CsaV3_5G026570 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G026570
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	CASP-like protein
Location	chr5: 21714076 .. 21715343 (+)
RNA-Seq Expression	CsaV3_5G026570
Synteny	CsaV3_5G026570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAAAGCTCAACAGAAAAAAAAAGAAAGTTGAGATTGAGAAATAAAAGATATTAAATTCATTAGAAAAAAATGGAAGCAAAAATGGGTACAAAAATTGCTTCTTTTGTGCTGAGAGTTCTTATTTTTGCTTTTCTTTTAATTTCCATCATAGTTTTGGGTACCAATTCCAAAACTGTTGGAAATAGTGAATCTCATTTCCATAATGTCAATTCCTATAGGTAATTTATTTTTTCTACTTTTACTTATTTATGTGTATCGAGTTTCATGATTTATTTATTTATGAAAATTTAAAATTTCTATATATAGGTTTGCAATGGCAACCATCATAGTTGGAGGTGCATTCAATCTCTTGCAAATTGCCTTATCCCTTTATCGTCTTATAACCAAGACCGATGGCAGTATTTTATTCGACTTCTATGGTGATAAGGTATTATATATCTTTTAAACATATGTTTTAATTTCTTTTTTCTTTTAGAACCAGAAAACAAGTTTGGATGCATATTAAAATTAAAACCTTATTTATAGACTAATAAATAACCTAATATTAAGTACATATTTTAAGAAATTGAAATTAGAACACTCGACTCCCTTCTAATTTTTGACAGAAAATCTCCATCTTGTTCCTGTAAAATTAAATGAAAAACGTCCCAAGAGAATAGAGAATGAAAGGGGAGAAAGAGAGGCCTTCACCTCCATAGGCATCTGACTTAAAAGTTAAGCTTTTCCATAAACCAAACTTATTAAAATTGAAAAAATATATGTTTATATGAATGGTATTTAATAATGGTACAAAATGGAAAGTCTTAGTTATTATTGAAGAAGATGAATTGTTATTTATTGTTAGATATTGTCCTACGTTTTGTTGGCGGGAGCAGCGGCGGCGTTGGGTTCAAGCATAGATTTGAAGGCGAATATGAGCGAATGGAGCTCGTTTTTTGACCAAGGCAATGCAGCTGCTGCGCTTCTTCTTCTTGCATTTTTATGTAGTGCTATCATTTCTGTACTTTCTTCTTTAGCTCTTTCTAACAAACCTAATTAGTTTTCTTTTCTCTCTTCTTTCTCTTAGGAAATTTATACAACAATCTTTGTTCTCTTTTTTTACGAAATTATTTGATTGTGTCATGTAATGTAGAATAGTAATTAGGAGTTTGGAGTTTGGAATTTTGTATCATGTAATTTTATGCTTTTGGTTAGTGGTAGACTCTTTTTGTTTAACTCTCTTGCTCTTTATTTTGTTAATGAATTATTCATCAACTTAAAACTTT

mRNA sequence

ATGGAAGCAAAAATGGGTACAAAAATTGCTTCTTTTGTGCTGAGAGTTCTTATTTTTGCTTTTCTTTTAATTTCCATCATAGTTTTGGGTACCAATTCCAAAACTGTTGGAAATAGTGAATCTCATTTCCATAATGTCAATTCCTATAGGTTTGCAATGGCAACCATCATAGTTGGAGGTGCATTCAATCTCTTGCAAATTGCCTTATCCCTTTATCGTCTTATAACCAAGACCGATGGCAGTATTTTATTCGACTTCTATGGTGATAAGATATTGTCCTACGTTTTGTTGGCGGGAGCAGCGGCGGCGTTGGGTTCAAGCATAGATTTGAAGGCGAATATGAGCGAATGGAGCTCGTTTTTTGACCAAGGCAATGCAGCTGCTGCGCTTCTTCTTCTTGCATTTTTATGTAGTGCTATCATTTCTGTACTTTCTTCTTTAGCTCTTTCTAACAAACCTAATTAG

Coding sequence (CDS)

ATGGAAGCAAAAATGGGTACAAAAATTGCTTCTTTTGTGCTGAGAGTTCTTATTTTTGCTTTTCTTTTAATTTCCATCATAGTTTTGGGTACCAATTCCAAAACTGTTGGAAATAGTGAATCTCATTTCCATAATGTCAATTCCTATAGGTTTGCAATGGCAACCATCATAGTTGGAGGTGCATTCAATCTCTTGCAAATTGCCTTATCCCTTTATCGTCTTATAACCAAGACCGATGGCAGTATTTTATTCGACTTCTATGGTGATAAGATATTGTCCTACGTTTTGTTGGCGGGAGCAGCGGCGGCGTTGGGTTCAAGCATAGATTTGAAGGCGAATATGAGCGAATGGAGCTCGTTTTTTGACCAAGGCAATGCAGCTGCTGCGCTTCTTCTTCTTGCATTTTTATGTAGTGCTATCATTTCTGTACTTTCTTCTTTAGCTCTTTCTAACAAACCTAATTAG

Protein sequence

MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGGAFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN*

Homology

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BLAST of CsaV3_5G026570 vs. NCBI nr
Match: XP_031741109.1 (CASP-like protein 4D1 isoform X1 [Cucumis sativus] >KAE8648540.1 hypothetical protein Csa_007999 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60
           MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG
Sbjct: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60

Query: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120
           AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF
Sbjct: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 155
           FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 154

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BLAST of CsaV3_5G026570 vs. NCBI nr
Match: XP_008458887.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 136/154 (88.31%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60
           MEAKM TKIASFVLRVL F FLL+SIIVLGTNSKT+GN E HFHNVNSYR+AMATII+GG
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGG 60

Query: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120
           AFNLLQIAL+LYRL+TKTDGSILFDFYGDK+LSY LLAGAAAALGSS+DLKANM   +SF
Sbjct: 61  AFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 155
           FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 154

[Close]

BLAST of CsaV3_5G026570 vs. NCBI nr
Match: XP_022992769.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60
           MEAKMGTKIASFVLRVL F FLLISIIVLGT SKTVG+ +  FHNVNSYRFAMATII+GG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120
           AFNLLQIAL+LYRLITKTDG +LFDF+GDK+LSY LLAGAAAALGS+IDLKAN+   +SF
Sbjct: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 154
           FDQGNAAAALLLLAFLCSA++SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 153

[Close]

BLAST of CsaV3_5G026570 vs. NCBI nr
Match: XP_022939465.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 238.8 bits (608), Expect = 3.1e-59
Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60
           MEAKMGTKIASFVLRVL F FLLISIIVLGT SKTVG+ +  FHNVNSYRFAMATII+GG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120
           AFNLLQIAL+LYRLITK+DG +LFDF+GDK+LSY LLAGAAAALGS+IDLKAN+   +SF
Sbjct: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 154
           FDQGNAAAALLLLAFLCSAI+SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP 153

[Close]

BLAST of CsaV3_5G026570 vs. NCBI nr
Match: XP_023551429.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.0 bits (606), Expect = 5.3e-59
Identity = 127/153 (83.01%), Postives = 140/153 (91.50%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60
           ME KMGTKIASFVLRVL F FLLISIIVLGT SKTVG+ +  FHNVNSYRFAMATII+GG
Sbjct: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120
           AFNLLQIAL+LYRLITKTDG +LFDF+GDK+LSY LLAGAAAALGS+IDLKAN+   +SF
Sbjct: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 154
           FDQGNAAAALLLLAFLCSA++SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 153

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BLAST of CsaV3_5G026570 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25
Identity = 63/157 (40.13%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 5   MGTKIASFVLRVLIFAFLLISIIVLGTNSKTVG----NSESHFHNVNSYRFAMATIIVGG 64
           + +++A+ +LR+L F FL+ S+++L TN+ T+       + HF +V +YR+ +ATI++G 
Sbjct: 8   LASRMAALILRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGL 67

Query: 65  AFNLLQIALSLYRLIT-----KTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLK---A 124
           A+ +LQIA +LY + T       DG++ FDF+GDK++SY+L+ GAAA   S+ D+K   +
Sbjct: 68  AYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFS 127

Query: 125 NMSEWSSFFDQGNAAAALLLLAFLCSAIISVLSSLAL 150
              ++ +F ++G A+A+LLL+ F+C+A++SV SS AL
Sbjct: 128 GSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

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BLAST of CsaV3_5G026570 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 64/154 (41.56%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 6   GTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNS--ESHFHNVNSYRFAMATIIVGGAFN 65
           G++    +LRVL F FLLI++I++    +T   +  E  F+++ +YR+ ++TII+G A+N
Sbjct: 16  GSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGFAYN 75

Query: 66  LLQIALSLYRLIT-----KTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWS 125
           LLQ+ALS++ +++       DG  LFDF+GDKI+SY+L++G+AA  G +++L   +   +
Sbjct: 76  LLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVPS-N 135

Query: 126 SFFDQGNAAAALLLLAFLCSAIISVLSSLALSNK 153
           SF D+ NA+A+LLL+AFL +A+ S  +S AL  K
Sbjct: 136 SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CsaV3_5G026570 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 67/160 (41.88%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 5   MGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHF----HNVNSYRFAMATIIVGG 64
           M +++ +  LRVL FAFL++S++++ TN+ T+      F     +  SYR+ +A I  G 
Sbjct: 17  MVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGIDEFKVRSKDFYSYRYMLAAIAFGL 76

Query: 65  AFNLLQIALSLYRLI------TKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANM 124
            + +LQIAL+L  +       T  DG+++FDFYGDK++SY+L  GAAAA G++ +LK  +
Sbjct: 77  TYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQL 136

Query: 125 S--EWSSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNK 153
           +      FF++G A+A+LLLL F+C+AI+SV SS AL  K
Sbjct: 137 AGLGGDKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of CsaV3_5G026570 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 63/152 (41.45%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 11  SFVLRVLIFAFLLISIIVLGTNSKTV----GNSESHFHNVNSYRFAMATIIVGGAFNLLQ 70
           S ++R+L    LLIS IV+ TN++TV    G+ +  F +  +YR+ +AT+I+G A+ LLQ
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLLQ 73

Query: 71  IALSLYRLITKT----DGSILFDFYGDKILSYVLLAGAAAALGSSIDLK--ANMSEWSSF 130
           IA S+  L T      +G +LFDFYGDK +SY L+ GAAA+ G + DLK       +S F
Sbjct: 74  IAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLKQLEGSDNYSKF 133

Query: 131 FDQGNAAAALLLLAFLCSAIISVLSSLALSNK 153
            +  NAAA+L L+ F  +   S+ SS  L  +
Sbjct: 134 LNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

[Close]

BLAST of CsaV3_5G026570 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-18
Identity = 63/156 (40.38%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 13  VLRVLIFAFLLISIIVLGTNSKTVGNSESH----FHNVNSYRFAMATIIVGGAFNLLQIA 72
           +LRVL  AFLLI+++++ TN+ T+  S +     F++V +YR+ ++  ++G  + ++Q+ 
Sbjct: 19  LLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLF 78

Query: 73  LSLYRLIT-KTDG-SILFDFYGDKILSYVLLAGAAAALGSSIDLKAN---MSEWSS---- 132
           L++ +  T KT   +  FDFYGDK++SY+L  G+AA  G S DLK     + E+ S    
Sbjct: 79  LTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDPV 138

Query: 133 --FFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 154
             FF +G A+A+LLL AF+  A++SV SSLALS +P
Sbjct: 139 DKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CsaV3_5G026570 vs. ExPASy TrEMBL
Match: A0A1S3C911 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.3e-65
Identity = 136/154 (88.31%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60
           MEAKM TKIASFVLRVL F FLL+SIIVLGTNSKT+GN E HFHNVNSYR+AMATII+GG
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGG 60

Query: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120
           AFNLLQIAL+LYRL+TKTDGSILFDFYGDK+LSY LLAGAAAALGSS+DLKANM   +SF
Sbjct: 61  AFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 155
           FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 154

[Close]

BLAST of CsaV3_5G026570 vs. ExPASy TrEMBL
Match: A0A6J1JYE7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.8e-60
Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60
           MEAKMGTKIASFVLRVL F FLLISIIVLGT SKTVG+ +  FHNVNSYRFAMATII+GG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120
           AFNLLQIAL+LYRLITKTDG +LFDF+GDK+LSY LLAGAAAALGS+IDLKAN+   +SF
Sbjct: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 154
           FDQGNAAAALLLLAFLCSA++SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 153

[Close]

BLAST of CsaV3_5G026570 vs. ExPASy TrEMBL
Match: A0A6J1FMS6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60
           MEAKMGTKIASFVLRVL F FLLISIIVLGT SKTVG+ +  FHNVNSYRFAMATII+GG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120
           AFNLLQIAL+LYRLITK+DG +LFDF+GDK+LSY LLAGAAAALGS+IDLKAN+   +SF
Sbjct: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 154
           FDQGNAAAALLLLAFLCSAI+SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAIVSVLSSFALSHKP 153

[Close]

BLAST of CsaV3_5G026570 vs. ExPASy TrEMBL
Match: A0A6J1BZ60 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.9e-48
Identity = 112/150 (74.67%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 5   MGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGGAFNL 64
           MG+KIAS VLRV+ F FL ISIIVL TNS+  GN   HFHNVNSYRFAMATII+GGAFNL
Sbjct: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQ--GN--IHFHNVNSYRFAMATIIIGGAFNL 66

Query: 65  LQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSFFDQG 124
           LQIALSLY +I+K+ G++LF FYGDK+LSYVLL+GAAA LG  IDL AN+    SFF +G
Sbjct: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126

Query: 125 NAAAALLLLAFLCSAIISVLSSLALSNKPN 155
           NAAAALLL+AFLCSA IS+LSSLALSNKPN
Sbjct: 127 NAAAALLLIAFLCSAAISILSSLALSNKPN 152

[Close]

BLAST of CsaV3_5G026570 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.9e-34
Identity = 80/163 (49.08%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTV-----GNSESHFHNVNSYRFAMAT 60
           M A  G++IAS +LR+L F  + IS++++ TNSKTV       ++  F +V SYR+  A 
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  IIVGGAFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMS 120
            ++G A +LLQIAL+LY ++TK+DG+  FD + DK+L+Y+LL+GA+A LG+ IDL++N  
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 E-----WSSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 154
           +     ++SFFD+G+A+AA+LLLAF+CSA++S+LSSLAL  KP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of CsaV3_5G026570 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19
Identity = 63/156 (40.38%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 13  VLRVLIFAFLLISIIVLGTNSKTVGNSESH----FHNVNSYRFAMATIIVGGAFNLLQIA 72
           +LRVL  AFLLI+++++ TN+ T+  S +     F++V +YR+ ++  ++G  + ++Q+ 
Sbjct: 19  LLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLF 78

Query: 73  LSLYRLIT-KTDG-SILFDFYGDKILSYVLLAGAAAALGSSIDLKAN---MSEWSS---- 132
           L++ +  T KT   +  FDFYGDK++SY+L  G+AA  G S DLK     + E+ S    
Sbjct: 79  LTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDPV 138

Query: 133 --FFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 154
             FF +G A+A+LLL AF+  A++SV SSLALS +P
Sbjct: 139 DKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CsaV3_5G026570 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-18
Identity = 56/160 (35.00%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 8   KIASFVLRVLIFAFLLISIIVLGTNSKTVGNSES----HFHNVNSYRFAMATIIVGGAFN 67
           K+   +LRVL   FL+I++I+L TNS T+ +  S    HF +V +YR+ ++  ++G  + 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQIALSLYRLIT--KTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLK---------A 127
           ++Q+  ++    T  K   +   DFYGDK++SY++  G+AA  G + DLK          
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVALD 133

Query: 128 NMSEWSSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNK 153
           +      FF +G A+A+LLL AF+C A++SV SS A++ +
Sbjct: 134 STDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CsaV3_5G026570 vs. TAIR 10
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-05
Identity = 42/155 (27.10%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 13  VLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMA------TIIVGGAFNLLQ 72
           +LR+ I  FLL++  ++G +S+T     ++ H   S+R+ +A        +V  A+NL+Q
Sbjct: 10  ILRLCIVFFLLLTSCLIGLDSQT--KEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLVQ 69

Query: 73  IALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSE--WSSF---- 132
           + L  Y +  KT     F +  D+  +YV+ AG +AA   S+ +     E  W  +    
Sbjct: 70  LGLGWYNVEQKTSNPKWFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRELQWMKWCYKF 129

Query: 133 ----FDQGNAAAALLLLAFLCSAIISVLSSLALSN 152
               F  G+A    ++L ++ +A++ +LSS++  N
Sbjct: 130 TRFCFQMGSA----IILNYIAAALMVLLSSISAFN 158

[Close]

BLAST of CsaV3_5G026570 vs. TAIR 10
Match: AT2G38480.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 42.0 bits (97), Expect = 5.2e-04
Identity = 39/144 (27.08%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 8   KIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGGAFNLLQ- 67
           K AS + R +   F LI+ +++ +N    G    +F++   YR+ +A  I+   +   Q 
Sbjct: 45  KKASPITRGICLLFSLIAFLIMVSNKHGYGR---NFNDYEEYRYVLAISIISTLYTAWQT 104

Query: 68  IALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSFFDQGNA 127
            A    R I     SIL DF GD+I++Y+L++ A++A+  +   +      + F D   +
Sbjct: 105 FAHFSKREIFDRRTSILVDFSGDQIVAYLLISAASSAIPLTNIFREGQD--NIFTDSAAS 164

Query: 128 AAALLLLAFLCSAIISVLSSLALS 151
           A ++ + AF+  A+ ++ S   LS
Sbjct: 165 AISMAIFAFIALALSALFSGYKLS 183

The following BLAST results are available for this feature:

BLAST of CsaV3_5G026570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741109.1	1.1e-72	100.00	CASP-like protein 4D1 isoform X1 [Cucumis sativus] >KAE8648540.1 hypothetical pr...	[more]
XP_008458887.1	1.1e-64	88.31	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]
XP_022992769.1	1.4e-59	83.66	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_022939465.1	3.1e-59	83.66	CASP-like protein 4D1 [Cucurbita moschata]	[more]
XP_023551429.1	5.3e-59	83.01	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G026570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	3.1e-25	40.13	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	9.8e-24	41.56	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9NBE5	9.8e-24	41.88	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
A1XGB4	1.1e-19	41.45	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
Q8GWD5	3.6e-18	40.38	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]

BLAST of CsaV3_5G026570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C911	5.3e-65	88.31	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1	[more]
A0A6J1JYE7	6.8e-60	83.66	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1	[more]
A0A6J1FMS6	1.5e-59	83.66	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1	[more]
A0A6J1BZ60	5.9e-48	74.67	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1	[more]
A0A6J1C1A4	4.9e-34	49.08	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]

BLAST of CsaV3_5G026570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	2.6e-19	40.38	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	2.2e-18	35.00	Uncharacterised protein family (UPF0497)	[more]
AT4G25830.1	2.1e-05	27.10	Uncharacterised protein family (UPF0497)	[more]
AT2G38480.1	5.2e-04	27.08	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..137 e-value: 7.4E-21 score: 74.5
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 7..152
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 7..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G026570.1	CsaV3_5G026570.1	mRNA