CsaV3_5G026540 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G026540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	CASP-like protein
Location	chr5: 21699426 .. 21700226 (+)
RNA-Seq Expression	CsaV3_5G026540
Synteny	CsaV3_5G026540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATTCAAGTGGTTCAAGGATAACTTCTCTTATATTGAGAATACTAACATTTGTTTTTCTTTTCATCTCCTTCTTCATTCTTATCACCACTTCTCAAACTGTTCGACCATATAAGCTTCATTTCAATGATTATCATGGTTTTAGGTATGTCTCTTACCTCTCATTGATTGAGAATATACATGTTAAACAGATGAGTTATATAATTAGAGTTGACATTTTTCTACAGGTATATGCTTGCTACGATCATCATTGGACTTGTATTTAACCTTCTGCAAATCGCATTCTCCCTCTTTAACATAGTTAAGAATGGAGACGGTACTATATTATTCGATTTCTTTGGCGACAAGGTACGTACGTACGTTTGGTAATTTCGATTTGCTGTCTTGTAATAGTTAGAAGAATGGTAGAAAAGTAAATTGACGAAAAAGATAATATTGGGGTTTCTTTGGTGCAGTTTTTGTCATACCTTCTAGCAACAGGAGCAGCAGCTGGATTTGGAGTTGGAGTTGATTTGAAAAAAGTAGATCCAGATGATTTGTTCAGAATATTCTTTGATAAGGCCTATGCAGCTTCAACTCTTCTTTTGTTTGCTTTCTTTTGCTCTGCAGCTGTCTCCATTCTCTCTTCATTTGCACTTTCCAAGAGATCTTAATATTAAGTTAATTGTTACTCTTTGGGTTTTTTTTTCATAGTTTAGTTTGTATGTGTGTATTCTGAAGATTCTTTTTCCATTTTTTGTTACTTCTTCTCTTAGGTTCTACCGATTGAAAATGTTGAGATTTTCTTTTTCTTATTG

mRNA sequence

ATGGAAAATTCAAGTGGTTCAAGGATAACTTCTCTTATATTGAGAATACTAACATTTGTTTTTCTTTTCATCTCCTTCTTCATTCTTATCACCACTTCTCAAACTGTTCGACCATATAAGCTTCATTTCAATGATTATCATGGTTTTAGGTATATGCTTGCTACGATCATCATTGGACTTGTATTTAACCTTCTGCAAATCGCATTCTCCCTCTTTAACATAGTTAAGAATGGAGACGGTACTATATTATTCGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCAACAGGAGCAGCAGCTGGATTTGGAGTTGGAGTTGATTTGAAAAAAGTAGATCCAGATGATTTGTTCAGAATATTCTTTGATAAGGCCTATGCAGCTTCAACTCTTCTTTTGTTTGCTTTCTTTTGCTCTGCAGCTGTCTCCATTCTCTCTTCATTTGCACTTTCCAAGAGATCTTAA

Coding sequence (CDS)

ATGGAAAATTCAAGTGGTTCAAGGATAACTTCTCTTATATTGAGAATACTAACATTTGTTTTTCTTTTCATCTCCTTCTTCATTCTTATCACCACTTCTCAAACTGTTCGACCATATAAGCTTCATTTCAATGATTATCATGGTTTTAGGTATATGCTTGCTACGATCATCATTGGACTTGTATTTAACCTTCTGCAAATCGCATTCTCCCTCTTTAACATAGTTAAGAATGGAGACGGTACTATATTATTCGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCAACAGGAGCAGCAGCTGGATTTGGAGTTGGAGTTGATTTGAAAAAAGTAGATCCAGATGATTTGTTCAGAATATTCTTTGATAAGGCCTATGCAGCTTCAACTCTTCTTTTGTTTGCTTTCTTTTGCTCTGCAGCTGTCTCCATTCTCTCTTCATTTGCACTTTCCAAGAGATCTTAA

Protein sequence

MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS*

Homology

[Close]

BLAST of CsaV3_5G026540 vs. NCBI nr
Match: XP_004142832.1 (CASP-like protein 4D1 [Cucumis sativus] >KGN51296.1 hypothetical protein Csa_007994 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 156
           IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS
Sbjct: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 155

[Close]

BLAST of CsaV3_5G026540 vs. NCBI nr
Match: XP_008458890.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 150/155 (96.77%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           MENSSGSR+TSLILRILTFVFLFISFFILITTSQTVRPYKLHFN YHGFRYMLATIIIGL
Sbjct: 1   MENSSGSRVTSLILRILTFVFLFISFFILITTSQTVRPYKLHFNSYHGFRYMLATIIIGL 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKK DPDDLFR
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKKDPDDLFR 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 156
            FFDKAYAAS LLLFAFFCSAAVSILSSFALSKRS
Sbjct: 121 TFFDKAYAASALLLFAFFCSAAVSILSSFALSKRS 155

[Close]

BLAST of CsaV3_5G026540 vs. NCBI nr
Match: XP_038877616.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 138/155 (89.03%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           MENSSGSR+TSLILRILTFVFLFISFFILITTSQTV+  KLHFN YH FRYMLATIIIG+
Sbjct: 1   MENSSGSRVTSLILRILTFVFLFISFFILITTSQTVQSVKLHFNYYHAFRYMLATIIIGI 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSLFNIVKNG+ TILFDFFGDKFLSYLL TG AAGFG+ VDLKK+DPDD F 
Sbjct: 61  VFNLLQIAFSLFNIVKNGNSTILFDFFGDKFLSYLLGTGTAAGFGLSVDLKKIDPDDFFG 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 156
            FFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS
Sbjct: 121 SFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 155

[Close]

BLAST of CsaV3_5G026540 vs. NCBI nr
Match: XP_022992767.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 241.1 bits (614), Expect = 6.3e-60
Identity = 126/154 (81.82%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           MENSSG+R+T LILRILTFVFLFISFF+L+TTSQTV   K HFN++H +RY+LATIIIG+
Sbjct: 1   MENSSGARVTCLILRILTFVFLFISFFVLVTTSQTVESVKFHFNNFHTYRYVLATIIIGI 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSLFNIVK   GTILFDFFGDKFLSYLLATG AAGFG+ VDL+ +DPDD F 
Sbjct: 61  VFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQTLDPDDYFG 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
            FFDKAYAAS LLLFAFFCSAAVSILSSFALSKR
Sbjct: 121 TFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CsaV3_5G026540 vs. NCBI nr
Match: XP_023549516.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 125/154 (81.17%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           MENSSG+R+T LILRILTFVFLFISFF+L+TTSQTV   K HFN++H +RY+LATIIIG+
Sbjct: 1   MENSSGARVTCLILRILTFVFLFISFFVLVTTSQTVESVKFHFNNFHTYRYVLATIIIGI 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSLFNIVK   GTILFDFFGDKFLSYLLATG AAGFG+ VDL+ +DPDD F 
Sbjct: 61  VFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQTLDPDDYFG 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
            FFDKAYAAS LLLFAFFCSAAVSI+SSFALSKR
Sbjct: 121 TFFDKAYAASALLLFAFFCSAAVSIISSFALSKR 154

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.4e-31
Identity = 79/161 (49.07%), Postives = 107/161 (66.46%), Query Frame = 0


Query: 4   SSGSRITSLILRILTFVFLFISFFILITTSQTVR----PYKLHFNDYHGFRYMLATIIIG 63
           S  SR+ +LILRILTF+FL  S  IL T + T+       K+HF D + +RYMLATI+IG
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIG 66

Query: 64  LVFNLLQIAFSLF-----NIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKV- 123
           L + +LQIAF+L+     N + +GDG + FDFFGDK +SY+L TGAAAGF    D+K V 
Sbjct: 67  LAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVF 126

Query: 124 DPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
                F  F +K YA+++LLL  F C+A +S+ SS+AL K+
Sbjct: 127 SGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYALPKQ 167

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-29
Identity = 77/159 (48.43%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 3   NSSGSRITSLILRILTFVFLFISFFILITTSQT--VRPYKLHFNDYHGFRYMLATIIIGL 62
           +S+GSR   L+LR+LTFVFL I+  ++    QT      ++ FND + +RYM++TIIIG 
Sbjct: 13  SSTGSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGF 72

Query: 63  VFNLLQIAFSLFNIVK-----NGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDP 122
            +NLLQ+A S+F +V      +GDG  LFDFFGDK +SYLL +G+AAGFGV V+L +  P
Sbjct: 73  AYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVP 132

Query: 123 DDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
            +    F DKA A+++LLL AF  +A  S  +SFAL K+
Sbjct: 133 SN---SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-27
Identity = 71/152 (46.71%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 11  SLILRILTFVFLFISFFILITTSQTVR----PYKLHFNDYHGFRYMLATIIIGLVFNLLQ 70
           SLI+RILT + L ISF ++ T +QTV       K+ F D++ +RY++AT+IIG+ + LLQ
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLLQ 73

Query: 71  IAFSLFNIVK----NGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFRIF 130
           IAFS+  +       G+G +LFDF+GDKF+SY L TGAAA FG+  DLK+++  D +  F
Sbjct: 74  IAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLKQLEGSDNYSKF 133

Query: 131 FDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
            + + AA++L L  FF + A SI SS+ L KR
Sbjct: 134 LNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 9.6e-27
Identity = 71/158 (44.94%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 7   SRITSLILRILTFVFLFISFFILITTSQTVR----PYKLHFNDYHGFRYMLATIIIGLVF 66
           SR+T+L LR+LTF FL +S  I+ T + T+      +K+   D++ +RYMLA I  GL +
Sbjct: 19  SRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGIDEFKVRSKDFYSYRYMLAAIAFGLTY 78

Query: 67  NLLQIAFSLFNIVK------NGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPD 126
            +LQIA +L +I K      +GDG ++FDF+GDK +SY+LATGAAA FG   +LK     
Sbjct: 79  TILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQLAG 138

Query: 127 DLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
                FF+K YA+++LLL  F C+A +S+ SS+AL K+
Sbjct: 139 LGGDKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-25
Identity = 74/162 (45.68%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 8   RITSLILRILTFVFLFISFFILITTSQTV----RPYKLHFNDYHGFRYMLATIIIGLVFN 67
           ++  L+LR+LT VFL I+  IL T S T+       K HF D + +RYML+  +IGLV+ 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQIAFSLFNI---VKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK-------KV 127
           ++Q+ F++      VKN     L DF+GDK +SYL+ATG+AAGFGV  DLK        +
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQL-DFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 DPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 156
           D  D    FF K YA+++LLLFAF C A +S+ SSFA++KR+
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKRN 174

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy TrEMBL
Match: A0A0A0KU83 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 156
           IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS
Sbjct: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 155

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy TrEMBL
Match: A0A1S3C9H1 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.4e-73
Identity = 150/155 (96.77%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           MENSSGSR+TSLILRILTFVFLFISFFILITTSQTVRPYKLHFN YHGFRYMLATIIIGL
Sbjct: 1   MENSSGSRVTSLILRILTFVFLFISFFILITTSQTVRPYKLHFNSYHGFRYMLATIIIGL 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKK DPDDLFR
Sbjct: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKKDPDDLFR 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 156
            FFDKAYAAS LLLFAFFCSAAVSILSSFALSKRS
Sbjct: 121 TFFDKAYAASALLLFAFFCSAAVSILSSFALSKRS 155

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy TrEMBL
Match: A0A6J1JQU5 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489006 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 126/154 (81.82%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           MENSSG+R+T LILRILTFVFLFISFF+L+TTSQTV   K HFN++H +RY+LATIIIG+
Sbjct: 1   MENSSGARVTCLILRILTFVFLFISFFVLVTTSQTVESVKFHFNNFHTYRYVLATIIIGI 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSLFNIVK   GTILFDFFGDKFLSYLLATG AAGFG+ VDL+ +DPDD F 
Sbjct: 61  VFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQTLDPDDYFG 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
            FFDKAYAAS LLLFAFFCSAAVSILSSFALSKR
Sbjct: 121 TFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy TrEMBL
Match: A0A6J1FGY1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445381 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 123/154 (79.87%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           ME+SSG+R+T LILRILTFVFLFISFF+L+TTSQTV   K HFN++H +RY+LATIIIG+
Sbjct: 1   MESSSGARVTCLILRILTFVFLFISFFVLVTTSQTVESVKFHFNNFHTYRYVLATIIIGV 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFR 120
           VFNLLQIAFSL NIVK   GTILFDFFGDKFLSYLLATG AAGFG+ VDL+ +DPDD F 
Sbjct: 61  VFNLLQIAFSLLNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQTLDPDDYFG 120

Query: 121 IFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
            FFDKAYAAS LLLFAFFCSAAVSI+SSFALSKR
Sbjct: 121 TFFDKAYAASALLLFAFFCSAAVSIISSFALSKR 154

[Close]

BLAST of CsaV3_5G026540 vs. ExPASy TrEMBL
Match: A0A6J1FG26 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445380 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58
Identity = 126/155 (81.29%), Postives = 138/155 (89.03%), Query Frame = 0


Query: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGL 60
           ME SS SR+T L+LRILTFVFLFISFFILITTSQTV+  K HFND+H +RY+LATII+ +
Sbjct: 1   METSSASRVTCLVLRILTFVFLFISFFILITTSQTVQSIKFHFNDFHTYRYVLATIIVEI 60

Query: 61  VFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKV-DPDDLF 120
           VFNLLQIAFSLFNIVKN +GTILFDFFGDKFLSYLLAT  AAGFGV VDL++  DP+DLF
Sbjct: 61  VFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVSVDLQRTKDPEDLF 120

Query: 121 RIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
             FFDKAYAAS LLLFAFFCSAAVSILSSFALSKR
Sbjct: 121 GTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 155

[Close]

BLAST of CsaV3_5G026540 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-26
Identity = 74/162 (45.68%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 8   RITSLILRILTFVFLFISFFILITTSQTV----RPYKLHFNDYHGFRYMLATIIIGLVFN 67
           ++  L+LR+LT VFL I+  IL T S T+       K HF D + +RYML+  +IGLV+ 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQIAFSLFNI---VKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK-------KV 127
           ++Q+ F++      VKN     L DF+GDK +SYL+ATG+AAGFGV  DLK        +
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQL-DFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 DPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 156
           D  D    FF K YA+++LLLFAF C A +S+ SSFA++KR+
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKRN 174

[Close]

BLAST of CsaV3_5G026540 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-24
Identity = 73/160 (45.62%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 8   RITSLILRILTFVFLFISFFILITTSQTVR----PYKLHFNDYHGFRYMLATIIIGLVFN 67
           R   L+LR+LT  FL I+  ++ T + T+       KL FND + +RYML+  +IGLV+ 
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQ--IAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK-------KVD 127
           ++Q  +  S F   K    T  FDF+GDK +SYLLATG+AAGFGV  DLK       + D
Sbjct: 74  VVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFD 133

Query: 128 PDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 155
             D    FF K YA+++LLLFAF   A +S+ SS ALSKR
Sbjct: 134 STDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKR 173

[Close]

BLAST of CsaV3_5G026540 vs. TAIR 10
Match: AT2G38480.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 52.8 bits (125), Expect = 3.0e-07
Identity = 46/147 (31.29%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 11  SLILRILTFVFLFISFFILITTSQTVRPYKLHFNDYHGFRYMLATIIIGLVFNLLQIAFS 70
           S I R +  +F  I+F I+++       Y  +FNDY  +RY+LA  II  ++   Q  F+
Sbjct: 48  SPITRGICLLFSLIAFLIMVSNK---HGYGRNFNDYEEYRYVLAISIISTLYTAWQ-TFA 107

Query: 71  LFNIVKNGD--GTILFDFFGDKFLSYLLATGAAAGFGVGVDLKKVDPDDLFRIFFDKAYA 130
            F+  +  D   +IL DF GD+ ++YLL + A++     + L  +  +    IF D A +
Sbjct: 108 HFSKREIFDRRTSILVDFSGDQIVAYLLISAASS----AIPLTNIFREGQDNIFTDSAAS 167

Query: 131 ASTLLLFAFFCSAAVSILSSFALSKRS 156
           A ++ +FAF   A  ++ S + LS  S
Sbjct: 168 AISMAIFAFIALALSALFSGYKLSTHS 186

The following BLAST results are available for this feature:

BLAST of CsaV3_5G026540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142832.1	2.4e-75	100.00	CASP-like protein 4D1 [Cucumis sativus] >KGN51296.1 hypothetical protein Csa_007...	[more]
XP_008458890.1	1.1e-72	96.77	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]
XP_038877616.1	1.3e-65	89.03	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_022992767.1	6.3e-60	81.82	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_023549516.1	1.1e-59	81.17	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G026540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	8.4e-31	49.07	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	2.1e-29	48.43	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
A1XGB4	1.5e-27	46.71	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
B9NBE5	9.6e-27	44.94	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
Q56X75	4.0e-25	45.68	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]

BLAST of CsaV3_5G026540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU83	1.2e-75	100.00	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1	[more]
A0A1S3C9H1	5.4e-73	96.77	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1	[more]
A0A6J1JQU5	3.1e-60	81.82	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489006 PE=3 SV=1	[more]
A0A6J1FGY1	1.3e-58	79.87	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445381 PE=3 SV=1	[more]
A0A6J1FG26	2.9e-58	81.29	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445380 PE=3 SV=1	[more]

BLAST of CsaV3_5G026540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	2.9e-26	45.68	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	1.6e-24	45.63	Uncharacterised protein family (UPF0497)	[more]
AT2G38480.1	3.0e-07	31.29	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..139 e-value: 6.4E-22 score: 78.0
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..154
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 4..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G026540.1	CsaV3_5G026540.1	mRNA