CsaV3_5G024910 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G024910
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	chr5: 19901170 .. 19905146 (+)
RNA-Seq Expression	CsaV3_5G024910
Synteny	CsaV3_5G024910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATTGAAGAAAAAGAAGAAAAGGAAAGGAAAGGAAAGGAAAGGTGAAAAACAACTTAACGATGGCCGAAGAAGCAAAAACAAAAATTGAGGTCAAATAGACGAGTCTTGTACCCTATGCGTTTCTTCTTCTGAGTTCTCGTTATCCCTCCCAAACTCAAACCTGAAGCCTTACGAAGATGTTGAGGGTTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATCCGACCTCACTTTGATCGCAACTCTAGAGGTTATCTTCTTACTTCTTTATTTCTTAATTCCTGCTCCTTCTTCATTAGTTTCCTTTTTTTAGGGTTTGTTTTTTCTAGCGACGCGATGCGATTCCTTTTTCGCTCTTTTAGAGCGCAAAATCATATCTGGATTGCACTTGCTATTGCCGCGTTATAGGTTTTCATCTTTGTTGTTCTACTGTTCGATCTCTATTTTATTATTTTGATTCATGTTTTTTGTATATTGGTTTCTCGTTTTGTAAATAATTTCAATTTGTGAACAAGTTGTTTTCTGGTACTTTTGTGGCGTTTTAACGATATCAATCTTCACCGAACAATCGCTTCTTCTTCTTCTCCTTTCGTTTCTAAATCTTCCACTGTGAAATGTTTCTTCATCCCAAAAAAAACTTCTACCATTTCAGCTCATACTTTTAACTTTATTTTGATCTTTTATGTTATATCTACTTCAAACTACGTGATATCATTCATATGCTATATTGCCGAGAATTATTCTGTTAGTACAGAAGTTTTTGTGTGAATTGGTCGGTGGGATTATATGTTACTTTAATTCCATATTTTATGTGCTTAGAAAATTTTGAATTGGTTCTGGTGAAAGCCCACCAATATCAATATGAGGTATTTCGATTAGCAGATTTATTTTAGTTTTTCTTTTATTTGGCTGTTCGTTGGGTATAATTTATTGTTGTTGAAAGAGTGTTGTTAGATGTTTAAGCCATTGTCTTCCCTGTGTAGAGTGTTTATGTTATTATCGGGAAGAATTTTGATCAATTTTCTGAATTTGAATACACTATCAATAAAGTTTGCTAACAGTATTTTACCGTTTTGTTGCAAGAAATAATGTAGTACGAGTATAAGAATAGACGAACTAGGCTATAATTGCAAACTAACTTCTTATATACCACAAGGAAGTGACTGGAATTGCTATAATTACAAAATAACTTCTTATGTACCATAAAGAAGAAGTGATTGGAGAATTCCAGACACTGGGTAGACTTTTGAGAAAGATGCCTTCGGTAATGGGTCCTTTTTGTTGTCTCCTTTGTGGGAAGGCGGAGAAAAACCTAGATCACCTTCTGGGAGTGTTAGTATGCTAGTTATGTGAGAAATTTCTATTTTAGGACTTTGATTTTGTGTTAGCTCACCAGAGGGATATTTGTATTGTGATTGGAGAGTTCCTTCATCCACCTTTCAAAGAGAAAGGCTGTTTTTGTGGTTTGTGGGTGTGTTCGTTTTGCTGTGGGATCTTCGGGGGAAGAGGAAAAACGTGTTTAGAGTTGTAGATTGGGTCGCTATTGAGGTTTGATCCTTGGTGAGGTTCCATGTTACTCGTTGGGTTTCAGTTTTGAAGAATTTTTATAATTGTTCTCTAGGCAAGATCTTACTTAGTTGTGGGGTTGGAGTTTTTCCTGTGGGTTTTGGTTTTTTTTATGCACTTGTATTCTCTAGTTTTTTTTCTCAATGAAAGCAGGTGTTTCTATAAAAAAGGAATATCTTTTTACAATATGGTATTGTAGTGTTTCAATTAGATGGTGACATATTTCACTTCTAATTAAAAACTTTGTACACTCTGTTGTTCAACTTGTTTTTTTATTCATTCCTTCCTTCAATTTAAAGAAGGTTCATTCATTGTACAGTCGCACAGAAAATACAGATCCCTATTTCTATCGTTTTACATTCATTTGAAATACTGACCCTGGACACCCCAAAGAAGATGTATTTGTATATTGTTACAAAAGAACCGAAAAGTGTAGGAGTTATCTTTAAAGACCTGGTTTCTCCTTCCAGGTTCCACCCATTTGTCTCTAAAAAAAATTAATCCTCCCCCTACTTTTAGTTTTAGTCTTGAAGTTAATTTGAAGAAAAACACGCTAGTTCTTGCAACGTCGAAACAAGGTCTGCCTTTCATTTTGATGGATGGAAAGTCCTCCCTAAAGGCTCACACCCGTGAATATTAAAGACAATCCTGCTCCATTGGCCCTGAAGTTAAATCTATTCGAACTCAGTTGAAAATTCTTAAGATTTGTTCTAGAAATTTGGGATAACAAGAACAATTACACAACCTGGCTTGAACAGGGTCTGTTCTACAGGTTGTACATCTGTATCTTTGAGTTCTAAGGATAACAAAAACAATTACAGAATACTTTTGTTATCTTGAGAATTTGTCTTCTATGCCTCTTTGATGATTGGTTTGTATTCTTCTGCAAAATTGACTGGCCATTGTGGCTGAAGTTTTTATTTCTGGATGCTTTATACAAATTAGTTGTGTATGCACAACTAATTTCTGGATATTTTATACATGTATTACTGCTCTAGAAGTTGTCAAAACTTTAATCCTGCATATAGGTTATAGCGACAAAATCGTTCATCACTAAATTTTGTACCAATAAGCAGGCAACATAAATTTAAGGAAGAGTGCATTCTGGCTAAGGTGATTGATCTGGGTGATTGCGTTCAGTTATATTTGTAACTCAGTCCTTTTATTATGACTATTGAGTGATTTTTCCTTTCTCCTATGGTGAAGTTTTATGATTTTATACAAATATCTCTTTGCAGGTTTCGCGTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTACTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTAGCCCTTGCCTCGCTTGAGGTCGACCTCTCTAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATTGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAAGATGAGAAGAAGAAATGAAGCTCTTTTTTCAGGGTTTGTGTAGTAGTGATTTTGAAACCTTCATCAAATGATAATGTCGAAGATTTATTGCAGACATAATTTTATTATTTTATTTCTTTGAGTTCATCTTTTTCTTTATGCAATGAGAATACTGTAACACTCCCGTATCTTGGTGCATTAATGTATCTGAATAAGTTGCTTCACAATGGGTGGTTGCCCCATTAAGTGATTGGAGACCATCTTTTTTATTATGGATGCTAAATTGCTTTATTTACTTTTTGCTTTTTATAATTGGTAGCAATTTATAGGTACATTTGAGCATCTTGATAAAAACATATATGGGGTATACATGTCACATATGAATTGCCAATGCTCTGTAGATGTGTTTGAGTAATGCCAAAGCTCTTTTGAAAATAA

mRNA sequence

ATGTTGAGGGTTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATCCGACCTCACTTTGATCGCAACTCTAGAGGTTTCGCGTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTACTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTAGCCCTTGCCTCGCTTGAGGTCGACCTCTCTAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATTGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

Coding sequence (CDS)

ATGTTGAGGGTTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATCCGACCTCACTTTGATCGCAACTCTAGAGGTTTCGCGTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTACTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTAGCCCTTGCCTCGCTTGAGGTCGACCTCTCTAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATTGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

Protein sequence

MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG*

Homology

[Close]

BLAST of CsaV3_5G024910 vs. NCBI nr
Match: XP_004143762.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51130.1 hypothetical protein Csa_007786 [Cucumis sativus])

HSP 1 Score: 556.6 bits (1433), Expect = 1.2e-154
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. NCBI nr
Match: XP_008465508.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 538.1 bits (1385), Expect = 4.4e-149
Identity = 263/274 (95.99%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SHNIIDSTDSNDFRS GFF+TFPI PHFDRNSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDSNDFRSGGFFNTFPIGPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL+S KE NLVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDIKLANSVDIGTLRDPQQDGERVKDPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. NCBI nr
Match: XP_008465498.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 521.5 bits (1342), Expect = 4.3e-144
Identity = 253/274 (92.34%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SHNIIDS DSNDFRSAGFF+TFPIRPHFDRNSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. NCBI nr
Match: XP_004143763.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51131.1 hypothetical protein Csa_008604 [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 5.2e-142
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRSAGFF+TFPIR  FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. NCBI nr
Match: XP_038874657.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 514.2 bits (1323), Expect = 6.8e-142
Identity = 249/277 (89.89%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTD---SNDFRSAGFFHTFPIRPHFDR 60
           MLR+AARRLSSLSSS  RPTIASSLP SH+IIDS+D   SNDFRSAGFF+TFPIRPHFDR
Sbjct: 1   MLRIAARRLSSLSSSRLRPTIASSLPGSHSIIDSSDSAPSNDFRSAGFFNTFPIRPHFDR 60

Query: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           NSRGFASDALTSTK++ L+ D+PAT+AA+KNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWLVV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLVVIGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy Swiss-Prot
Match: P51132 (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.9e-113
Identity = 203/276 (73.55%), Postives = 233/276 (84.42%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDST--DSNDFRSAGFFHTFPIRPHFDRN 60
           MLR+A RR SSLS    R  + S  P S   I +    S+D  S+    +  +   F  +
Sbjct: 1   MLRIAGRRASSLS----RWPVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHH 60

Query: 61  SRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVL 120
           +RGF+S++++   +  LVPD+P T+AA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL
Sbjct: 61  TRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPC 240
           RTE+DI LANSVD+G+LRDPQQD ERVK PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPC
Sbjct: 181 RTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy Swiss-Prot
Match: P49729 (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.9e-110
Identity = 185/220 (84.09%), Postives = 209/220 (95.00%), Query Frame = 0


Query: 55  FDRNSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 114
           F  ++RGF+S++++   +  LVPD+P T+AA+KNPTSKIVYDE+NHER+PPGDPSKRAFA
Sbjct: 39  FLHHTRGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFA 98

Query: 115 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPV 174
           YFVL+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPV
Sbjct: 99  YFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPV 158

Query: 175 FIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGW 234
           FIRRRTE+DI LANSVD+G+LRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGW
Sbjct: 159 FIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGW 218

Query: 235 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 219 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 258

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy Swiss-Prot
Match: P51133 (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.5e-110
Identity = 200/276 (72.46%), Postives = 231/276 (83.70%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTD--SNDFRSAGFFHTFPIRPHFDRN 60
           MLR+A R+LSS ++     T +SS   + N    TD  S+  RS        +   F   
Sbjct: 1   MLRIAGRKLSSSAA-----TRSSSAFFTRNPFTFTDDSSSPARSPS---PASLASQFLDQ 60

Query: 61  SRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVL 120
            RGF+S++++   +  LV D+PAT+AA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL
Sbjct: 61  FRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPC 240
           RTEEDI LANSVD+G+LRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPC
Sbjct: 181 RTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy Swiss-Prot
Match: P51135 (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.5e-110
Identity = 196/274 (71.53%), Postives = 230/274 (83.94%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+A R+LSS +++      +SS   + N    TD +   +     T  +   F    R
Sbjct: 1   MLRIAGRKLSSSAAAR-----SSSAFFTRNPFTFTDDSSSPTRSPSPT-SLASQFLDQFR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LV D+PAT+AA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           +EDI LANSVD+G+LRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 DEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy Swiss-Prot
Match: P37841 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=4113 GN=FES1 PE=1 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 7.1e-110
Identity = 201/274 (73.36%), Postives = 230/274 (83.94%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLRVA RRLSS ++         S   S  + D  DS+  RS     +  +   F    R
Sbjct: 1   MLRVAGRRLSSSAARSSSTFFTRS---SFTVTD--DSSPARSP----SPSLTSSFLDQIR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LV D+PAT+AA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           ++DIKLANSVD+GTLRDPQQD ERVK+PEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 DDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy TrEMBL
Match: A0A0A0KNC0 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464790 PE=3 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 5.8e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy TrEMBL
Match: A0A1S3CP16 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503125 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.1e-149
Identity = 263/274 (95.99%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SHNIIDSTDSNDFRS GFF+TFPI PHFDRNSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDSNDFRSGGFFNTFPIGPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL+S KE NLVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDIKLANSVDIGTLRDPQQDGERVKDPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy TrEMBL
Match: A0A1S3CPE6 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503117 PE=3 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 2.1e-144
Identity = 253/274 (92.34%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SHNIIDS DSNDFRSAGFF+TFPIRPHFDRNSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy TrEMBL
Match: A0A0A0KTT3 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464800 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.5e-142
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRSAGFF+TFPIR  FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. ExPASy TrEMBL
Match: A0A6J1FFG4 (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444974 PE=3 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 9.0e-140
Identity = 250/277 (90.25%), Postives = 261/277 (94.22%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTD---SNDFRSAGFFHTFPIRPHFDR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SH IID  D   SNDFRS   F+TFP  P FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDALTSTKE +LVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQD ERVKDPEWL+VVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of CsaV3_5G024910 vs. TAIR 10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 390.2 bits (1001), Expect = 1.4e-108
Identity = 199/280 (71.07%), Postives = 225/280 (80.36%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNS- 60
           MLRVA RRL S+S    R + A+S  LS    D T S+   S+    + P       NS 
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSR---DHTLSDGGNSSSASRSVPSADLSSFNSY 60

Query: 61  -----RGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 120
                RGFAS  +T   E     +VPAT+ AVK P SKIVYD++NHER+PPGDPSKRAFA
Sbjct: 61  HRSVIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFA 120

Query: 121 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPV 180
           YFVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPV
Sbjct: 121 YFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPV 180

Query: 181 FIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGW 240
           FIRRRTE+DIKLANSVD+G+LRDPQ+D  RVK+PEWL+VVGVCTHLGCIPLPNAGD+GGW
Sbjct: 181 FIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGW 240

Query: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of CsaV3_5G024910 vs. TAIR 10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit )

HSP 1 Score: 386.0 bits (990), Expect = 2.6e-107
Identity = 195/275 (70.91%), Postives = 222/275 (80.73%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSA-GFFHTFPIRPHFDRNS 60
           MLRVA RRL S+S    R + A+S  +S +   S    D  SA     +  +  +     
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAPRSLPSADLSSYHRSLI 60

Query: 61  RGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLS 120
           RGF+S  L    E     +VPAT+ AVK P SKIVYD++NHER+PPGDPSKRAFAYFVLS
Sbjct: 61  RGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLS 120

Query: 121 GGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRR 180
           GGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPVFIRRR
Sbjct: 121 GGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 180

Query: 181 TEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCH 240
           TE+DIKLANSVD+G+LRDPQ+D  RVK+PEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCH
Sbjct: 181 TEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCH 240

Query: 241 GSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           GSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 GSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CsaV3_5G024910 vs. TAIR 10
Match: AT4G03280.1 (photosynthetic electron transfer C )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 207 DPEWLVVV-----------GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAP 266
           DP +LVV             VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP
Sbjct: 136 DPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAP 195

Query: 267 YNLEVPTYTFLEDNKLL 273
            +L +      E  K+L
Sbjct: 196 LSLALAHADIDEAGKVL 211

[Close]

BLAST of CsaV3_5G024910 vs. TAIR 10
Match: AT4G03280.2 (photosynthetic electron transfer C )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 207 DPEWLVVV-----------GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAP 266
           DP +LVV             VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP
Sbjct: 117 DPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAP 176

Query: 267 YNLEVPTYTFLEDNKLL 273
            +L +      E  K+L
Sbjct: 177 LSLALAHADIDEAGKVL 192

The following BLAST results are available for this feature:

BLAST of CsaV3_5G024910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143762.1	1.2e-154	100.00	cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51...	[more]
XP_008465508.1	4.4e-149	95.99	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_008465498.1	4.3e-144	92.34	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_004143763.1	5.2e-142	91.24	cytochrome b-c1 complex subunit Rieske-4, mitochondrial [Cucumis sativus] >KGN51...	[more]
XP_038874657.1	6.8e-142	89.89	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Benincasa hispida]	[more]

BLAST of CsaV3_5G024910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51132	6.9e-113	73.55	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P49729	1.9e-110	84.09	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
P51133	2.5e-110	72.46	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P51135	5.5e-110	71.53	Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=...	[more]
P37841	7.1e-110	73.36	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=41...	[more]

BLAST of CsaV3_5G024910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNC0	5.8e-155	100.00	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
A0A1S3CP16	2.1e-149	95.99	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3CPE6	2.1e-144	92.34	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KTT3	2.5e-142	91.24	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
A0A6J1FFG4	9.0e-140	90.25	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucurbita moschata OX=3...	[more]

BLAST of CsaV3_5G024910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13440.1	1.4e-108	71.07	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	2.6e-107	70.91	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	5.6e-09	38.96	photosynthetic electron transfer C	[more]
AT4G03280.2	5.6e-09	38.96	photosynthetic electron transfer C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 212..223 score: 68.96 coord: 234..246 score: 71.54 coord: 246..258 score: 69.81
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 143..274 e-value: 1.6E-59 score: 201.7
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 136..273
IPR004192	Cytochrome b-c1 complex subunit Rieske, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 96..145 e-value: 1.9E-11 score: 44.3
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 157..260 e-value: 4.0E-12 score: 45.9
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 184..272 score: 18.805016
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAM	TIGR01416	TIGR01416	coord: 130..274 e-value: 2.3E-55 score: 185.3
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..274
None	No IPR available	PANTHER	PTHR10134:SF36	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..274
None	No IPR available	CDD	cd03470	Rieske_cytochrome_bc1	coord: 151..274 e-value: 1.0767E-85 score: 249.784
None	No IPR available	SUPERFAMILY	81502	ISP transmembrane anchor	coord: 85..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G024910.1	CsaV3_5G024910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity