180

Query: 181 MGPSNLPQQEQHERRAEEFGK 202
           M P +    EQH+R    F K
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

[Close]

BLAST of CsaV3_5G028800 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 221.5 bits (563), Expect = 6.3e-58
Identity = 116/197 (58.88%), Postives = 148/197 (75.13%), Query Frame = 0


Query: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60
           MA S+ ++ ++ +LHL+AFVFA GAE RRSTA  VPD+YDE T C Y ++ASTVYG+ AF
Sbjct: 1   MAVSVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAF 60

Query: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGS-TVCAVIFFIISWHLFLGAESLLLAGSVRNAY 120
           GLLL+SQ V+  VT+CLC GKGL +G S TV A++FF++SW  FLGAE+ LL GS RNAY
Sbjct: 61  GLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAY 120

Query: 121 HTKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGI 180
           HTK   +     LSCA+L  GVFAA AA T +SL+ +ILYY  HS+ADTGGW+KHQN+GI
Sbjct: 121 HTKSEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKADTGGWEKHQNDGI 180

Query: 181 GMG---PSNLPQQEQHE 194
            +G   PS+ P+Q+  E
Sbjct: 181 NIGMTTPSDAPKQQNTE 197

[Close]

BLAST of CsaV3_5G028800 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36
Identity = 85/172 (49.42%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 4   SLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAFGLL 63
           S  VI+I+  L LIA   AI AE RRS   VVPD   E  +C Y SD +T YG  AF LL
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 64  LISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKY 123
            ISQ ++MV +RC CCGK L+ GGS  C ++ F+I W  FL AE  LLAGS+RNAYHT Y
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTY 122

Query: 124 RSVLPLNN-LSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKH 175
           R +  + N  SC ++R+GVFAA A+    + + S  YY  +SRA  G    H
Sbjct: 123 RRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQTPH 174

[Close]

BLAST of CsaV3_5G028800 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 83/163 (50.92%), Postives = 104/163 (63.80%), Query Frame = 0


Query: 4   SLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAFGLL 63
           S  V  I+   +LIAF  A+ AE RRSTA VV D   +  YCVYDSD +T YG+ AF   
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 64  LISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKY 123
           + SQ ++M+V+RC CCGK L+ GGS   A+I FI+SW  FL AE  LLAGSV NAYHTKY
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKY 122

Query: 124 RSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRA 167
           R++   N   C  LR+GVFAA A+  F + + S  YY  +  A
Sbjct: 123 RTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

[Close]

BLAST of CsaV3_5G028800 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 146.0 bits (367), Expect = 3.4e-35
Identity = 80/164 (48.78%), Postives = 104/164 (63.41%), Query Frame = 0


Query: 4   SLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAFGLL 63
           S  V++I+  L LIA   AI AE RRS   V  D+  +  YCVY +D +T YG  AF LL
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 64  LISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKY 123
            +SQ ++M  +RC CCGK L  GGS  CA+I F+I W  FL AE  LLA S+RNAYHT+Y
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQY 122

Query: 124 RSVLPLNN-LSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRA 167
           R +  + +  SC ++R+GVFAA AA T  + + S  YY  +SRA
Sbjct: 123 RKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

[Close]

BLAST of CsaV3_5G028800 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 70/163 (42.94%), Postives = 103/163 (63.19%), Query Frame = 0


Query: 4   SLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAFGLL 63
           S  V +++ +L L+AF F+I AE RRS    + D    TT+CVYDSD +T YG+ AF  L
Sbjct: 7   STLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFL 66

Query: 64  LISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYHTKY 123
           L S+++LM VT+C+C G+ L  G     ++I+FI SW  FL AE+ ++AG+ +NAYHTKY
Sbjct: 67  LSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKY 126

Query: 124 RSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRA 167
              L     SCA LR+G+F A A     ++V ++ YY   +++
Sbjct: 127 ---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:

BLAST of CsaV3_5G028800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147116.1	1.1e-104	100.00	uncharacterized protein LOC101217379 [Cucumis sativus] >KGN51536.1 hypothetical ...	[more]
XP_008467186.1	5.6e-101	97.03	PREDICTED: uncharacterized protein LOC103504596 [Cucumis melo]	[more]
XP_038874260.1	8.7e-94	89.11	uncharacterized protein LOC120066990 [Benincasa hispida]	[more]
TYK00265.1	3.8e-89	97.16	fiber protein Fb34 [Cucumis melo var. makuwa]	[more]
KAG6579221.1	9.6e-85	82.59	hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_5G028800 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G028800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV04	5.3e-105	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1	[more]
A0A1S3CSX8	2.7e-101	97.03	uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=...	[more]
A0A5D3BMH3	1.8e-89	97.16	Fiber protein Fb34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G...	[more]
A0A6J1FLQ5	4.7e-85	82.59	uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JRH3	1.8e-84	82.09	uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148...	[more]

BLAST of CsaV3_5G028800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68220.1	6.3e-58	58.88	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	1.8e-36	49.42	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	1.2e-35	50.92	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	3.4e-35	48.78	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	2.9e-31	42.94	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 59..153 e-value: 3.8E-24 score: 85.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..202
None	No IPR available	PANTHER	PTHR31769:SF63	AEROBIC COPROPORPHYRINOGEN-III OXIDASE (DUF1218)	coord: 3..191
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G028800.1	CsaV3_5G028800.1	mRNA