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CsaV3_5G026140 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTCACTACCTACTCACTCACTTCTCTTCATTCCGTGATATCTACACATTTCTCACCGAACCTTTTTCGATGGCTCGTCTAGGTGGACTTCAGGTCGAGACCGTTAACTTTCCCGCCGAAATCAAGCCTCCGGCCTCCGCTAACACTCTTTTTCTCGGCGGTGCAGGTACCAATAAGAACCATTTCATTTCCTCTGATGTGATCCGCGATAGATTGTGATTGTGGAAAATTTTGTACAGGAGTTAGGGCATTGGAGATCGGAGGAAATACTGTGAAATTTACTGCGATCGGTATTTATTTGGAGGACAAAGCTGTGCCGTCGCTCGCCGGTAAGTGGAGTGGAAAGAGTGCGGCGGAGTTAATGGATTCCGTTGAGTTCTTCAGGGACGTTGTCACTGGTGAGCTGCTGATTTTGTTTATTTTTTTAAAATCTGTGCTTGAAACTTGAAAGTTAGAAATTGCTGCCAGATTTCTGCCGTGCCGGCCGCCGGTGTTCCGGTGGTTTTGTTGAAGTAAATTTGTTTTGGAGTAATACAATATTAGCATATGAATCTTATTAATAAAAATCCTTAAAAATAACTTTTAAAACGAAATCTCAGATAAAAATATAAATCTTAAATTTAGGAATCTTATTGCAACCAAATTCAAATATCAATATAACATTTTAACATTTTAAAAGTACATTTTAAAATTAAAAGCTTAAATGAAAAATGTTTTTTTTTTCTTCACATGAATTTAATTCAAGTAATTTGTCTACAAGTAAAAAGTTATTTAATAGCTATGCACTTTTTGAAGTAGTGCATTCTTAAACTTTTGGGAATTCAAAATTGAATGTTTAAAATCTTATTAAACAAAGTTCAATTGAATTAACGTATTGACATAGTTTTAATCAATTGATAATATTAAATATCACCAAGCTCTCTATTTAGTCACTAAATTGACAAAATTGGAGGCTGAGGCATCTTTTGAAAACATATGGAAGTTTATTCTTCAAATCTTGAGTAGGACATGATAAGATAATTGACATGAACAACCTAATTGCAAATCTTTGTAAATCCAAAGAATGATGTTAAGAATTTTAATAACAAAATTGATTTCTGATTTGTGACTTTATGTACACTGTAGTTATGAGGTGCAAAATTGATTGAATAATATATTTGATTATATTTCAGGGGGTTTCGAGAAGTTTACAAATGTGACATTAATATTGCCACTCACGGGTGAACAATATGCTATGAAAGTGGCAGAGAATTGTGAAGCAGCTTGGAAATCCATGGGAATTTATAGTGATGAAGGAGCTGAAGCCATTCAAAAGTTCATCGATATCTTCAAAAATGAAAATTTCCCTCCTGGCTCCTCCATTCTTTTCACCCATTTGCCTCCTAATACCTTATCGGTTAGTCCAGTTTTCACTCTTTTGATTAAATTTGATTCTTTCAAATGAAATAAAAATGAAAATGGTAAGAATAAAATGATAGTTTTTTATGATCCAAAATGAATATATTTAAGATAAGAGGACTAAAATAAGTCAAAGTTGAACGTAGATGGACTAAAATAAACATATTGAATGTGTGAAAATTTTAAAGACTAAAGTAGTATTTAAACCTCTTCTTACTCACGTATGAGCTATTTTGTTTTAAATTTATGAAATTTTTGAAGAATTAATTGTTAACCTTTATTAAAAGTTTAAGAATGGTATAAGGACTAAATATACTTTGAACCTAAAAAATATTATTGTAAAATATAATTAATCTATTAACTTAATTTAAAGTTTAGGAATCAAAATTTAACTATTCTTATCTTTCAATTTTTTTTTCAAAATAAATTATTATATATATATATATATATATAATTATAAAAAATAGCCAAATGGACAAACAATTAACCATTTATAATAAAATTAAGTGGAACAAGTTTCTGTTTTTGTTTTTTTTATTTTGTTATAAGGTGTAAATTATATATTTTTTTATTATTCTCGAAAAAACTCATTTTTTTTTTATTAATACTGAGATATTAATGAAAAAGATTGAAAGGAAGTGGCCATCCAAAATTCTCAATAAATATCTTTGCATATTAATTGTGAACACGGTGGTACTTGAAAAGAGTTGTTGAAGTGTTTAAATACAACTATTTGATTTTACTAAAAAGAGAAGTAATAATGTTTGGTTAAGATTTTTAATAGTGGCAAAAAAGTGTTCTTGTCTATTTGAAATTACTTCTAAATTTTGTGATGTGAAATTTAGATTACCGTTAAAGTCCTCATACCCAATCTTCCCATTTACTGTAGTTGAAAATATCATATCATTTATTTCTATCTCCAAACACACACATCATTAAAATCAAATCATTTCAACAGTATCGATATAATTGAAAGAAGCTATTGGAAGCCATTTAAGAGTAATTTTGGATGCAGATTAGCTTTTCAAAAGATGGGAGTATTGGTGAAAAAGAAGAAGAGATGGTGAAAAAAATAGAGAACAAACTGCTTAGTGAATCTGTTTTGGAGTCCATTGTTGGAAAAAATGGGGTTTCACCAGCTGCAAGGCTTAGTTTGGCTTCAAGATTATCCCATCTCTTCAATCTATCTCAACCCAACATTTCCAACCCTTTTCAAGATCCTAAATCCGAACCAAATAGGATCCACTTATCCACATAGGTGCATTCTAAGACTCATCCTTCTGCATTGTTTTCTCGCTCTTAAAGTGTTGTAATAACTGAATTCTAATTTACTCGCTGCTTTTCTCCTTCATTATTATTATTTGAGTTCTAATACTACTTTAGTATTTGAGTTCTAATACTACTTTAGTATTTGAGTT ATGGCTCGTCTAGGTGGACTTCAGGTCGAGACCGTTAACTTTCCCGCCGAAATCAAGCCTCCGGCCTCCGCTAACACTCTTTTTCTCGGCGGTGCAGGAGTTAGGGCATTGGAGATCGGAGGAAATACTGTGAAATTTACTGCGATCGGTATTTATTTGGAGGACAAAGCTGTGCCGTCGCTCGCCGGTAAGTGGAGTGGAAAGAGTGCGGCGGAGTTAATGGATTCCGTTGAGTTCTTCAGGGACGTTGTCACTGGGGGTTTCGAGAAGTTTACAAATGTGACATTAATATTGCCACTCACGGGTGAACAATATGCTATGAAAGTGGCAGAGAATTGTGAAGCAGCTTGGAAATCCATGGGAATTTATAGTGATGAAGGAGCTGAAGCCATTCAAAAGTTCATCGATATCTTCAAAAATGAAAATTTCCCTCCTGGCTCCTCCATTCTTTTCACCCATTTGCCTCCTAATACCTTATCGATTAGCTTTTCAAAAGATGGGAGTATTGGTGAAAAAGAAGAAGAGATGGTGAAAAAAATAGAGAACAAACTGCTTAGTGAATCTGTTTTGGAGTCCATTGTTGGAAAAAATGGGGTTTCACCAGCTGCAAGGCTTAGTTTGGCTTCAAGATTATCCCATCTCTTCAATCTATCTCAACCCAACATTTCCAACCCTTTTCAAGATCCTAAATCCGAACCAAATAGGATCCACTTATCCACATAG ATGGCTCGTCTAGGTGGACTTCAGGTCGAGACCGTTAACTTTCCCGCCGAAATCAAGCCTCCGGCCTCCGCTAACACTCTTTTTCTCGGCGGTGCAGGAGTTAGGGCATTGGAGATCGGAGGAAATACTGTGAAATTTACTGCGATCGGTATTTATTTGGAGGACAAAGCTGTGCCGTCGCTCGCCGGTAAGTGGAGTGGAAAGAGTGCGGCGGAGTTAATGGATTCCGTTGAGTTCTTCAGGGACGTTGTCACTGGGGGTTTCGAGAAGTTTACAAATGTGACATTAATATTGCCACTCACGGGTGAACAATATGCTATGAAAGTGGCAGAGAATTGTGAAGCAGCTTGGAAATCCATGGGAATTTATAGTGATGAAGGAGCTGAAGCCATTCAAAAGTTCATCGATATCTTCAAAAATGAAAATTTCCCTCCTGGCTCCTCCATTCTTTTCACCCATTTGCCTCCTAATACCTTATCGATTAGCTTTTCAAAAGATGGGAGTATTGGTGAAAAAGAAGAAGAGATGGTGAAAAAAATAGAGAACAAACTGCTTAGTGAATCTGTTTTGGAGTCCATTGTTGGAAAAAATGGGGTTTCACCAGCTGCAAGGCTTAGTTTGGCTTCAAGATTATCCCATCTCTTCAATCTATCTCAACCCAACATTTCCAACCCTTTTCAAGATCCTAAATCCGAACCAAATAGGATCCACTTATCCACATAG MARLGGLQVETVNFPAEIKPPASANTLFLGGAGVRALEIGGNTVKFTAIGIYLEDKAVPSLAGKWSGKSAAELMDSVEFFRDVVTGGFEKFTNVTLILPLTGEQYAMKVAENCEAAWKSMGIYSDEGAEAIQKFIDIFKNENFPPGSSILFTHLPPNTLSISFSKDGSIGEKEEEMVKKIENKLLSESVLESIVGKNGVSPAARLSLASRLSHLFNLSQPNISNPFQDPKSEPNRIHLST* Homology
BLAST of CsaV3_5G026140 vs. NCBI nr
Match: XP_004149817.1 (chalcone--flavonone isomerase [Cucumis sativus] >KGN51256.1 hypothetical protein Csa_007806 [Cucumis sativus]) HSP 1 Score: 474.6 bits (1220), Expect = 5.2e-130 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. NCBI nr
Match: XP_008463530.1 (PREDICTED: chalcone--flavonone isomerase [Cucumis melo] >TYK05753.1 chalcone--flavonone isomerase [Cucumis melo var. makuwa]) HSP 1 Score: 411.0 bits (1055), Expect = 7.1e-111 Identity = 208/234 (88.89%), Postives = 219/234 (93.59%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. NCBI nr
Match: XP_038890831.1 (chalcone--flavonone isomerase [Benincasa hispida]) HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101 Identity = 192/224 (85.71%), Postives = 203/224 (90.62%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. NCBI nr
Match: XP_022133567.1 (chalcone--flavonone isomerase [Momordica charantia]) HSP 1 Score: 347.8 bits (891), Expect = 7.4e-92 Identity = 180/214 (84.11%), Postives = 190/214 (88.79%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. NCBI nr
Match: XP_023549701.1 (chalcone--flavonone isomerase [Cucurbita pepo subsp. pepo] >XP_023549702.1 chalcone--flavonone isomerase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 326.2 bits (835), Expect = 2.3e-85 Identity = 166/213 (77.93%), Postives = 185/213 (86.85%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy Swiss-Prot
Match: A5HBK6 (Chalcone--flavanone isomerase OS=Pyrus communis OX=23211 GN=CHI PE=2 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.7e-75 Identity = 143/213 (67.14%), Postives = 170/213 (79.81%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy Swiss-Prot
Match: O65333 (Chalcone--flavanone isomerase OS=Elaeagnus umbellata OX=43233 GN=CHI PE=2 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.2e-73 Identity = 142/230 (61.74%), Postives = 176/230 (76.52%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy Swiss-Prot
Match: Q4AE11 (Chalcone--flavanone isomerase 1 OS=Fragaria ananassa OX=3747 GN=CHI1 PE=2 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.7e-73 Identity = 138/213 (64.79%), Postives = 168/213 (78.87%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy Swiss-Prot
Match: Q4AE12 (Chalcone--flavanone isomerase 2 OS=Fragaria ananassa OX=3747 GN=CHI2 PE=2 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 6.1e-73 Identity = 138/213 (64.79%), Postives = 167/213 (78.40%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy Swiss-Prot
Match: A2IBF8 (Chalcone--flavanone isomerase OS=Gossypium hirsutum OX=3635 GN=CHI PE=2 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.3e-72 Identity = 140/210 (66.67%), Postives = 164/210 (78.10%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy TrEMBL
Match: A0A0A0KU44 (Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_5G505170 PE=3 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.5e-130 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy TrEMBL
Match: A0A5D3C1D7 (Chalcone-flavonone isomerase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002420 PE=3 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.4e-111 Identity = 208/234 (88.89%), Postives = 219/234 (93.59%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy TrEMBL
Match: A0A1S3CJH4 (Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103501663 PE=3 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.4e-111 Identity = 208/234 (88.89%), Postives = 219/234 (93.59%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy TrEMBL
Match: A0A6J1BX19 (Chalcone-flavonone isomerase family protein OS=Momordica charantia OX=3673 GN=LOC111006117 PE=3 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.6e-92 Identity = 180/214 (84.11%), Postives = 190/214 (88.79%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. ExPASy TrEMBL
Match: A0A6J1K162 (Chalcone-flavonone isomerase family protein OS=Cucurbita maxima OX=3661 GN=LOC111489212 PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 7.2e-85 Identity = 167/213 (78.40%), Postives = 184/213 (86.38%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. TAIR 10
Match: AT3G55120.1 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 248.1 bits (632), Expect = 7.4e-66 Identity = 124/208 (59.62%), Postives = 156/208 (75.00%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. TAIR 10
Match: AT5G66230.2 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 200.3 bits (508), Expect = 1.8e-51 Identity = 109/223 (48.88%), Postives = 144/223 (64.57%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. TAIR 10
Match: AT5G66220.1 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41 Identity = 86/164 (52.44%), Postives = 115/164 (70.12%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. TAIR 10
Match: AT5G05270.1 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 81.6 bits (200), Expect = 9.2e-16 Identity = 58/207 (28.02%), Postives = 95/207 (45.89%), Query Frame = 0
BLAST of CsaV3_5G026140 vs. TAIR 10
Match: AT5G05270.2 (Chalcone-flavanone isomerase family protein ) HSP 1 Score: 81.6 bits (200), Expect = 9.2e-16 Identity = 58/207 (28.02%), Postives = 95/207 (45.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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