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CsaV3_5G024430 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACAGGCAGATATATCTATGGCAGATTCTAGATCTGGTATTGACATTTTTTTTATATATCTATTCCTCTAGCGAGTTTGTTATATTTGTCAAAATAAGCGTAAATCATTGGATACTTTCAAACTTGTAATATTGATAGAGTTGCATTTTGTGCAGTGGTAAGACTTAGAAGAGCTGAAAAACCAGTCCATTATACTTTACAAATCAACTCATTTTCTTCGCTGAAGGCTGCTGTTGCTGCTTCCAATTGTGACAGATATGAATCACAGGTCTTCAATGTCGGAGGTTATAAATGGTAATAAATTTAAATTTCTTTCAATATCATCTACTTATATATATATATATATATATATAGTCTCTTTGGGATATATAATGTTTGATTGCAGGAAATTAGCTCTGTATCCGAATGGAGATAAAAGAAGAAATGGGGAAACCATATTTCTATGTATTTGGTGACAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGGTAATTAAACCTAGACCCTAAAACCATGTTTTAATGTAATTATTATTTTAACCAAAAACATGTGAGAAGGTGTACTAAGTATTTGAACTAGATTGATACATTCTCAACATCCTAAATTTAAAAAAAAACTGAAAAGCATGTTTTATGTCAATATTTTTTTCATGAAAAAAATCAATCTCTTCCGTTTAACTTTGCATTCTTCTACTTATTTATATGTTGTGTCCAAATTAATATGATTCAGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGTAATGAAAATTTATTTTGAATTATTTGTATATGAAGTTATATTAATATATATATGTAGATATTACACTTAATGATTTTATGTTTCAGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA ATGAAACAGGCAGATATATCTATGGCAGATTCTAGATCTGTGGTAAGACTTAGAAGAGCTGAAAAACCAGTCCATTATACTTTACAAATCAACTCATTTTCTTCGCTGAAGGCTGCTGTTGCTGCTTCCAATTGTGACAGATATGAATCACAGGTCTTCAATGTCGGAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA ATGAAACAGGCAGATATATCTATGGCAGATTCTAGATCTGTGGTAAGACTTAGAAGAGCTGAAAAACCAGTCCATTATACTTTACAAATCAACTCATTTTCTTCGCTGAAGGCTGCTGTTGCTGCTTCCAATTGTGACAGATATGAATCACAGGTCTTCAATGTCGGAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA MKQADISMADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVGVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH* Homology
BLAST of CsaV3_5G024430 vs. NCBI nr
Match: KAE8648446.1 (hypothetical protein Csa_009369 [Cucumis sativus]) HSP 1 Score: 442.2 bits (1136), Expect = 2.6e-120 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. NCBI nr
Match: XP_011656220.1 (uncharacterized protein LOC105435676 [Cucumis sativus]) HSP 1 Score: 350.5 bits (898), Expect = 1.0e-92 Identity = 179/212 (84.43%), Postives = 180/212 (84.91%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida]) HSP 1 Score: 237.7 bits (605), Expect = 9.8e-59 Identity = 127/241 (52.70%), Postives = 156/241 (64.73%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. NCBI nr
Match: XP_022146383.1 (uncharacterized protein LOC111015611 [Momordica charantia]) HSP 1 Score: 228.0 bits (580), Expect = 7.8e-56 Identity = 123/234 (52.56%), Postives = 148/234 (63.25%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida]) HSP 1 Score: 228.0 bits (580), Expect = 7.8e-56 Identity = 123/232 (53.02%), Postives = 148/232 (63.79%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 6.5e-05 Identity = 22/65 (33.85%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9M2H5 (MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN=At3g58410 PE=4 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04 Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9C869 (MATH domain and coiled-coil domain-containing protein At1g31400 OS=Arabidopsis thaliana OX=3702 GN=At1g31400 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04 Identity = 21/60 (35.00%), Postives = 35/60 (58.33%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9M2J5 (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04 Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 7.2e-04 Identity = 21/67 (31.34%), Postives = 37/67 (55.22%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A0A0KRR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432540 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 3.4e-89 Identity = 164/168 (97.62%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 3.8e-56 Identity = 123/234 (52.56%), Postives = 148/234 (63.25%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 4.6e-54 Identity = 124/234 (52.99%), Postives = 149/234 (63.68%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51 Identity = 111/204 (54.41%), Postives = 142/204 (69.61%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A0A0KND8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 6.9e-50 Identity = 114/231 (49.35%), Postives = 138/231 (59.74%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT2G15710.1 (TRAF-like family protein ) HSP 1 Score: 105.9 bits (263), Expect = 4.2e-23 Identity = 68/229 (29.69%), Postives = 107/229 (46.72%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT1G69660.1 (TRAF-like family protein ) HSP 1 Score: 103.6 bits (257), Expect = 2.1e-22 Identity = 53/139 (38.13%), Postives = 80/139 (57.55%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT3G22080.1 (TRAF-like family protein ) HSP 1 Score: 102.4 bits (254), Expect = 4.6e-22 Identity = 66/231 (28.57%), Postives = 110/231 (47.62%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT5G26280.2 (TRAF-like family protein ) HSP 1 Score: 102.1 bits (253), Expect = 6.0e-22 Identity = 68/202 (33.66%), Postives = 96/202 (47.52%), Query Frame = 0
BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT3G20360.1 (TRAF-like family protein ) HSP 1 Score: 99.8 bits (247), Expect = 3.0e-21 Identity = 74/242 (30.58%), Postives = 114/242 (47.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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