CsaV3_5G024920 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G024920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	chr5: 19910094 .. 19915077 (+)
RNA-Seq Expression	CsaV3_5G024920
Synteny	CsaV3_5G024920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGAATTTTGTATATATATTTTAAAAAAAATTAAATTCAAAAGAGAAAAAAATAAAAATAAAGAAGAATTGAAGGGAAGGGCATTTTGGAATATTAACACCCAAAATTGTACTAAAACTTAATCTCTAGTTTTTGAATACGGACGACCTAAAACCCTCAAAATTCAACTATTTTTTTTCCTTTTGGTAATTTCCTAAACAAGTTGTGAGGTTATAGATACGAGTCTTGCGCCCTATGCGTCTCTTCTTCTGAGTTTTCGTTGTCCCTCCAAAATCCAAACCTGAAGCTTGGCGAAGATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCCACCATTGCTTCTTCTTTCCCCGCTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCAACACTTTTCCCATCCGATCTCAATTTGATCGCCACTCTAGAGGTTTTCTTCTTACCTCTTTATTTCTTCATTCATTGCCTTTTCTTTTAGGGTTTTTTTTTTTTTTTTTTTCTGGCGATGCGATGCGATTCCTTTTTCCCTCTTTTAGCCCGCCAAATCAGTATCTGGATTGCACTTGCTGTTGCCGCGTTATTGATATTCGTAATTGTTGATCTACTGTTCGATCTCTTTTGGTTATTATGATTCATGGTTTTTGTATATTGGTTTCTCGTTTTGTAAATAATTTCAATTTGTGAACAGGTTGTTTTCTGGTACTTTTGGGGCATTTTAACGATATCAATCTTCACCCAAACAATCGCTTCTTCTTCTTATTCTTTCGTTTCTAAATCTTCCACTGTGAAATGTTTCTTCTTTTTTTTTAAAAAATAAAATCTACTATTTCAGCTCATACTTTTAACATTATTTTGATCTTTCATGATATATCTACTTGAAACTACGTGATAGCATTCATATGCTATAGTACAGAAGTTTTTGTGTGAATTGGTCAGTGGGATCATATCTTACTTTAATTCCATATTTTATGTGCTTAGAAAATTTTGAATTGGTTCTGGTGAAAGCTCACCAGTATCAATATGAGGTATTTCGAATAGCAGATTTATTATAGTTCTTTTTTTTGGGCTGTTCGTTAGGTATAATTTATTGTTGTTGTTATCCACAATGTCTAAGCCATTCTCTTCCCCGTGTAGAGTGTTCATGTTATTATCAGGAAGAATTTTGATCAATTTCCTGAATTTGAATATACTATCAATAAAATTTGCTAACAGTATTTTACCTTTTTGTTGTACGAAATAATGTAGTATGAGCATAAGAATAAACGAACTAGACTATAATTACAAAATAACTTCTTCTTATGCACCATAAACAAAAAATGATTGGAGAATTCCAGACAATGGATAGACTTTTGAGAAAGATGCCTTCGATAATGGGTCCTTTCTGTTGTGTCCTTTGTCAGAAGGTGGAGGAAAACCTAGATCACTTTCTGGGAGTGTTAGTATGCGAGTTATGTGTGAAATTGCTTGTTTAGGAGTTTGATTTTGTGTTAGCTCACCAGAGGGATATTTGTATGGTGATTGGAGAGTTCCTCCTTCATCCACTTTTCAAAGAGAAAGGCTGTCTTCTGTGGTTTGTGGGTGTGTTCGGTTTTTTGTGGGATCTTTGGGGGAAGAGGAAAAACAAAGTGTTTAGAGTTGTAGATTGGGTCGCTAGTCAGGTTTTGTCCTTGATGTGGTTCCATGTTTCTTGTTGGGCTTCACTTTTGAAGAATTTTTATAATTTTTCTCTAGGAATGAACTTACTTAGTTGTGGGGTTGTAGTTTTTCCTGTGGGTTTGGGTTTTTCGTATGCACTTGTATTCTCTCATTTTTTTTCTCTCAATGAAAGCAGGTGTTTCTATAATAAAAGGGATTTCTGTTTACAACATAGGATTGTAGAGTGTTTCAATTAGATGGTGACATATTTCTCTTCTAATTAAAAACTTTGTACAATCTGTTGTTCAACTCGTTCTTTTTATTTATTCTTTCCTTCTATTGAAAAAAGGTTCGTTCATTGTACAGTCGCACAGAAAATACAGAACCCTATTTATATCGTTTTACATTCGTTTGAAATACTGACCTTGGACACCCCAAAGAAGATGTATTTGTACATTGGTACAAAAGAATCGAAAAGTGTAGGAGTTATCTTCATAGACCTGGTTTCTTTCCTTCCAGGTTCCACTCATTTGTCTCCAAAAAAATTAATCCTGCCTCTACTTTTAGTTTTAGTTTTGAAGTTAATTTGAAGAAAAACACACTAGTTCTTGCAATGTCAAAACAATGTAGATACACATTTTGGTGGATGGAAAGTCCTCCCGTTCACACCCATGAATGTTAAAGATAGTCCTGTTCCATGGGCCCTGAAGTTAAATCTATTCAAACTCGTGTTGAAAGTTCTTAAGATTTGCTCTAGAAATTAGGGAATAACAGGAACAATTATAGAATACTTTCGTTATCTTGAGAATTTGTCTTCTATGCCTCTGTGATGGTTGGTTTGTAATACTCTTTTACAAAATTGACTGGCCGTTGTAACTGAACTTTTTGTTTCTGGATATTTTATATGCACAACTAATTTATAAATATTCCTCTGTATATGCACATGGCTTGTTATGAAGTTTTACTCCCTGCCTTTTTATGAAAGTCGAGGATAGAAATATTGGTTACGAATCTATTGGCATATTGGAAATGGTTTAGAGGCATGCTTTTCTGGTCGAGCATTCTATAATTTGGTTTTATATCTAATACTAATTATTATAAATAACAATAGTAATCAAAGGCAATTATATGGTTATTGTTTGGAATCTGTCTTTGACAGTTATTGTTTAGAGGTTGTGCATGAGCTTCTCAATTTATAATTTGTGCAATGGAAATGGCTCTGCTAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAAGAAACCAATCTCTACTTTTTGAGGTAATACCGAGGTTCAAGTCCTTCAATTCTCAATTCTTATTTAAAGCAGATAAAAGTTGGAAGACATATTTTGTTTCTTCTTTACTCCTTTGAGATTTTAGAAAAAAAGCTTTATGCAGTGAGAAAACACTGTAACTGTAACATTTGCTTGGTTCATGAATGAATCTGAATAATTTTTCTGAATGAGTGGAAGTTATTAGATTAGAAGATACCACCCTCCTAGGAGTGGACAAAACAAAAAAAAAAAAATTGAGAACATGTTCAAATTTTGATGTATTTGTATGATTCATATGTTGAAAATTGTTGTACTTTCCAGAATCTGGACTGTGATTTTGAGTTTTTGGAACAAGAATATACGGACTCATGAAGATGCCTTCAACTATGGTAAAGCAGGAAAGAAAAAAAAGGGAAAAGAAAAAGAGAAACTAATAATTATTGTTCAAAAATACCTTTGACATAAACCATGCCTTTCTCACTCAACTTAAGCTCCTTTCTCATTTGGTCTATCTGTTGGTCATCTCCTTGAACAACAATCTCTCCCAACCTTCCATCTTCTCCAACTATCATTTTAACTTTGATTTCTTCCTTTCTTGATGCTTTTACCCAGTAATATGCTCCACTGCAGTTTTTAAAGAGTTTGGGGTTAGCTTTTTTTATGGTATTCTCTTGTTAATCATCTCAATCTTCAATTTTATTTTCGAAACTAAACCTTTTTTTAATGGTTGTTACTATTTGGTTCTCTTGGGCGTTCTTGTAATTGAAGCTTATTTATTCATATCTCTATATTGTTTCTTTTGTTTTTTTTTTTACTTTACACTTTTGGAATCCTTTTTTAATATTAAAAACAAAGAATCTGAAGTACTGTTAATGATATTATGAAGGTGTTGTTATAAAAAGATTAAAGTTAGTATCTTCTAAGGTTATAATCTAATGCTATTTTGTAAATAGAACTAAAAGTTAAATTAGAAGCGAATTTGCTCTTTATTTAAAAGTACCTATAACTTTCAATATAATCTTTGGTCTTTCAATATAAATTTCAAAACTAATTTTGAGATGGAATCAATTGGGACTTGAGAATAACCTAAAGTAAACAATGTGATTAGTCCCAATTTTTGTTCTGAAATTGCAGCATGATTTTCGTAAAATAGCTAAGGAATAATATTTGCATCTTTGAGAAAAGATATTGGAATAAACGGTTGTTGAGGTTATTATTAATTTAGTTTCCAAAAATAGCAAAATAAGCAGGATCGTTAATTTAGTTCTAAGAAAGATACATGAACAAATAGTAGCAAGTGAGAAACAAAATCAATTATTACGTCAGGAAGACTGGCCTAGAAATTTCTTTTTTAACTAAAGAGGCGTACATAAATTCTGAAATTTATGATTTTGTTTCTAGTTTTCTATAAA

mRNA sequence

ATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCCACCATTGCTTCTTCTTTCCCCGCTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCAACACTTTTCCCATCCGATCTCAATTTGATCGCCACTCTAGAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAA

Coding sequence (CDS)

ATGTTGAGGATTGCAGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCCACCATTGCTTCTTCTTTCCCCGCTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCAACACTTTTCCCATCCGATCTCAATTTGATCGCCACTCTAGAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAA

Protein sequence

MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG*

Homology

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BLAST of CsaV3_5G024920 vs. NCBI nr
Match: XP_004143763.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51131.1 hypothetical protein Csa_008604 [Cucumis sativus])

HSP 1 Score: 552.4 bits (1422), Expect = 2.3e-153
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

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BLAST of CsaV3_5G024920 vs. NCBI nr
Match: XP_008465498.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 539.3 bits (1388), Expect = 2.0e-149
Identity = 267/274 (97.45%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASS P SHNIIDS DSNDFRSAGFFNTFPIR  FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALASTKDDGLI+DIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

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BLAST of CsaV3_5G024920 vs. NCBI nr
Match: XP_038874657.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-142
Identity = 257/277 (92.78%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTD---SNDFRSAGFFNTFPIRSQFDR 60
           MLRIAARRLSSLSSS  RPTIASS P SH+IIDS+D   SNDFRSAGFFNTFPIR  FDR
Sbjct: 1   MLRIAARRLSSLSSSRLRPTIASSLPGSHSIIDSSDSAPSNDFRSAGFFNTFPIRPHFDR 60

Query: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
           +SRGFASDAL STKDDGLILDIPATVAA+KNPSSKIVYDDYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVDIGSLRDPQQD ERVKDPEWLVV+GVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLVVIGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

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BLAST of CsaV3_5G024920 vs. NCBI nr
Match: XP_004143762.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51130.1 hypothetical protein Csa_007786 [Cucumis sativus])

HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLR+AARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRSAGFF+TFPIR  FDR+SR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

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BLAST of CsaV3_5G024920 vs. NCBI nr
Match: XP_023550036.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 512.3 bits (1318), Expect = 2.6e-141
Identity = 250/274 (91.24%), Postives = 261/274 (95.26%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARR SSLSSSHFRPTI+SSFP SH I+DS DSNDFRS GFFNTFP    F R+ R
Sbjct: 1   MLRIAARRFSSLSSSHFRPTISSSFPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFGRNCR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STKDDGLILDIPATVAA+KNPSSKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIK+ANSVDIGSLRDPQQDEERVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKVANSVDIGSLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

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BLAST of CsaV3_5G024920 vs. ExPASy Swiss-Prot
Match: P51132 (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 2.1e-114
Identity = 207/276 (75.00%), Postives = 235/276 (85.14%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASS--FPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRH 60
           MLRIA RR SSLS    R    SS  F ++++     DS+  RS     +  + S F  H
Sbjct: 1   MLRIAGRRASSLSRWPVRSVAPSSSAFISANHFSSDDDSSSPRSI----SPSLASVFLHH 60

Query: 61  SRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVL 120
           +RGF+S++++   D GL+ D+P TVAA+KNP+SKIVYD++NHER+PPGDPSKRAFAYFVL
Sbjct: 61  TRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPC 240
           RTEDDI LANSVD+GSLRDPQQD ERVK PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPC
Sbjct: 181 RTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

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BLAST of CsaV3_5G024920 vs. ExPASy Swiss-Prot
Match: P37841 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=4113 GN=FES1 PE=1 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.0e-111
Identity = 204/274 (74.45%), Postives = 232/274 (84.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLR+A RRLSS ++       +S+F    +   + DS+  RS     +  + S F    R
Sbjct: 1   MLRVAGRRLSSSAARS-----SSTFFTRSSFTVTDDSSPARSP----SPSLTSSFLDQIR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++     GL+ D+PATVAA+KNPSSKIVYDD NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           +DDIKLANSVD+G+LRDPQQD ERVK+PEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 DDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of CsaV3_5G024920 vs. ExPASy Swiss-Prot
Match: P51133 (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.3e-111
Identity = 204/274 (74.45%), Postives = 232/274 (84.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIA R+LSS ++     T +SS   + N    TD +    A   +   + SQF    R
Sbjct: 1   MLRIAGRKLSSSAA-----TRSSSAFFTRNPFTFTDDSS-SPARSPSPASLASQFLDQFR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++     GL+ D+PATVAA+KNPSSKIVYDD NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DI LANSVD+GSLRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYSF+E NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CsaV3_5G024920 vs. ExPASy Swiss-Prot
Match: P49729 (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.9e-111
Identity = 194/253 (76.68%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 22  ASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSRGFASDALASTKDDGLILDIPA 81
           +S+F ++++     DS+  RS     +  + S F  H+RGF+S++++   D GL+ D+P 
Sbjct: 10  SSAFISANHFSSDDDSSSPRSI----SPSLASVFLHHTRGFSSNSVSPAHDMGLVPDLPP 69

Query: 82  TVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMS 141
           TVAA+KNP+SKIVYD++NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LKFVLSMS
Sbjct: 70  TVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMS 129

Query: 142 ASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQD 201
           ASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDI LANSVD+GSLRDPQQD
Sbjct: 130 ASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQD 189

Query: 202 EERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVP 261
            ERVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVP
Sbjct: 190 AERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP 249

Query: 262 TYSFLEGNKLLIG 275
           TYSFLE NKLLIG
Sbjct: 250 TYSFLEENKLLIG 258

[Close]

BLAST of CsaV3_5G024920 vs. ExPASy Swiss-Prot
Match: P51135 (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.9e-111
Identity = 202/274 (73.72%), Postives = 232/274 (84.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIA R+LSS +++      +SS   + N    TD +   +     T  + SQF    R
Sbjct: 1   MLRIAGRKLSSSAAAR-----SSSAFFTRNPFTFTDDSSSPTRSPSPT-SLASQFLDQFR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++     GL+ D+PATVAA+KNPSSKIVYDD NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           ++DI LANSVD+GSLRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 DEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYSF+E NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CsaV3_5G024920 vs. ExPASy TrEMBL
Match: A0A0A0KTT3 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464800 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsaV3_5G024920 vs. ExPASy TrEMBL
Match: A0A1S3CPE6 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503117 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 9.6e-150
Identity = 267/274 (97.45%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASS P SHNIIDS DSNDFRSAGFFNTFPIR  FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALASTKDDGLI+DIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsaV3_5G024920 vs. ExPASy TrEMBL
Match: A0A0A0KNC0 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464790 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 5.6e-142
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLR+AARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRSAGFF+TFPIR  FDR+SR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsaV3_5G024920 vs. ExPASy TrEMBL
Match: A0A6J1JWJ5 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488984 PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.8e-141
Identity = 251/274 (91.61%), Postives = 259/274 (94.53%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARR SSLSSSHFRPTIASS P SH I+DS DSNDFRS GFFNTFP    FDR  R
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STKDDGLILDIPATVAA+KNPSSKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDI SLRDPQQDEERVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of CsaV3_5G024920 vs. ExPASy TrEMBL
Match: A0A1S3CP16 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503125 PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 4.8e-141
Identity = 250/274 (91.24%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60
           MLRIAARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRS GFFNTFPI   FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDSNDFRSGGFFNTFPIGPHFDRNSR 60

Query: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL+S K+  L+ D+PATVAAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsaV3_5G024920 vs. TAIR 10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 396.0 bits (1016), Expect = 2.5e-110
Identity = 203/275 (73.82%), Postives = 225/275 (81.82%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRH-S 60
           MLR+A RRL S+S    R + A+SF  S +   S    D  SA         S + R   
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAPRSLPSADLSSYHRSLI 60

Query: 61  RGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLS 120
           RGF+S  LA   + G   ++PATV AVK P+SKIVYDD+NHER+PPGDPSKRAFAYFVLS
Sbjct: 61  RGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLS 120

Query: 121 GGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRR 180
           GGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVFIRRR
Sbjct: 121 GGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 180

Query: 181 TEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCH 240
           TEDDIKLANSVD+GSLRDPQ+D  RVK+PEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCH
Sbjct: 181 TEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCH 240

Query: 241 GSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           GSHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 GSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CsaV3_5G024920 vs. TAIR 10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 394.8 bits (1013), Expect = 5.6e-110
Identity = 201/277 (72.56%), Postives = 226/277 (81.59%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSFPAS--HNIIDSTDSND-FRSAGFFNTFPIRSQFDR 60
           MLR+A RRL S+S    R + A+SF  S  H + D  +S+   RS    +     S    
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSRDHTLSDGGNSSSASRSVPSADLSSFNSYHRS 60

Query: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120
             RGFAS  +    + G   ++PATV AVK P+SKIVYDD+NHER+PPGDPSKRAFAYFV
Sbjct: 61  VIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of CsaV3_5G024920 vs. TAIR 10
Match: AT4G03280.1 (photosynthetic electron transfer C )

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-09
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 207 DPEWLVVV-----------GVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAP 266
           DP +LVV             VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP
Sbjct: 136 DPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAP 195

Query: 267 YNLEVPTYSFLEGNKLL 273
            +L +      E  K+L
Sbjct: 196 LSLALAHADIDEAGKVL 211

[Close]

BLAST of CsaV3_5G024920 vs. TAIR 10
Match: AT4G03280.2 (photosynthetic electron transfer C )

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-09
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 207 DPEWLVVV-----------GVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAP 266
           DP +LVV             VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP
Sbjct: 117 DPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAP 176

Query: 267 YNLEVPTYSFLEGNKLL 273
            +L +      E  K+L
Sbjct: 177 LSLALAHADIDEAGKVL 192

The following BLAST results are available for this feature:

BLAST of CsaV3_5G024920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143763.1	2.3e-153	100.00	cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51...	[more]
XP_008465498.1	2.0e-149	97.45	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_038874657.1	1.1e-142	92.78	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida]	[more]
XP_004143762.1	1.2e-141	91.24	cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51...	[more]
XP_023550036.1	2.6e-141	91.24	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo sub...	[more]

BLAST of CsaV3_5G024920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51132	2.1e-114	75.00	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P37841	1.0e-111	74.45	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=41...	[more]
P51133	1.3e-111	74.45	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P49729	2.9e-111	76.68	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
P51135	2.9e-111	73.72	Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=...	[more]

BLAST of CsaV3_5G024920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTT3	1.1e-153	100.00	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
A0A1S3CPE6	9.6e-150	97.45	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KNC0	5.6e-142	91.24	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
A0A6J1JWJ5	2.8e-141	91.61	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita maxima OX=366...	[more]
A0A1S3CP16	4.8e-141	91.24	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CsaV3_5G024920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13430.1	2.5e-110	73.82	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13440.1	5.6e-110	72.56	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	2.5e-09	38.96	photosynthetic electron transfer C	[more]
AT4G03280.2	2.5e-09	38.96	photosynthetic electron transfer C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 212..223 score: 68.96 coord: 234..246 score: 71.54 coord: 246..258 score: 69.81
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 157..260 e-value: 2.6E-12 score: 46.5
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 204..272 score: 18.750664
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAM	TIGR01416	TIGR01416	coord: 130..274 e-value: 1.2E-54 score: 182.9
IPR004192	Cytochrome b-c1 complex subunit Rieske, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 99..145 e-value: 2.7E-11 score: 43.8
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 143..274 e-value: 3.2E-59 score: 200.8
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 136..273
None	No IPR available	PANTHER	PTHR10134:SF36	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..274
None	No IPR available	CDD	cd03470	Rieske_cytochrome_bc1	coord: 151..274 e-value: 5.48906E-85 score: 248.243
None	No IPR available	SUPERFAMILY	81502	ISP transmembrane anchor	coord: 85..147
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G024920.1	CsaV3_5G024920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity