CsaV3_5G026740 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G026740
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptiontranscription initiation factor TFIID subunit 7
Locationchr5: 21839251 .. 21844878 (-)
RNA-Seq ExpressionCsaV3_5G026740
SyntenyCsaV3_5G026740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAATACGCACTCTATTCTGGATTGGAAGCCAAAAAACAAGGCATTAGGCCATGAAGACTCTCAAGCACTTTCTAAAACAACACACCAAGCCAAGAAGGTAGCTAGATAAGACCATCCTTCTGCCCAATATCAAAAGTAATCACGAAAAAGCAACTAAATCCGTAGAAATGGAAGGTCAGTTGCACTCCCACGAGGACAAAAAGAAATGATCGTTTTATTTTGCTGTAGTTTTTAAAAATGTTTCTTTCAATATTTAAAAGAAATTAGAATTTTATTTTCAATTAAATTTTTAAAATTGGGTTTAAATAACTAATAAGATGGAGTTTTCCGGATCTTCTTCGTCTCACGAGTCTCCACTCCCTCCCCCGCGCAATCGGTATCCATATCCTTCCATCTCTTTCTCTTGCTCGTCGCTCGCCGCCGTCAATCATCAAAAGAAGGGAACAGTTTTACTCTCTCTTGTGCGAGGCCTGTTTCAAGTTCGAACCAAATAATAGAAAACTTCATACAATAACTTTCCAGCATTCAAGGTAATTGGCAACCCAAGATTGTGTTTTCAAATTGAATGAATTGAACCAATTTTTGTTTCGAGACCCATTTGTGTGCAGATTTGATTATCCAAAATACACTATTTTTAGAATCCCATTTCTATGTTTTCAGCCTTTTGAAGTCTATATCCGAAAATTCAATCCGTGAGGCGTAGGTGTAGGTTTTTTCTGAGACCAGAAAGAAGCGTAGCTCGAGGGATAGAGGTTTTCTTCTTCTCATCGCATTGTGTATGGAGTTATTTTGCTAGATAATAGATAATTGATTTTGTTAAGTCCGAGTAACTGTTCGTTGGATAATGTTTCTTCCTGTAGAGTTTGGTTAGGGCCAGATTTTCTTTCATTATCCTCTTATTGTCCAACTTTTTGATTGTGGGAAATTTTTGTACATGATTGATACTGGGCCTTTATGAAATCTAATATTACACTTATGTCACCATGCACTATCTCCGTACTCATTGCGTTGATTGTCATATCTATCGTAGTTCTAACGCGAACATGATGACCATCGCCCTTGCATTAGGGCTACATGATCATCCCTAACACAACATAATACAGTATTGTGTTCTGGGGTAAGCAGTAGGTTAGATTTCATATGCGATGGTCATCAATCCTAATGTGGCCGGTGAAAGGGTCATCCATACGAAAAAAAAAAAAAAAAAAACTTTGGTTGTGGGCTGTTGCTGATTGGATGTTTATCAGTTGGACCATTTACCGTGTTGTTTTTTCCTTGGGAGTGATATTGGGTTATTTGTGTTTGTTCCCCTCTTGCTAAGTTTACGTGTTGAAATTTTTGGGACTTTATAGTTAATGAAATTTGTTCCCCAAAGAAGTCTTTTAAAGGACAGCAATGTTTTCTTTCTTTGTCAAATGATAATTTTGTTTATCAATCTTTGAAAGAATGAAAATGCTTTTATGGCAATACTTGCGAGCCTGGTTCCATTTATGATGGTCGATCTTTTCTGTGCAGCAGTTTTGTTAATTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGGTAGTAGAACTTATACAGTCATCTTTTGATTCATTCTGTACCTTCCGTGTTTTTTCCATTGCATCTGCGATGTATGGAAGAATTTTTAGATTTTCCGGATAGATTAGTTTCGTAGCCTCTTAAAAAAAAATAAAAGTAACTTCTGATACAAAGCCTTTTCTCTTTCTGTTATTTTTTTTTTACTCTGAACGTTCCCTTTTACTGATGATTGCCAATGTGTGCTTCTTAGGCCAAGTTTTGCACATAGTTGATCTCACTTTTGCCATGTGCTTGTCTGGCTAAGTTTAGTTATGGTGTATGGAAATCCAACACTTAAATTAGCCAAATCTTTGTTTCCTATTGTACTTAATGGAAAAGAAATTTGGCAGTAATATCAGGAGGTAGAGAGAGATTTGGAAATAGATCAAATTGTGCAGTATGGTTTTGTTCTAATTTGAGGCTTGGTTTAAATGCCTATAATATGGCCTCTTACATTGCATCCAGATGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGGTAAAATGATATTAAAATCATTGGCACATGGATTTCAAAAGAGCACTCCGTTTCTTATGTTTTATGAGTTGATGTTTTTTCAATAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATGTATGGTGTTCTAATCCCTCTTACTAAAAGTTTCATGTAGGATTTTCTTATGAGTAAGTAAATTGCTGTACAACATCATAATAAATTGAGATTTCTACTAATGTAATGAGCAGGTAGTCCGGGATAAATTATTGAATGATGCAAGTACAATATAGTTACCTAGTTTGTGCTTTACATGTTTTTCTCATTTATAAACCTTTGATTAACATTGATCTCTTATTTTTTTGAGTCAATAGTGACATGCTAAGCTCCCTTTTCTTTTCCCCATCTTTCCAATAATAATCAGTCTACATTTGCATTTGTTCTTCATATCAAATTTGTTGCATCTAGAAGGGTGTCTTTTGATTCTAGCATACTGATTCTCAAGGTTGTTAAATCATGAAATGTAACACGCATCAAAATGGAATTTTAGTTTATTGTGTATTAATTTCTAAAAAAACAGAAGTCAGAAAACAAATGGATTCTAAACAGTCCCTAAATGATTCTGTTTTCTTTCTTTTTTGGCAGCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATATCCTTCATACGTTATGGTTATGCTTTTCAGTTTCATTTGTGTTTTAAACTCATTAGCATATTAGTTGATGAAACAAATGTGTCATCCCCACCTCAAGCCACATCGTAAAGATTGTTTAAAGCCCAGTAAATATAATGGATTGAGAATTATTTTAATTGGCCCTCACATGAAATTCTTTGATTGAAAAATTGAAAAAACATACGGGAAACAGGAAATGACAATTTTCTAACACAAAGGGCCTTTTTGCTTGTCATATTCTGACATATGTTATATGTTCTTATGCTGCAACGTAACTTTAGAAGTTCCTTGACTGAGCGTTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTGATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCTAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCGTTCAATTGATTGAATATTATCATCATCTACTTCTAAATGTTTGTCTCCCTAATGATGGAGGTTGTATCAGCCTGTTTGTATATGAAAGGAAATGGTAACTGTTGTCTGTATCATCCCTTCTCTTGCATCTAGAAACAAAACACAGGATGATTTCTTTGGTGTATTTTAACATCTTTCATTTCTATAACAAGATATCTTCTTGAATTTCTGGGGAAGAGATGACCATTTATTTAGCATAATGCAAATGAAGATTACATGGCTAAGACTTTCCTAACCAGACAGGTTGAATAAATAAAAAAAATTGCATTTGCATACAAATTTAGACTACATGGGAAGTAAGTATCGAAACTCGGAATCATAAGGTTGGATTTCCACCATTTTATTAACAGGGGATTTAGTTTCACCATTCAAACACTCCATTATAGACCTCTTCAAGGTTGCAGAACGAGGAAGTTGGCTATAAATCCATTCCAACAGTGATTCCATGTCGTCTGCAAAGTCTTTCATGTGCCATTGAAGAAGCTTTGGCACCATTATCTTCTTCTTGCTTGTCATCCCTACTGATGCTTCCAAGTACTCCACTTTTGCCAACCCCAACTCATTCACCACGTCCTCTGCAGTGTACACCCTTAACTTCACAAAGTTTCAACAATTCGTTTCTGTCAATTTTCTTTCAAAGGTTCTTCAGAGGCATAATATATGTAGCAGAAGACACTTACTGCAGGTGATGACCAACTGCCTCGACACAATGCGAATGTCACATTTGGTTCTGGATATCCTAAGCCATAAGCATGTCGAAGCAGCATTTCTTTCTCATCCAAAGGCTTCAAAGAGAACTCGTTCAATTAATTATCTCCTTGTGTACTGAAAGTGATAGTACTTGTTTTGAAGTATACAGTTTGCTATACAAGATAATCACTTACATATTTTGTTTCTGCTTCGCTTGGATGACGAAGAATGAAATGTTCAATAGCCAGAGCATTGAGAACTATCCCACCAACATTAAGAGCAGCCTGCAGGCCAGAAGAATAGTATATGCCTCAGAGAAGCTCGATGATAATGGTTAGATCTTGATCTATTTCTTTTTGTATTACAAGTTAGGAGATCGGCATATACCTTGTTCATCAAAGCCAAGAGTTTTTCAATTGTTGATGGCTGTCCATGTTCGAGAAATGCCTGAAATTTTCATGATTAATGTCAGCATATTGGAATAGGAGCATGTCTATTATTCATCAGTGTCTTACATGTCTTACAGTACATGCATTATAGAGGAGTTATATATGTTTATCCAAAATGCTAACTTCTGTTTGTATGTCAAGAAGGTCAAGTCCACACTCCTCAGCTTATGAATCAAAACCCTGCACAGAAGGGAAACACAACAACATTTTCAACTTTTCAGCTTAACTTTTGGCAATCATCAGGTTAAACAGACTTCTAGTTACCTCAATTTTCTGATTGACGGCGAGCACTCAGGCAATCTACGGATGTCGAAAGACGTTCGTGTTATATGGATGAAGTTCTTATAAGGGCCAATATCCCTCACAGTTCCTTCTGAGTCGAGCAATATACTATAAGGATTGGGATTGGGATTGGGATTGGATGAGCTATAATCAAAAGACAAGGTGAGTTGAGGCGCTTTGCAACTAAAGCTTGTCTTTGCAATGGAGCGCTTTGAGTTGATACATGAAAGGCCATGTTTTGGTATATTTGGTGAAGTTTGGCTGTTGTTTGATGGCTGATTAAGATCAAGATAAATGCTTATGAGACACTTAATCAACTGTTCTGAAATCTCATTTGGTGTTTCAATGCAAGGTCCTTTGTCGAATTGACTTTGGTTTCGGCTTCTTGTCATATTCTTCCTAGCACCTACATTGCATAGTCTTAAACATTGAAAATTGAAAACAAGAAGAAGCAAATGCAGCAAAATGGGAAGATGGATTACCAGTAGAAGACATGGTAATTTGGATATCAGAAGCAGCACTTGAAGAGAATCTCCTTTCACTAAGCATTATATCTTTTCTAAGTTCATCATAATGCTGAGATCTTGATCTTTGGCCATTAATCTGTGAGTTGCTATTATTTTCAG

mRNA sequence

ATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGATGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTGATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCTAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCGTTCAATTGATTGA

Coding sequence (CDS)

ATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGATGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTGATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCTAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCGTTCAATTGATTGA

Protein sequence

MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVMETETNVGEPERSDSDDSDRSID*
Homology
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BLAST of CsaV3_5G026740 vs. NCBI nr
Match: XP_004142764.1 (transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655371.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655372.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655373.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >KAE8648545.1 hypothetical protein Csa_008553 [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 4.9e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TETNVGEPERSDSDDSDRSID
Sbjct: 181 TETNVGEPERSDSDDSDRSID 201

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BLAST of CsaV3_5G026740 vs. NCBI nr
Match: XP_008458871.1 (PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_008458872.1 PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 3.0e-102
Identity = 196/201 (97.51%), Postives = 198/201 (98.51%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+DASLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENP HTNAKPASAPAPKPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPHHTNAKPASAPAPKPDVME 180

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TETNVGEPERSDSDDSD SID
Sbjct: 181 TETNVGEPERSDSDDSDHSID 201

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BLAST of CsaV3_5G026740 vs. NCBI nr
Match: XP_038891097.1 (transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_038891098.1 transcription initiation factor TFIID subunit 7 [Benincasa hispida])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 188/201 (93.53%), Postives = 193/201 (96.02%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNE+ASSS+DASLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNESASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIK ADIGQMIMVREP D APDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKTADIGQMIMVREPGDAAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENP H +AKPAS PA KPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPHHASAKPASVPAAKPDVME 180

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TETNVGEPERSDSDDSD S+D
Sbjct: 181 TETNVGEPERSDSDDSDHSVD 201

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BLAST of CsaV3_5G026740 vs. NCBI nr
Match: XP_023516679.1 (transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516685.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516692.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516700.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.4 bits (921), Expect = 2.1e-95
Identity = 186/201 (92.54%), Postives = 189/201 (94.03%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAE QDDR EN  H +AKPAS PA KPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TET VGEPERSDSDDSD SID
Sbjct: 181 TETTVGEPERSDSDDSDHSID 201

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BLAST of CsaV3_5G026740 vs. NCBI nr
Match: XP_022990129.1 (transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >XP_022990130.1 transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima])

HSP 1 Score: 358.2 bits (918), Expect = 4.6e-95
Identity = 185/201 (92.04%), Postives = 189/201 (94.03%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAE QDD+ EN  H +AKPAS PA KPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDKHENSHHASAKPASTPAAKPDVME 180

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TET VGEPERSDSDDSD SID
Sbjct: 181 TETTVGEPERSDSDDSDHSID 201

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BLAST of CsaV3_5G026740 vs. ExPASy Swiss-Prot
Match: B9DG24 (Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.6e-61
Identity = 114/145 (78.62%), Postives = 133/145 (91.72%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+SD+  LDL FS+DGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREP DPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

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BLAST of CsaV3_5G026740 vs. ExPASy Swiss-Prot
Match: Q9D3R9 (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN=Taf7l PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 47/155 (30.32%), Postives = 80/155 (51.61%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           +EEQF+LR+PP  A  + ++++   ++  D  L + FS DG      + +   PA L++L
Sbjct: 106 VEEQFILRLPPEQAYAVRKIIHSRNAAWKD-KLKIDFSPDGHHAVVQVDNVSLPAKLVNL 165

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVR---EPSDPAPDST------------------- 120
           PCV+ S KT D     K AD+ QM++     EP  P  +                     
Sbjct: 166 PCVIGSLKTIDRKTFYKTADVSQMLVCSPEGEPHSPPEEPVVSTGPTVIGISEGKAERKK 225

Query: 121 -EYRHGLTPPMRDARKRRFRREPDLNPELVRRVEK 133
             ++HG+TPP+++ RK+RFR+     P+ V++V++
Sbjct: 226 YNWKHGITPPLKNVRKKRFRKTTKKLPD-VKQVDE 258

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BLAST of CsaV3_5G026740 vs. ExPASy Swiss-Prot
Match: Q6R1L1 (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 54/163 (33.13%), Postives = 78/163 (47.85%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     +  D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIM----------VREPSDPA-PDSTE---------- 120
           PCV+ES KT D     K ADI QM++          V EP  PA P +++          
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVAPADPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]
BLAST of CsaV3_5G026740 vs. ExPASy Swiss-Prot
Match: Q9R1C0 (Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 51/163 (31.29%), Postives = 71/163 (43.56%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     +  D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYAATVRRAVQSGHVNLKD-KLSIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTE--------------------- 120
           PCV ES KT D     K ADI QM++     D  P   E                     
Sbjct: 72  PCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPVEEAAATADPKANKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

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BLAST of CsaV3_5G026740 vs. ExPASy Swiss-Prot
Match: Q15545 (Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.6e-12
Identity = 52/163 (31.90%), Postives = 76/163 (46.63%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     +  D  L +    DGR G   +      + L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLASKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIM----------VREP---SDPAPDSTE-------- 120
           PCV+ES KT D     K ADI QM++          V EP   +DP     +        
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 IWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]
BLAST of CsaV3_5G026740 vs. ExPASy TrEMBL
Match: A0A0A0KSB3 (TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL
Sbjct: 96  MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 155

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 156 PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 215

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME
Sbjct: 216 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 275

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TETNVGEPERSDSDDSDRSID
Sbjct: 276 TETNVGEPERSDSDDSDRSID 296

[Close]
BLAST of CsaV3_5G026740 vs. ExPASy TrEMBL
Match: A0A1S3C8V9 (transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC103498146 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 196/201 (97.51%), Postives = 198/201 (98.51%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+DASLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENP HTNAKPASAPAPKPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPHHTNAKPASAPAPKPDVME 180

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TETNVGEPERSDSDDSD SID
Sbjct: 181 TETNVGEPERSDSDDSDHSID 201

[Close]
BLAST of CsaV3_5G026740 vs. ExPASy TrEMBL
Match: A0A6J1JR83 (transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 185/201 (92.04%), Postives = 189/201 (94.03%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAE QDD+ EN  H +AKPAS PA KPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDKHENSHHASAKPASTPAAKPDVME 180

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TET VGEPERSDSDDSD SID
Sbjct: 181 TETTVGEPERSDSDDSDHSID 201

[Close]
BLAST of CsaV3_5G026740 vs. ExPASy TrEMBL
Match: A0A6J1H9I8 (transcription initiation factor TFIID subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111461346 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 185/201 (92.04%), Postives = 189/201 (94.03%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVR+P DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAE QDDR EN  H +AKPAS PA KPDVME
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDRHENSHHASAKPASTPAAKPDVME 180

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TET VGEPERSDSDDSD SID
Sbjct: 181 TETTVGEPERSDSDDSDHSID 201

[Close]
BLAST of CsaV3_5G026740 vs. ExPASy TrEMBL
Match: A0A6J1JHS5 (transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.2e-95
Identity = 185/201 (92.04%), Postives = 189/201 (94.03%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 85  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 144

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 145 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 204

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDDRDENPDHTNAKPASAPAPKPDVME 180
           DLNPELVRRVEKDLLNIMAGGTTENADVGVAE QDD+ EN  H +AKPAS PA KPDVME
Sbjct: 205 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEHQDDKHENSHHASAKPASTPAAKPDVME 264

Query: 181 TETNVGEPERSDSDDSDRSID 202
           TET VGEPERSDSDDSD SID
Sbjct: 265 TETTVGEPERSDSDDSDHSID 285

[Close]
BLAST of CsaV3_5G026740 vs. TAIR 10
Match: AT1G55300.1 (TBP-associated factor 7 )

HSP 1 Score: 251.1 bits (640), Expect = 7.4e-67
Identity = 138/207 (66.67%), Postives = 169/207 (81.64%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+SD+  LDL FS+DGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREP DPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADVGVAEQQDD-RDENPDHTNAKPASA---PAPKP 180
           DLNPELV+RVE+DLLNI++GGT EN    V EQ++   +EN  + + K +S+   P  KP
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN----VHEQEEPATNENASNASKKVSSSSPTPVEKP 180

Query: 181 DVMETETN--VG-EPERSDSDDSDRSI 201
           +  ET T+   G EPERS+S+DSD S+
Sbjct: 181 EAPETGTSNPTGVEPERSESEDSDDSM 203

[Close]
BLAST of CsaV3_5G026740 vs. TAIR 10
Match: AT1G55300.2 (TBP-associated factor 7 )

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-62
Identity = 114/145 (78.62%), Postives = 133/145 (91.72%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+SD+  LDL FS+DGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREP DPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

The following BLAST results are available for this feature:
BLAST of CsaV3_5G026740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142764.14.9e-105100.00transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655371.... [more]
XP_008458871.13.0e-10297.51PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_00... [more]
XP_038891097.11.3e-9793.53transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_03889109... [more]
XP_023516679.12.1e-9592.54transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022990129.14.6e-9592.04transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >X... [more]
BLAST of CsaV3_5G026740 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B9DG242.6e-6178.62Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9D3R91.2e-1330.32Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN... [more]
Q6R1L11.0e-1233.13Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 G... [more]
Q9R1C01.7e-1231.29Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7... [more]
Q155456.6e-1231.90Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 ... [more]
BLAST of CsaV3_5G026740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSB32.4e-105100.00TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 P... [more]
A0A1S3C8V91.4e-10297.51transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1JR832.2e-9592.04transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima O... [more]
A0A6J1H9I82.2e-9592.04transcription initiation factor TFIID subunit 7 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JHS52.2e-9592.04transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima O... [more]
BLAST of CsaV3_5G026740 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G55300.17.4e-6766.67TBP-associated factor 7 [more]
AT1G55300.21.9e-6278.62TBP-associated factor 7 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006751TAFII55 protein, conserved regionSMARTSM01370TAFII55_N_2coord: 1..145
e-value: 1.5E-59
score: 213.9
IPR006751TAFII55 protein, conserved regionPFAMPF04658TAFII55_Ncoord: 1..135
e-value: 1.9E-32
score: 112.2
IPR006751TAFII55 protein, conserved regionCDDcd08047TAF7coord: 2..147
e-value: 9.97718E-43
score: 139.326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..201
IPR037817Transcription initiation factor TFIID subunit 7PANTHERPTHR12228TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATEDcoord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G026740.1CsaV3_5G026740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
cellular_component GO:0005669 transcription factor TFIID complex