CsaV3_5G024860 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G024860
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Chloride channel protein 1
Location	chr5: 19813309 .. 19815315 (+)
RNA-Seq Expression	CsaV3_5G024860
Synteny	CsaV3_5G024860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTTGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGGAGAAGGATAATCGTAATCAGTCGGAAAACCACATCATTACAGAGCCTCACCTCCCCAAGCACGAGCCGAGGCCTCAATCTCCTCCCCTCAACCAGTAATTTTTTTACCATTTCTTTAGATTTTTTAACCCTCAAGCCGAAGAGTTCCAATTCGGATTGCTTTTTCTCTATTCCAATCGATTTTCCATCATTTTCCTCTTCTAATTTTTTCATAGCCAAATACGTTTAATCTTCGGTGTTAATTACTACTTGTTCATCCCGAAAAATCGAAGGTTTTATACTACTTCTCCTTAATTTTGTATTGTATCTTTTTTAGGGTTGTTGTTATTAGCTAAACTGGGAGGAAGGGAGATTGTTGAGTGGTTCTTTAAATATTAGCGATATTGTGCTTGTACTATTGAGTTGCTCTCTCCTTTTAGGGAATGCCTTAGCTGCTGATTCGATTGCCATGACCTTGGAACAAAATATTTGCTGTTTTTAGGTTTGGATTGTGTTAGGTCAGGTTTAATTTATTTCCTTATGATTGGCTCTGTACTCTGTAGGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGGGCTTCCTGATGCTTCTTTACTCTTGAATTCTCCAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCGTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAATTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGGCTTTGTTGGTTCCACCTCAGCTTACTGGAAGGTTTGTTCTAATGCATTTCCAGTTTCCCCTTATTTTCCTTTTGTTTATGCTGGTTTTTGCTTTCATTTTTTTACACTGTTCCTTGAATAATAAAATAATTGGTTTGATGCATTTACATATATATATATATAATTTCTGCAGTCCGCTCTAGGTGATGAAAATCAAATCATTTCAAAATCTTTGTACATACTAATGAGTACATTGGCATAGGTAGAGTAGATTCATAAGGTACTTGTATCCTTGTGAGGTGATAGATTGAAAAAAGTTCCAATTCATTCCTCAGCTAGAAAACACAATGAATAAATAAATCATTTCATTATAGCGTATAGGACTATTAAGTATGCATGTGTGTATTCTTCTAGCCCTAAAAAATTGTAATAAGTTTATGCCCCTCCACCGACCTCTCTCTGGAGTCGTATGAAAAGCTCTGATTCTAAGTTCAGTAGACATGATCATAATAGCAATGTATTACTTACTACTAAGTTTGGTATAAGATAAGCATGGTTTGTGGACTTCTGGCTATGAATAGTCTGTAAGCCTATTTATTGTTTTTAATGAATATTAGTGTTTGAAATTTTGTTAATAAACTTGGTTCTAGTTATATTCTATGAAAGTAAATGCAGAACTATGGCTGTTGATAAACATCATTTGCTGCCTTGCAAGAACTCTGAAAATCTGATTTACTATTGCTTAAAAGTAACCGTAACTGCTTTAAGATACATTCACTGGTTTAAGTCAGAAGGAAATTTGACAATTAAACAGCGCTATGATATCACCTTAAGAAGCAAACACTAGTAGTGTGAAAACTCAAGCTCAAGCTCGCGCGTTTTTTATTCAGTTTAGAAGTTTGAAATATATGATTTTAGGTGAATTCCTATTGCAATTTTGCACCTAAAATTTATTATTTTATTTATTCTGATAGCTATTCTGCATCTTTGGCAGGAGTAACATTGTCACCGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTTGTAATGGTTATTGTCCTTTTCGTTAACTTTCAGATTGATTGGTGTATTGCAGTTGTACAATGTGAAGAATAGTGTACTGATGTTTACTTACAGATAA

mRNA sequence

ATGTCACTTGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGGAGAAGGATAATCGTAATCAGTCGGAAAACCACATCATTACAGAGCCTCACCTCCCCAAGCACGAGCCGAGGCCTCAATCTCCTCCCCTCAACCAGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGGGCTTCCTGATGCTTCTTTACTCTTGAATTCTCCAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCGTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAATTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGGCTTTGTTGGTTCCACCTCAGCTTACTGGAAGGAGTAACATTGTCACCGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTTATAA

Coding sequence (CDS)

ATGTCACTTGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGGAGAAGGATAATCGTAATCAGTCGGAAAACCACATCATTACAGAGCCTCACCTCCCCAAGCACGAGCCGAGGCCTCAATCTCCTCCCCTCAACCAGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGGGCTTCCTGATGCTTCTTTACTCTTGAATTCTCCAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCGTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAATTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGGCTTTGTTGGTTCCACCTCAGCTTACTGGAAGGAGTAACATTGTCACCGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTTATAA

Protein sequence

MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQFETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSSLPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPPL*

Homology

[Close]

BLAST of CsaV3_5G024860 vs. NCBI nr
Match: XP_004143757.1 (uncharacterized protein LOC101221543 isoform X2 [Cucumis sativus] >XP_011655268.1 uncharacterized protein LOC101221543 isoform X3 [Cucumis sativus] >KGN51124.1 hypothetical protein Csa_008852 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 3.1e-87
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPPL 175
           LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPPL
Sbjct: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPPL 174

[Close]

BLAST of CsaV3_5G024860 vs. NCBI nr
Match: XP_031740899.1 (uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 8.9e-87
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 174
           LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 173

[Close]

BLAST of CsaV3_5G024860 vs. NCBI nr
Match: XP_008465558.1 (PREDICTED: uncharacterized protein LOC103503186 [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 4.7e-80
Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEE++DNRNQSENH +TEP LPK+EPRPQSPP+NQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWV LPDASLLLNS TSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 174
           LPRSK PRSSLPHSKNVPDTSG LLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPP 173

[Close]

BLAST of CsaV3_5G024860 vs. NCBI nr
Match: KAA0066062.1 (chloride channel protein 1 [Cucumis melo var. makuwa] >TYJ99835.1 chloride channel protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74
Identity = 153/166 (92.17%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEE++DNRNQSE H +TEP LPK+EPRPQSPP+NQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSEKHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWV LPDASLLLNS TSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFV 167
           LPRSK PRSSLPHSKNVPDTSG LLVPPQLTGRSNIVTEDISKLF+
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFL 166

[Close]

BLAST of CsaV3_5G024860 vs. NCBI nr
Match: XP_038874519.1 (uncharacterized protein LOC120067146 [Benincasa hispida])

HSP 1 Score: 276.6 bits (706), Expect = 1.5e-70
Identity = 151/175 (86.29%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEE--KDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPN 60
           MSLVDYASSD+DVPAA EEEE  +DNR +SEN  + EP  PKHEPRP+SPP+NQPI+KPN
Sbjct: 1   MSLVDYASSDDDVPAAEEEEEVAEDNRKKSENRTVAEPQFPKHEPRPKSPPVNQPILKPN 60

Query: 61  QQFETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLG 120
           QQFET EE  SVP V LPDASLLLNSP+SSSLFSGSDHSSRVAAAMAANASRKRETNVLG
Sbjct: 61  QQFETKEE-PSVPSVELPDASLLLNSPSSSSLFSGSDHSSRVAAAMAANASRKRETNVLG 120

Query: 121 SSLPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 174
           SSLPRSK PRSSLPHSKNVPDTSG+LLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 SSLPRSKVPRSSLPHSKNVPDTSGSLLVPPQLTGRSNIVTEDISKLFVKKSAKPP 174

[Close]

BLAST of CsaV3_5G024860 vs. ExPASy TrEMBL
Match: A0A0A0KQH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457750 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPPL 175
           LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPPL
Sbjct: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPPL 174

[Close]

BLAST of CsaV3_5G024860 vs. ExPASy TrEMBL
Match: A0A1S3CP27 (uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.3e-80
Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEE++DNRNQSENH +TEP LPK+EPRPQSPP+NQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWV LPDASLLLNS TSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 174
           LPRSK PRSSLPHSKNVPDTSG LLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPP 173

[Close]

BLAST of CsaV3_5G024860 vs. ExPASy TrEMBL
Match: A0A5A7VCK3 (Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00410 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.9e-75
Identity = 153/166 (92.17%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEE++DNRNQSE H +TEP LPK+EPRPQSPP+NQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSEKHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWV LPDASLLLNS TSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFV 167
           LPRSK PRSSLPHSKNVPDTSG LLVPPQLTGRSNIVTEDISKLF+
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFL 166

[Close]

BLAST of CsaV3_5G024860 vs. ExPASy TrEMBL
Match: A0A6J1CIF3 (WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=3673 GN=LOC111011781 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 139/172 (80.81%), Postives = 147/172 (85.47%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60
           MSLVDYASSD+DVPAA EEE+  N  Q ENH + EP  PKHEP+PQ PPLNQPI+KPNQ 
Sbjct: 1   MSLVDYASSDDDVPAAAEEEQ--NPEQPENHRVEEPQFPKHEPQPQPPPLNQPILKPNQP 60

Query: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
            ETN + SSV  V LPDASLLLNSPTSSSLF GSDHSSRVAAAMAANASRKRETNV  S+
Sbjct: 61  LETNGD-SSVFSVELPDASLLLNSPTSSSLFGGSDHSSRVAAAMAANASRKRETNVSASA 120

Query: 121 LPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKP 173
           LPRSK PRS+LPHSKNVPDT G  LVPPQLTGRSNIVTEDISKLFVKKSAKP
Sbjct: 121 LPRSKVPRSTLPHSKNVPDTLGRSLVPPQLTGRSNIVTEDISKLFVKKSAKP 169

[Close]

BLAST of CsaV3_5G024860 vs. ExPASy TrEMBL
Match: A0A6J1JRA7 (uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487632 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.6e-60
Identity = 137/175 (78.29%), Postives = 147/175 (84.00%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAV---EEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKP 60
           MSLVDYASSD+D  AA    EEE++ NR + E+H   EP  P  EPR QS P+NQPI+KP
Sbjct: 1   MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQPILKP 60

Query: 61  NQQFETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVL 120
            Q  ETNE+ SSVP V LPDASLLLNSPTSSSL SGSDHSSRVAAAMAANASRKRETNVL
Sbjct: 61  KQPSETNED-SSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVL 120

Query: 121 GSSLPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKP 173
           GSSLPRSK PRS+LPHSKNVP+T G LLVPPQLTGRSNIVTEDISKLFVKKSAKP
Sbjct: 121 GSSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTGRSNIVTEDISKLFVKKSAKP 174

[Close]

BLAST of CsaV3_5G024860 vs. TAIR 10
Match: AT5G13470.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-25
Identity = 86/171 (50.29%), Postives = 106/171 (61.99%), Query Frame = 0


Query: 1   MSLVDY--ASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPN 60
           MSLVDY  +SSD+DV AA   EEK               LP+ + R  SP  + P     
Sbjct: 1   MSLVDYDDSSSDDDVLAA---EEKP--------------LPQTQKRLVSPAQSFP--PKR 60

Query: 61  QQFETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLG 120
           Q+FE +E         LPDA LLL SPT + + +G DH+S VAAAMA +A RKR+ +   
Sbjct: 61  QRFEQDESVEK-----LPDALLLLESPTLAQV-TGGDHASVVAAAMAESALRKRDLSGNA 120

Query: 121 SSLP-RSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKK 169
           SSLP R K PR +LPHSKN P+T G +LVPPQL GRSN+ TED+S+LFVKK
Sbjct: 121 SSLPRRPKLPRGNLPHSKNYPETLGNVLVPPQLKGRSNVATEDMSRLFVKK 146

The following BLAST results are available for this feature:

BLAST of CsaV3_5G024860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143757.1	3.1e-87	100.00	uncharacterized protein LOC101221543 isoform X2 [Cucumis sativus] >XP_011655268....	[more]
XP_031740899.1	8.9e-87	100.00	uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus]	[more]
XP_008465558.1	4.7e-80	93.64	PREDICTED: uncharacterized protein LOC103503186 [Cucumis melo]	[more]
KAA0066062.1	1.0e-74	92.17	chloride channel protein 1 [Cucumis melo var. makuwa] >TYJ99835.1 chloride chann...	[more]
XP_038874519.1	1.5e-70	86.29	uncharacterized protein LOC120067146 [Benincasa hispida]	[more]

BLAST of CsaV3_5G024860 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G024860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQH2	1.5e-87	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457750 PE=4 SV=1	[more]
A0A1S3CP27	2.3e-80	93.64	uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=...	[more]
A0A5A7VCK3	4.9e-75	92.17	Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1CIF3	2.1e-62	80.81	WW domain-containing adapter protein with coiled-coil OS=Momordica charantia OX=...	[more]
A0A6J1JRA7	2.6e-60	78.29	uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsaV3_5G024860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13470.1	4.6e-25	50.29	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..42
None	No IPR available	PANTHER	PTHR33912:SF3	OS01G0939400 PROTEIN	coord: 1..171
IPR040381	Uncharacterized protein At4g14450-like	PANTHER	PTHR33912	OS01G0939400 PROTEIN	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G024860.1	CsaV3_5G024860.1	mRNA