CsaV3_5G024460 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCAGTGTGGTTGCACAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTTTACAAGAATGAAATGCAAACTTTCACGACAAAGATAGTAAATATGTGTAAACAAGCCAATCTCTTTGCTTCACAAGGAGGGCCAATAATATTAGCTCAAATCGAGAATGAGTATGGAAATGTGATGACACCAGCTTATGGAGATGCAGGAAAAGCATACATCAATTGGTGTGCTCAAATGGCCGAATCTCTCAATATTGGCGTTCCATGGATCATGTGCCAACAAAGTGATGCCCCACAACCTATGATTAATACATGCAATGGATTCTATTGTGATAACTTTACTCCAAACAATCCTAAGAGCCCAAAAATGTTCACTGAAAATTGGGTGGGATGGTTCAAGAAATGGGGCGACAAAGACCCTTATAGAACTGCAGAAGATGTAGCATTTTCTGTGGCAAGATTTTTTCAATCTGGTGGTGTCTTCAACAATTATTACATGTATCATGGAGGCACCAACTTTGGAAGGACATCGGGAGGTCCATTCATCACTACATCTTACGACTACAACGCCCCACTTGATGAGTATGGGAACTTGAATCAACCTAA ATGAGGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCAGTGTGGTTGCACAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTTTACAAGAATGAAATGCAAACTTTCACGACAAAGATAGTAAATATGTGTAAACAAGCCAATCTCTTTGCTTCACAAGGAGGGCCAATAATATTAGCTCAAATCGAGAATGAGTATGGAAATGTGATGACACCAGCTTATGGAGATGCACCAACTTTGGAAGGACATCGGGAGGTCCATTCATCACTACATCTTACGACTACAACGCCCCACTTGATGAGTATGGGAACTTGA ATGAGGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCAGTGTGGTTGCACAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTTTACAAGAATGAAATGCAAACTTTCACGACAAAGATAGTAAATATGTGTAAACAAGCCAATCTCTTTGCTTCACAAGGAGGGCCAATAATATTAGCTCAAATCGAGAATGAGTATGGAAATGTGATGACACCAGCTTATGGAGATGCACCAACTTTGGAAGGACATCGGGAGGTCCATTCATCACTACATCTTACGACTACAACGCCCCACTTGATGAGTATGGGAACTTGA MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMTPAYGDAPTLEGHREVHSSLHLTTTTPHLMSMGT* Homology
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: KAE8648449.1 (hypothetical protein Csa_023675 [Cucumis sativus]) HSP 1 Score: 238.4 bits (607), Expect = 2.9e-59 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: XP_008437707.1 (PREDICTED: beta-galactosidase 7-like, partial [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: KAA0055105.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa]) HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: XP_011648551.2 (LOW QUALITY PROTEIN: beta-galactosidase 15 [Cucumis sativus]) HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. NCBI nr
Match: KAE8650649.1 (hypothetical protein Csa_023687 [Cucumis sativus]) HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy Swiss-Prot
Match: Q9C6W4 (Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 9.2e-32 Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy Swiss-Prot
Match: P49676 (Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-31 Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy Swiss-Prot
Match: Q9SCV5 (Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2) HSP 1 Score: 134.4 bits (337), Expect = 7.8e-31 Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy Swiss-Prot
Match: Q9SCV4 (Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2) HSP 1 Score: 134.0 bits (336), Expect = 1.0e-30 Identity = 66/110 (60.00%), Postives = 78/110 (70.91%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy Swiss-Prot
Match: Q10NX8 (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE=1 SV=2) HSP 1 Score: 129.0 bits (323), Expect = 3.3e-29 Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy TrEMBL
Match: A0A5A7UNA7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001360 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy TrEMBL
Match: A0A5D3DUP4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00870 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy TrEMBL
Match: A0A5A7UJD2 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00340 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy TrEMBL
Match: A0A5A7V9Y9 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00750 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. ExPASy TrEMBL
Match: A0A5A7UN87 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00310 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. TAIR 10
Match: AT1G31740.1 (beta-galactosidase 15 ) HSP 1 Score: 137.5 bits (345), Expect = 6.5e-33 Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. TAIR 10
Match: AT5G20710.1 (beta-galactosidase 7 ) HSP 1 Score: 134.4 bits (337), Expect = 5.5e-32 Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 ) HSP 1 Score: 134.0 bits (336), Expect = 7.2e-32 Identity = 66/110 (60.00%), Postives = 78/110 (70.91%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. TAIR 10
Match: AT2G28470.2 (beta-galactosidase 8 ) HSP 1 Score: 134.0 bits (336), Expect = 7.2e-32 Identity = 66/110 (60.00%), Postives = 78/110 (70.91%), Query Frame = 0
BLAST of CsaV3_5G024460 vs. TAIR 10
Match: AT2G32810.1 (beta galactosidase 9 ) HSP 1 Score: 119.8 bits (299), Expect = 1.4e-27 Identity = 50/75 (66.67%), Postives = 64/75 (85.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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