CsaV3_5G026860 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G026860
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	zinc finger protein CONSTANS-LIKE 6
Location	chr5: 21937871 .. 21941313 (-)
RNA-Seq Expression	CsaV3_5G026860
Synteny	CsaV3_5G026860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCACATTCTATCCACAGCGAAATCTGGATAACAATACAAAATCCACTCTCTCACCCAATCTTCTACATCCACCTGTCAATAAACCAAACACGTCACATCATCTTTTAATATCACATAGCTGACTCAATCGGGTTTCTCTTTCACTTTTTCCCTCAACTGGGTCCCCTCCCCTTCCCTTTTTCTCTTTTTTCTTTTCTACAAAATTTCCCTTTCTTCTTTATTTATTTATTTATTAAATATACTATTTAACTTCCTTAATCTATTTAATTTTCACATTTCTTTATATTTTAATCACATTCTATAATTATTCATACTTTACATTTCTTCTACTTATCCATGGCTAAATCAAACCACCAAACATATTTAAAATTTTAATTTCATATCATTATTGTTTAGAGTTTGAGCAAGATTTATTTAAATAAAATATAAAGGGTCAACTTTAGAACTATAAATTGAAATATTTTCTCATTATATTTTTCCTCTATTTTCATAGAGTAAAATTTTTGTCCATGTCTTCTTTGAACAACCAAAAGAAATGTGCAGGAACGACTCATTAATCAAACACCCAATTCGTAAATCTCGAACCAAAACCAGACGACCCAAATTCCTCAGTCTTCGATTACAGTTAACTTCTCCCAAATCACCACCGATGATCCACCACCCACCACTGCCACCGCCACCTCCTCCGCCTCAGAAACAGCTAACTCTGTTTCCCCTGCATCCGGAGAATCTACAAGTAGAAGACAGAGAAGACGACGTCGCCTTCATCTTCGAAAACGACGATGTCGTAAGTAGCAGCTGCTGCAGCTTACAAAGCTTTCTCCCATGTTACCAAAACGAGATGTCATCGGAGGAAGAGTCTCGGAATTTGGTGGAGGAGGCAGAGCTTGTACGGACGGCGATGAGGAACAGAGAAAGGGAAACGGGGGTGGAGGAGAAATGGGTTTGTTATTCGGAAGTGGTGGAGAAGAAGGAGGAGGAAGTGACGAGTACGGCGGCGGATGAGTGGGTTAAGAAGGTTAAGATGATGAAGAAGAAGAAGAAGAAGAAGAAGATTAAGATGGAGATGATTGGGAAACAGTTATGGTTGAAGCTTGATTATGAAGGGATATTGAACGCTTGGCCTGATAAAGCTCCTCTGTTCATCAATGGAGAATCACCTCAGACCGTTCCTGATCTTCATGATGATCCATATCTCTGCTCTGATTCTCTTCTTAGTGTAAGATCTCTTCTCTTCTTTTCCCATTTATTAGCTTAATGTTTGATAATGTAATACATAAAATTAGAGTCTATAGATTTAGATTTAGTTTAGAAAAGTGTATTTCCTGTCTATTAATCATTCTAAATTACTTTAATGTTTAGTTTTAGACTTTCAAAACCTAACTTTCATCCACTCTTTTTAATCATTTCAAACTCCCTTCTAAACATTTTCACAAAAATCATTCAATTCAGCTTGATTTTGAAATGATTAATATCCTTTTGAAATATGATCTTAGAAATTTCAAAAACACTATCAATATATTAGTATCTCTCATTGATTAAAAGCACTTTTGTATACTTTCACATTGTCATTAGACACCAGAACTATATTCATAAATCATAATCATCACAAACAAGTAAAGTAATTTATTTTAATGATTTCAAACTAACTTCTAAATATACTTGTTAATAGTTAAGAGAGACACGAATTTGTGTGTCTTACGTGAACACTCTTATAATCTATATAAGCAATTTTAGGAGAGTGATATACCAGAATAAGTTCTTTTTCTGAAAAGCAATGTTTATTTAAAAATTTTATAAGTATTTAAACCCTATTTTCTTATGATTTCATTTCGACCGTTTCAAATTCATCTTTTAACATGGGTACTAATTGTCACACATTGAATTTTGTAAATCAAATAAATCAAAACCAAAAAGCAGATAAGAGAAAAAAAAAAGAGTTAGAAATATAAGCTTTTTGTATTCTAATCATAGTTTTGGTATTCAGAGAGGGAAGTGAATTCAGTGTTTGGGCTATGAGGTGCAGTCCAATCCTATAAATACCAATACTTGTGGGGACAAAAAGGATATACTTCAAATTTAAAAGGGGTAGATGTGAAAACTAATTTATCAGCTTTCCAAAAGTAGAAAATAGTTTTTCATTCATATACATACCTTTCTGAATTCCTTGATTTTAAAGCTTATTTGATACTTTTTTTTTGTTTTTTAAATTTTGTTTCAATATCTTTCATGACATATCCTTTTCTATATATATATAAATATATGTTTTGTTTTATGGCTACATTGTTTTTGTTACTATTTTAAAAATAATACAAAAAAAACCTATAACAAGATTATTAAATAAATCTTTAATATTTGAATAAATCTATTGAGGGACTAAACTAATGAGAGTAAGAGGAAAATTAAACAATTGAAAATATAGAAAGTAAAATGAAACAAACATTGAAATATGAGAACCAAAATGATAACTTTTTTTAAAGATTAAATGTTATATATGAACAAGTATGTATATAGGAATGATATAGAAGCAGAATGTTATATGTTATATTGAATTGAAGATTATATTTGTGTTTGTATACAGAGAAATGTGATGGATGGAATAGGAAGTGAAGGGCATAATAGCAGTAACAATACTAATAACAATAGCAGCAGTAATGTGTGGAAAGTCCCAGAAATTGGAATAATGAAGAAAGAAGAATTGATATTAGAAGGAAAAGAAGGATGGAAAATGGGCCAGAGAGAGGCGAGTGTTTTGAGATACAAAGAAAAAAGGCAAAGCCGTCTTTTCTCCAAACGTATTCGCTATGAAGTCAGAAAACTCAATGCTGAAAAGCGTCCCAGAATGAAGGTATACTCCCACCCCTTTCATTACAATTTTCATTTTACTAATTCATTTTATCGTTTCATTACAATATTAGTAGATATAATACAACCTAAAAGAATTTGTAAATAAAATACATTTTAGATTTAACTCTCACAATCTGTAAATGTGTATATTGTTTTAGAAGTCTACCGCTCATACGTACATCTTGTCATATTTACAATTCTTTGTAAAGTTATTGTTCACTTAGGACGTGTTTTATGAGTTATATTGAAGTGGGTATGTATGGTAATGCAGTCCAAAACTAACTTTTAGATTTGATTTGTAAAATTCATTTCCATTTTATCTTTAACTACTCACTCGTATCAACGATACTCTCTAATCTAAATTGTTGGCTGTAAAAGCACTCTTTATTATAATTACATTGTGAAATTGAATAGAATAATTTGGTTTGAATTGAGTTTGATGTTGGTTTTGCAGGGTCGTTTTGTGAAAAGAAGTTGAGAAAGTGAAGAAACATATCATTTTGGACATAAAGGGCATTCCAGGAAATGCAGCAATGTAGTGTTCTCTTTTCTTCTTTTAAAATAATTTCATTGTTTTTTTTTTCTCTCTACTT

mRNA sequence

ATGTGCAGGAACGACTCATTAATCAAACACCCAATTCGTAAATCTCGAACCAAAACCAGACGACCCAAATTCCTCAGTCTTCGATTACAGTTAACTTCTCCCAAATCACCACCGATGATCCACCACCCACCACTGCCACCGCCACCTCCTCCGCCTCAGAAACAGCTAACTCTGTTTCCCCTGCATCCGGAGAATCTACAAGTAGAAGACAGAGAAGACGACGTCGCCTTCATCTTCGAAAACGACGATGTCGTAAGTAGCAGCTGCTGCAGCTTACAAAGCTTTCTCCCATGTTACCAAAACGAGATGTCATCGGAGGAAGAGTCTCGGAATTTGGTGGAGGAGGCAGAGCTTGTACGGACGGCGATGAGGAACAGAGAAAGGGAAACGGGGGTGGAGGAGAAATGGGTTTGTTATTCGGAAGTGGTGGAGAAGAAGGAGGAGGAAGTGACGAGTACGGCGGCGGATGAGTGGGTTAAGAAGGTTAAGATGATGAAGAAGAAGAAGAAGAAGAAGAAGATTAAGATGGAGATGATTGGGAAACAGTTATGGTTGAAGCTTGATTATGAAGGGATATTGAACGCTTGGCCTGATAAAGCTCCTCTGTTCATCAATGGAGAATCACCTCAGACCGTTCCTGATCTTCATGATGATCCATATCTCTGCTCTGATTCTCTTCTTAGTAGAAATGTGATGGATGGAATAGGAAGTGAAGGGCATAATAGCAGTAACAATACTAATAACAATAGCAGCAGTAATGTGTGGAAAGTCCCAGAAATTGGAATAATGAAGAAAGAAGAATTGATATTAGAAGGAAAAGAAGGATGGAAAATGGGCCAGAGAGAGGCGAGTGTTTTGAGATACAAAGAAAAAAGGCAAAGCCGTCTTTTCTCCAAACGTATTCGCTATGAAGTCAGAAAACTCAATGCTGAAAAGCGTCCCAGAATGAAGGGTCGTTTTGTGAAAAGAAGTTGA

Coding sequence (CDS)

ATGTGCAGGAACGACTCATTAATCAAACACCCAATTCGTAAATCTCGAACCAAAACCAGACGACCCAAATTCCTCAGTCTTCGATTACAGTTAACTTCTCCCAAATCACCACCGATGATCCACCACCCACCACTGCCACCGCCACCTCCTCCGCCTCAGAAACAGCTAACTCTGTTTCCCCTGCATCCGGAGAATCTACAAGTAGAAGACAGAGAAGACGACGTCGCCTTCATCTTCGAAAACGACGATGTCGTAAGTAGCAGCTGCTGCAGCTTACAAAGCTTTCTCCCATGTTACCAAAACGAGATGTCATCGGAGGAAGAGTCTCGGAATTTGGTGGAGGAGGCAGAGCTTGTACGGACGGCGATGAGGAACAGAGAAAGGGAAACGGGGGTGGAGGAGAAATGGGTTTGTTATTCGGAAGTGGTGGAGAAGAAGGAGGAGGAAGTGACGAGTACGGCGGCGGATGAGTGGGTTAAGAAGGTTAAGATGATGAAGAAGAAGAAGAAGAAGAAGAAGATTAAGATGGAGATGATTGGGAAACAGTTATGGTTGAAGCTTGATTATGAAGGGATATTGAACGCTTGGCCTGATAAAGCTCCTCTGTTCATCAATGGAGAATCACCTCAGACCGTTCCTGATCTTCATGATGATCCATATCTCTGCTCTGATTCTCTTCTTAGTAGAAATGTGATGGATGGAATAGGAAGTGAAGGGCATAATAGCAGTAACAATACTAATAACAATAGCAGCAGTAATGTGTGGAAAGTCCCAGAAATTGGAATAATGAAGAAAGAAGAATTGATATTAGAAGGAAAAGAAGGATGGAAAATGGGCCAGAGAGAGGCGAGTGTTTTGAGATACAAAGAAAAAAGGCAAAGCCGTCTTTTCTCCAAACGTATTCGCTATGAAGTCAGAAAACTCAATGCTGAAAAGCGTCCCAGAATGAAGGGTCGTTTTGTGAAAAGAAGTTGA

Protein sequence

MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFPLHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVRTAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS*

Homology

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BLAST of CsaV3_5G026860 vs. NCBI nr
Match: XP_004142772.2 (zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus] >KGN51334.1 hypothetical protein Csa_007899 [Cucumis sativus])

HSP 1 Score: 623.6 bits (1607), Expect = 9.4e-175
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP 60
           MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP
Sbjct: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP 60

Query: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 120
           LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR
Sbjct: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 120

Query: 121 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIG 180
           TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIG
Sbjct: 121 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIG 180

Query: 181 KQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGH 240
           KQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGH
Sbjct: 181 KQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGH 240

Query: 241 NSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKR 300
           NSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKR
Sbjct: 241 NSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKR 300

Query: 301 IRYEVRKLNAEKRPRMKGRFVKRS 325
           IRYEVRKLNAEKRPRMKGRFVKRS
Sbjct: 301 IRYEVRKLNAEKRPRMKGRFVKRS 324

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BLAST of CsaV3_5G026860 vs. NCBI nr
Match: XP_008458850.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis melo])

HSP 1 Score: 584.3 bits (1505), Expect = 6.3e-163
Identity = 311/327 (95.11%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP 60
           MC NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPK PPMIHHPP PPPPPPPQKQLTLFP
Sbjct: 1   MCNNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKLPPMIHHPPPPPPPPPPQKQLTLFP 60

Query: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 120
           LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLP YQNEMSSEEESRNL EEAELVR
Sbjct: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPSYQNEMSSEEESRNLAEEAELVR 120

Query: 121 TAMRNRER-ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMI 180
           TAMRNRER ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKK+K M KKKKKKKIKMEMI
Sbjct: 121 TAMRNRERPETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKIKTM-KKKKKKKIKMEMI 180

Query: 181 GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEG 240
           GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEG
Sbjct: 181 GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEG 240

Query: 241 HNSSNN--TNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLF 300
           HNSSNN   NN+SSSNVWKVPEIGI+KKE L+LEGKEGWKMGQREASVLRYKEKRQSRLF
Sbjct: 241 HNSSNNNYNNNSSSSNVWKVPEIGILKKEGLMLEGKEGWKMGQREASVLRYKEKRQSRLF 300

Query: 301 SKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           SKRIRYEVRKLNAEKRPRMKGRFVKRS
Sbjct: 301 SKRIRYEVRKLNAEKRPRMKGRFVKRS 326

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BLAST of CsaV3_5G026860 vs. NCBI nr
Match: XP_038889499.1 (zinc finger protein CONSTANS-LIKE 16-like [Benincasa hispida])

HSP 1 Score: 482.3 bits (1240), Expect = 3.4e-132
Identity = 268/330 (81.21%), Postives = 285/330 (86.36%), Query Frame = 0


Query: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHP--PLPPPPPPPQKQLTL 60
           MC NDSLIKHPIRKSRTKTRRPKFLSLR +L SPK  PMIHHP  P PPPP PPQKQLTL
Sbjct: 1   MCNNDSLIKHPIRKSRTKTRRPKFLSLRSELISPKFTPMIHHPPQPSPPPPTPPQKQLTL 60

Query: 61  FPLHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAEL 120
           FPLHPENLQ+EDRE++V FIFEN DVVSSSCCSLQSFLP YQN+MSSEEESRNL EEA L
Sbjct: 61  FPLHPENLQMEDREENVVFIFEN-DVVSSSCCSLQSFLPSYQNDMSSEEESRNLAEEAAL 120

Query: 121 VRTAMRNRERETGVEEKWVCYSEVVEKKE----EEVTSTAADEWVKKVKMMKKKKKKKKI 180
           VRTAMR+RER+TGVEEKWVCYSEVVEK E    EEVTSTAADEWVKK+   KKKK KKK+
Sbjct: 121 VRTAMRSRERQTGVEEKWVCYSEVVEKTEEVEVEEVTSTAADEWVKKINKNKKKKIKKKV 180

Query: 181 KMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDG 240
             EM+GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDL DDP LCSDSL +RNVMDG
Sbjct: 181 --EMMGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLRDDPNLCSDSLPNRNVMDG 240

Query: 241 IGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQS 300
           +GSEGHNS+NN       NVWKVPE+GI+KKE +         +GQREASVLRYKEKRQS
Sbjct: 241 MGSEGHNSNNN-------NVWKVPEMGILKKEYI---------LGQREASVLRYKEKRQS 300

Query: 301 RLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           RLFSKRIRYEVRKLNAEKRPRMKGRFVKRS
Sbjct: 301 RLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 311

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BLAST of CsaV3_5G026860 vs. NCBI nr
Match: KAA0037623.1 (zinc finger protein CONSTANS-LIKE 6 [Cucumis melo var. makuwa] >TYK22770.1 zinc finger protein CONSTANS-LIKE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 418.7 bits (1075), Expect = 4.6e-113
Identity = 220/229 (96.07%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP 60
           MC NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPK PPMIHHPP PPPPPPPQKQLTLFP
Sbjct: 1   MCNNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKLPPMIHHPPPPPPPPPPQKQLTLFP 60

Query: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 120
           LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLP YQNEMSSEEESRNL EEAELVR
Sbjct: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPSYQNEMSSEEESRNLAEEAELVR 120

Query: 121 TAMRNRER-ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMI 180
           TAMRNRER ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKK+K M KKKKKKKIKMEMI
Sbjct: 121 TAMRNRERPETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKIKTM-KKKKKKKIKMEMI 180

Query: 181 GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLS 229
           GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLS
Sbjct: 181 GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLS 228

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BLAST of CsaV3_5G026860 vs. NCBI nr
Match: XP_023526082.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.4 bits (921), Expect = 3.3e-95
Identity = 223/327 (68.20%), Postives = 245/327 (74.92%), Query Frame = 0


Query: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPK---SPPMIHHPPLPPPPPPPQKQLTLFP 63
           +DS+I+ PIRKSRTKTRRPKFLSLR +L SP+     PM H P    PPPPPQKQLTLFP
Sbjct: 13  HDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTHDP--SAPPPPPQKQLTLFP 72

Query: 64  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 123
           LHPENL VEDRE++VA +FEND  V SSCCSL SFLP Y N++SSEEESRNL EEA LVR
Sbjct: 73  LHPENL-VEDREENVALMFEND--VVSSCCSLGSFLPTYHNDVSSEEESRNLAEEAALVR 132

Query: 124 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAA--DEWVKKV-KMMKKKKKKKKIKME 183
           TAMR+RERETG EEKWVCYSEVVEKKEE   + AA  +E V++V     KKKKKKK K+E
Sbjct: 133 TAMRSRERETGAEEKWVCYSEVVEKKEEPSWTAAAAEEEEVEEVTSTATKKKKKKKKKVE 192

Query: 184 MIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGS 243
           M GKQL LKLDYEGILNAW DKAPLFINGESPQTVP+LHDD      S+   N    +GS
Sbjct: 193 MRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD-----GSVWEENRRSKMGS 252

Query: 244 EGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLF 303
           EG             NVWKVPEI              GWK+G REASVLRYKEKRQSRLF
Sbjct: 253 EG-----------GGNVWKVPEI--------------GWKVGGREASVLRYKEKRQSRLF 304

Query: 304 SKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           SKRIRY+VRKLNAEKRPRMKGRFVKR+
Sbjct: 313 SKRIRYQVRKLNAEKRPRMKGRFVKRN 304

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BLAST of CsaV3_5G026860 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-12
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0


Query: 275 GWKMGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           G   G+REA VLRYKEKR++RLFSK+IRYEVRKLNAE+RPR+KGRFVKR+
Sbjct: 339 GGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRT 388

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BLAST of CsaV3_5G026860 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-10
Identity = 89/285 (31.23%), Postives = 128/285 (44.91%), Query Frame = 0


Query: 59  FPLHPENLQVEDREDD------VAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEE---- 118
           FP+ P + +  D EDD      +  +F  D  ++     +++ L     E  S EE    
Sbjct: 148 FPMMPLSFKSSDEEDDDNAESCLNGLFPTDMELAQFTADVETLLGGGDREFHSIEELGLG 207

Query: 119 -----SRNLVEEAELVRTAMRNRER--ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKK 178
                 +  VEE  +V   + +++   ET   E    Y    +   +E      ++ +K 
Sbjct: 208 EMLKIEKEEVEEEGVVTREVHDQDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKN 267

Query: 179 VKMMKKKKKKKKIKMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQT--VPDLHDDP 238
           V  M   +    IK E   K L L+LDYE +++ W  +         P T  VP   D  
Sbjct: 268 VMEMGVNEMSGGIKEEKKEKALMLRLDYESVISTWGGQG-------IPWTARVPSEIDLD 327

Query: 239 YLCSDSLLSRNVMDGIGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMG 298
            +C       + M   G+E H+ ++               +G+         G  G   G
Sbjct: 328 MVC----FPTHTMGESGAEAHHHNHFRG------------LGLHL-------GDAG--DG 387

Query: 299 QREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
            REA V RY+EKR++RLFSK+IRYEVRKLNAEKRPRMKGRFVKRS
Sbjct: 388 GREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 400

[Close]

BLAST of CsaV3_5G026860 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.4e-10
Identity = 33/45 (73.33%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 280 QREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           +REA V RY++KR++RLF K+IRYEVRK+NA+KRPRMKGRFV+RS
Sbjct: 270 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 314

[Close]

BLAST of CsaV3_5G026860 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-08
Identity = 79/283 (27.92%), Postives = 124/283 (43.82%), Query Frame = 0


Query: 59  FPLHPENLQVEDREDDVAF----IFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVE 118
           FP+    L +E+ ED+        F  D  +      +++ L    +  S   E   L  
Sbjct: 155 FPMIRSGLMIEEEEDNAESCLNGFFPTDMELEEFAADVETLLGRGLDTESYAMEELGL-S 214

Query: 119 EAELVRTAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKK-- 178
            +E+ +  +   E E  VEE      ++ +   ++V  T   E     +   K  +++  
Sbjct: 215 NSEMFK--IEKDEIEEEVEEIKAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSEEEVM 274

Query: 179 -----------KIKMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYL 238
                      K+K E     L L+L+Y+ +++ W  + P + +GE P+   D+   P  
Sbjct: 275 KNVESSGECVVKVKEEEHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWP-- 334

Query: 239 CSDSLLSRNVMDGIGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQR 298
                 + ++++  G   H          SS                      G+  G R
Sbjct: 335 ------AFSMVENGGESTHQKQYVGGCLPSS----------------------GFGDGGR 394

Query: 299 EASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           EA V RY+EKR++RLFSK+IRYEVRKLNAEKRPRMKGRFVKR+
Sbjct: 395 EARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 404

[Close]

BLAST of CsaV3_5G026860 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-08
Identity = 66/203 (32.51%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 121 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIG 180
           TA+   + E    +K V   E   KK+++   T     + + K ++  ++    +   + 
Sbjct: 278 TAISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPL- 337

Query: 181 KQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGH 240
               LKLDY+G+L AW DK   F         PD                  +  GSE  
Sbjct: 338 ----LKLDYDGVLEAWSDKTSPF---------PD------------------EIQGSEAV 397

Query: 241 NSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKR 300
           + +                    +  ++ L G      G REASVLRYKEKR++RLFSK+
Sbjct: 398 DVN-------------------ARLAQIDLFGDS----GMREASVLRYKEKRRTRLFSKK 425

Query: 301 IRYEVRKLNAEKRPRMKGRFVKR 324
           IRY+VRKLNA++RPRMKGRFV+R
Sbjct: 458 IRYQVRKLNADQRPRMKGRFVRR 425

[Close]

BLAST of CsaV3_5G026860 vs. ExPASy TrEMBL
Match: A0A0A0KR00 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517810 PE=4 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 4.6e-175
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP 60
           MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP
Sbjct: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP 60

Query: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 120
           LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR
Sbjct: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 120

Query: 121 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIG 180
           TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIG
Sbjct: 121 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMIG 180

Query: 181 KQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGH 240
           KQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGH
Sbjct: 181 KQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGH 240

Query: 241 NSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKR 300
           NSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKR
Sbjct: 241 NSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKR 300

Query: 301 IRYEVRKLNAEKRPRMKGRFVKRS 325
           IRYEVRKLNAEKRPRMKGRFVKRS
Sbjct: 301 IRYEVRKLNAEKRPRMKGRFVKRS 324

[Close]

BLAST of CsaV3_5G026860 vs. ExPASy TrEMBL
Match: A0A1S3C8T7 (zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo OX=3656 GN=LOC103498130 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 3.1e-163
Identity = 311/327 (95.11%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP 60
           MC NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPK PPMIHHPP PPPPPPPQKQLTLFP
Sbjct: 1   MCNNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKLPPMIHHPPPPPPPPPPQKQLTLFP 60

Query: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 120
           LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLP YQNEMSSEEESRNL EEAELVR
Sbjct: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPSYQNEMSSEEESRNLAEEAELVR 120

Query: 121 TAMRNRER-ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMI 180
           TAMRNRER ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKK+K M KKKKKKKIKMEMI
Sbjct: 121 TAMRNRERPETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKIKTM-KKKKKKKIKMEMI 180

Query: 181 GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEG 240
           GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEG
Sbjct: 181 GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEG 240

Query: 241 HNSSNN--TNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLF 300
           HNSSNN   NN+SSSNVWKVPEIGI+KKE L+LEGKEGWKMGQREASVLRYKEKRQSRLF
Sbjct: 241 HNSSNNNYNNNSSSSNVWKVPEIGILKKEGLMLEGKEGWKMGQREASVLRYKEKRQSRLF 300

Query: 301 SKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           SKRIRYEVRKLNAEKRPRMKGRFVKRS
Sbjct: 301 SKRIRYEVRKLNAEKRPRMKGRFVKRS 326

[Close]

BLAST of CsaV3_5G026860 vs. ExPASy TrEMBL
Match: A0A5A7T3R9 (Zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00030 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 2.2e-113
Identity = 220/229 (96.07%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MCRNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKSPPMIHHPPLPPPPPPPQKQLTLFP 60
           MC NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPK PPMIHHPP PPPPPPPQKQLTLFP
Sbjct: 1   MCNNDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPKLPPMIHHPPPPPPPPPPQKQLTLFP 60

Query: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 120
           LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLP YQNEMSSEEESRNL EEAELVR
Sbjct: 61  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPSYQNEMSSEEESRNLAEEAELVR 120

Query: 121 TAMRNRER-ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKIKMEMI 180
           TAMRNRER ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKK+K M KKKKKKKIKMEMI
Sbjct: 121 TAMRNRERPETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKIKTM-KKKKKKKIKMEMI 180

Query: 181 GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLS 229
           GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLS
Sbjct: 181 GKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLS 228

[Close]

BLAST of CsaV3_5G026860 vs. ExPASy TrEMBL
Match: A0A6J1E890 (protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430299 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 1.1e-93
Identity = 220/330 (66.67%), Postives = 240/330 (72.73%), Query Frame = 0


Query: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPK---SPPMIHHPPLPPPPPPPQKQLTLFP 63
           +DS+I+ PIRKSRTKTRRPKFLSLR +L SP+     PM H     P  PPPQKQLTLFP
Sbjct: 13  HDSVIQRPIRKSRTKTRRPKFLSLRSELISPRISQISPMTH----DPSAPPPQKQLTLFP 72

Query: 64  LHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEESRNLVEEAELVR 123
           LHPENL VEDRE++VA +FEND  V SSCCSL SFLP Y N+MSSEEESRNL EEA LVR
Sbjct: 73  LHPENL-VEDREENVALMFEND--VVSSCCSLGSFLPTYHNDMSSEEESRNLAEEAALVR 132

Query: 124 TAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAA------DEWVKKVKMMKKKKKKKKI 183
           TAMR+RERE G EEKWVCYSEVVEKKEE   + AA      +E V++V     KKKKKK 
Sbjct: 133 TAMRSREREAGAEEKWVCYSEVVEKKEEPSWTAAAAAAEEEEEEVEEVTSTATKKKKKKK 192

Query: 184 KMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDG 243
           K+EM GKQL LKLDYEGILNAW DKAPLFINGESPQTVP+LHDD      S    N    
Sbjct: 193 KVEMRGKQLRLKLDYEGILNAWSDKAPLFINGESPQTVPNLHDD-----GSAWEENRRSK 252

Query: 244 IGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQS 303
           +GSEG             NVWKVPEI              GWK+G REASVLRYKEKRQS
Sbjct: 253 MGSEG-----------GGNVWKVPEI--------------GWKVGGREASVLRYKEKRQS 305

Query: 304 RLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           RLFSKRIRY+VRKLNAEKRPRMKGRFVKR+
Sbjct: 313 RLFSKRIRYQVRKLNAEKRPRMKGRFVKRN 305

[Close]

BLAST of CsaV3_5G026860 vs. ExPASy TrEMBL
Match: A0A6J1BVT1 (zinc finger protein CONSTANS-LIKE 6 OS=Momordica charantia OX=3673 GN=LOC111006195 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 9.7e-93
Identity = 231/337 (68.55%), Postives = 253/337 (75.07%), Query Frame = 0


Query: 4   NDSLIKHPIRKSRTKTRRPKFLSLRLQLTSPK-SPPMIHHPPLPPPPPPPQKQLTLFPLH 63
           N+S+IKHPIRK RTKTRRPKFLSL L+LT P+ S PM   P  P      Q+QLTLFPLH
Sbjct: 17  NNSVIKHPIRKIRTKTRRPKFLSLLLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLH 76

Query: 64  PENLQVEDR----EDDVAFIFENDDVVSSSCCSLQ--SFLPCYQNEMSS-EEESRNLV-- 123
           PEN+ VEDR    +++VA +F +D  V SSCCSLQ  SFLP YQN+MSS EEESRNLV  
Sbjct: 77  PENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFLPSYQNDMSSTEEESRNLVGG 136

Query: 124 EEAE----LVRTAMRNRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVKMMKKKK 183
            EAE    LVR AMR+RERE   EEKWVCYSEVVEKKEEEVTSTAADEWV+     KK  
Sbjct: 137 REAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVE-----KKYI 196

Query: 184 KKKKIKMEMIGKQLW--LKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLL 243
            KKK KME+IGKQ    LKLDYEGILNAW DKAPL+INGESPQTVP+LHDD    SDSL 
Sbjct: 197 NKKKNKMEIIGKQKQPRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLP 256

Query: 244 SRNVMDGIGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLR 303
           +R    G+GSEG  +SNN NN    NVWKVPE+             EGWKMGQREASVLR
Sbjct: 257 NR--CCGMGSEG--NSNNNNN----NVWKVPEM-------------EGWKMGQREASVLR 316

Query: 304 YKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           YKEKRQSRLFSKRIRY+VRKLNAEKRPRMKGRFVKRS
Sbjct: 317 YKEKRQSRLFSKRIRYQVRKLNAEKRPRMKGRFVKRS 324

[Close]

BLAST of CsaV3_5G026860 vs. TAIR 10
Match: AT5G14370.1 (CCT motif family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-27
Identity = 123/340 (36.18%), Postives = 161/340 (47.35%), Query Frame = 0


Query: 13  RKSRTKTRRPKFLSLRLQLT----------SPKSPPMIHH-------PPLPPPPPPPQKQ 72
           RK RTKT++PKFLSL+L+L           S KS    ++        P   P    ++ 
Sbjct: 47  RKIRTKTKKPKFLSLKLELNTSHEINENPRSKKSKKKNNNKKQSKKKEPDTTPFKEKKRA 106

Query: 73  LTLFPLHPENLQVEDREDDVAFIFENDDVVSSSCCSLQSFLPC----------YQNEMSS 132
            T   L     + E  +   A++F  +    S+  S+   LP            +N +S 
Sbjct: 107 ETTTTLGGGEKEEEQYDTVAAYLF--NSATDSTISSIHDLLPSSAATDVDCGGERNNLSP 166

Query: 133 EEESRNLVEEAELVRTAMRN--RERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKKVK 192
            +   +    + L+RTAMR    E E   EE+WV YSEVV    EEV S +         
Sbjct: 167 YDRQDHGSSSSSLLRTAMRKGASEEEETTEERWVSYSEVV----EEVMSRSGTPRCCGGG 226

Query: 193 MMKKKKKKKKIKMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCS 252
                +             L LKLDYE I+ AW DK  L+++GE PQTVPDLH       
Sbjct: 227 DGNDGR-----------PSLALKLDYEQIMEAWSDKGTLYVDGEPPQTVPDLH------- 286

Query: 253 DSLLSRNVMDGIGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREA 312
                        ++G N     +   + N+W VPE          +E  E    G REA
Sbjct: 287 -----------ASADGFN-----DGGEAGNLWAVPE----------METTERLWRGHREA 336

Query: 313 SVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKR 324
           S+LRYKEKRQ+RLFSKRIRY+VRKLNAEKRPR+KGRFVKR
Sbjct: 347 SLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336

[Close]

BLAST of CsaV3_5G026860 vs. TAIR 10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 75.5 bits (184), Expect = 8.9e-14
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0


Query: 275 GWKMGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
           G   G+REA VLRYKEKR++RLFSK+IRYEVRKLNAE+RPR+KGRFVKR+
Sbjct: 339 GGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRT 388

[Close]

BLAST of CsaV3_5G026860 vs. TAIR 10
Match: AT1G07050.1 (CCT motif family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0


Query: 262 IMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFV 321
           + + E  ++E K   +   REASVLRYKEKRQSRLFSK+IRY+VRKLNA+KRPR KGRFV
Sbjct: 135 VYRGEVPVIEEKRNMR---REASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFV 193

Query: 322 KR 324
           KR
Sbjct: 195 KR 193

[Close]

BLAST of CsaV3_5G026860 vs. TAIR 10
Match: AT4G25990.1 (CCT motif family protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-13
Identity = 76/201 (37.81%), Postives = 97/201 (48.26%), Query Frame = 0


Query: 140 SEVVEKKEEEVTSTAADEWVKKVKMMKKKKKKKKI-----------------KMEMIGKQ 199
           S VV+  + +   TA  +     K  KKKKKKKK+                 K+E     
Sbjct: 237 SNVVDSSKIKTIVTAEGD-----KKKKKKKKKKKVAPAAAESKSSEVTDSNPKLEQRVSP 296

Query: 200 LWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLCSDSLLSRNVMDGIGSEGHNS 259
           L LKLDY+G+L AW  K       ESP             SD +L     D  G + H  
Sbjct: 297 L-LKLDYDGVLEAWSGK-------ESP------------FSDEILG---SDADGVDFH-- 356

Query: 260 SNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMGQREASVLRYKEKRQSRLFSKRIR 319
                               ++  E+ L G+     G REASVLRYKEKR++RLFSK+IR
Sbjct: 357 --------------------VRLGEIDLFGES----GMREASVLRYKEKRRNRLFSKKIR 383

Query: 320 YEVRKLNAEKRPRMKGRFVKR 324
           Y+VRKLNA++RPRMKGRFV+R
Sbjct: 417 YQVRKLNADQRPRMKGRFVRR 383

[Close]

BLAST of CsaV3_5G026860 vs. TAIR 10
Match: AT1G68520.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-11
Identity = 89/285 (31.23%), Postives = 128/285 (44.91%), Query Frame = 0


Query: 59  FPLHPENLQVEDREDD------VAFIFENDDVVSSSCCSLQSFLPCYQNEMSSEEE---- 118
           FP+ P + +  D EDD      +  +F  D  ++     +++ L     E  S EE    
Sbjct: 148 FPMMPLSFKSSDEEDDDNAESCLNGLFPTDMELAQFTADVETLLGGGDREFHSIEELGLG 207

Query: 119 -----SRNLVEEAELVRTAMRNRER--ETGVEEKWVCYSEVVEKKEEEVTSTAADEWVKK 178
                 +  VEE  +V   + +++   ET   E    Y    +   +E      ++ +K 
Sbjct: 208 EMLKIEKEEVEEEGVVTREVHDQDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKN 267

Query: 179 VKMMKKKKKKKKIKMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQT--VPDLHDDP 238
           V  M   +    IK E   K L L+LDYE +++ W  +         P T  VP   D  
Sbjct: 268 VMEMGVNEMSGGIKEEKKEKALMLRLDYESVISTWGGQG-------IPWTARVPSEIDLD 327

Query: 239 YLCSDSLLSRNVMDGIGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKEGWKMG 298
            +C       + M   G+E H+ ++               +G+         G  G   G
Sbjct: 328 MVC----FPTHTMGESGAEAHHHNHFRG------------LGLHL-------GDAG--DG 387

Query: 299 QREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 325
            REA V RY+EKR++RLFSK+IRYEVRKLNAEKRPRMKGRFVKRS
Sbjct: 388 GREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 400

The following BLAST results are available for this feature:

BLAST of CsaV3_5G026860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142772.2	9.4e-175	100.00	zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus] >KGN51334.1 hypothetical p...	[more]
XP_008458850.1	6.3e-163	95.11	PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis melo]	[more]
XP_038889499.1	3.4e-132	81.21	zinc finger protein CONSTANS-LIKE 16-like [Benincasa hispida]	[more]
KAA0037623.1	4.6e-113	96.07	zinc finger protein CONSTANS-LIKE 6 [Cucumis melo var. makuwa] >TYK22770.1 zinc ...	[more]
XP_023526082.1	3.3e-95	68.20	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G026860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9A9	1.3e-12	78.00	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q8LG76	2.0e-10	31.23	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9M9B3	3.4e-10	73.33	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]
Q8RWD0	1.1e-08	27.92	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q9LU68	3.2e-08	32.51	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]

BLAST of CsaV3_5G026860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR00	4.6e-175	100.00	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517810 PE=4 SV...	[more]
A0A1S3C8T7	3.1e-163	95.11	zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo OX=3656 GN=LOC103498130 PE=4...	[more]
A0A5A7T3R9	2.2e-113	96.07	Zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1E890	1.1e-93	66.67	protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1BVT1	9.7e-93	68.55	zinc finger protein CONSTANS-LIKE 6 OS=Momordica charantia OX=3673 GN=LOC1110061...	[more]

BLAST of CsaV3_5G026860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14370.1	1.8e-27	36.18	CCT motif family protein	[more]
AT1G73870.1	8.9e-14	78.00	B-box type zinc finger protein with CCT domain	[more]
AT1G07050.1	1.2e-13	67.74	CCT motif family protein	[more]
AT4G25990.1	2.6e-13	37.81	CCT motif family protein	[more]
AT1G68520.1	1.4e-11	31.23	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 281..323 e-value: 4.1E-18 score: 65.2
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 281..323 score: 15.755179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..253
None	No IPR available	PANTHER	PTHR31874:SF25	CCT MOTIF FAMILY PROTEIN	coord: 9..324
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 9..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G026860.1	CsaV3_5G026860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding