CsaV3_5G024430 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G024430
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionTRAF-like family protein
Locationchr5: 19300114 .. 19301395 (-)
RNA-Seq ExpressionCsaV3_5G024430
SyntenyCsaV3_5G024430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAGGCAGATATATCTATGGCAGATTCTAGATCTGGTATTGACATTTTTTTTATATATCTATTCCTCTAGCGAGTTTGTTATATTTGTCAAAATAAGCGTAAATCATTGGATACTTTCAAACTTGTAATATTGATAGAGTTGCATTTTGTGCAGTGGTAAGACTTAGAAGAGCTGAAAAACCAGTCCATTATACTTTACAAATCAACTCATTTTCTTCGCTGAAGGCTGCTGTTGCTGCTTCCAATTGTGACAGATATGAATCACAGGTCTTCAATGTCGGAGGTTATAAATGGTAATAAATTTAAATTTCTTTCAATATCATCTACTTATATATATATATATATATATATAGTCTCTTTGGGATATATAATGTTTGATTGCAGGAAATTAGCTCTGTATCCGAATGGAGATAAAAGAAGAAATGGGGAAACCATATTTCTATGTATTTGGTGACAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGGTAATTAAACCTAGACCCTAAAACCATGTTTTAATGTAATTATTATTTTAACCAAAAACATGTGAGAAGGTGTACTAAGTATTTGAACTAGATTGATACATTCTCAACATCCTAAATTTAAAAAAAAACTGAAAAGCATGTTTTATGTCAATATTTTTTTCATGAAAAAAATCAATCTCTTCCGTTTAACTTTGCATTCTTCTACTTATTTATATGTTGTGTCCAAATTAATATGATTCAGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGTAATGAAAATTTATTTTGAATTATTTGTATATGAAGTTATATTAATATATATATGTAGATATTACACTTAATGATTTTATGTTTCAGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA

mRNA sequence

ATGAAACAGGCAGATATATCTATGGCAGATTCTAGATCTGTGGTAAGACTTAGAAGAGCTGAAAAACCAGTCCATTATACTTTACAAATCAACTCATTTTCTTCGCTGAAGGCTGCTGTTGCTGCTTCCAATTGTGACAGATATGAATCACAGGTCTTCAATGTCGGAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA

Coding sequence (CDS)

ATGAAACAGGCAGATATATCTATGGCAGATTCTAGATCTGTGGTAAGACTTAGAAGAGCTGAAAAACCAGTCCATTATACTTTACAAATCAACTCATTTTCTTCGCTGAAGGCTGCTGTTGCTGCTTCCAATTGTGACAGATATGAATCACAGGTCTTCAATGTCGGAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA

Protein sequence

MKQADISMADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVGVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH*
Homology
BLAST of CsaV3_5G024430 vs. NCBI nr
Match: KAE8648446.1 (hypothetical protein Csa_009369 [Cucumis sativus])

HSP 1 Score: 442.2 bits (1136), Expect = 2.6e-120
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0

Query: 1   MKQADISMADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVGVEDE 60
           MKQADISMADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVGVEDE
Sbjct: 1   MKQADISMADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVGVEDE 60

Query: 61  ILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGF 120
           ILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGF
Sbjct: 61  ILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGF 120

Query: 121 LVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENY 180
           LVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENY
Sbjct: 121 LVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENY 180

Query: 181 RWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 220
           RWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH
Sbjct: 181 RWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 219

BLAST of CsaV3_5G024430 vs. NCBI nr
Match: XP_011656220.1 (uncharacterized protein LOC105435676 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 1.0e-92
Identity = 179/212 (84.43%), Postives = 180/212 (84.91%), Query Frame = 0

Query: 8   MADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVGVEDEILTTTLE 67
           MADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVG           
Sbjct: 1   MADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVG----------- 60

Query: 68  VNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCA 127
                                DGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCA
Sbjct: 61  ---------------------DGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCA 120

Query: 128 FGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLY 187
           FGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLY
Sbjct: 121 FGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLY 180

Query: 188 PNGYSQASSEYLSLFLALDSVEELPSRFSSVH 220
           PNGYSQASSEYLSLFLALDSVEELPSRFSSV+
Sbjct: 181 PNGYSQASSEYLSLFLALDSVEELPSRFSSVN 180

BLAST of CsaV3_5G024430 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 9.8e-59
Identity = 127/241 (52.70%), Postives = 156/241 (64.73%), Query Frame = 0

Query: 2   KQADISMADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNC-DRYESQVFNVG---- 61
           K +  +  +S  V+R  R EKP+HYTL+I SFS LKAAVAAS+  +RYESQ+F  G    
Sbjct: 14  KNSIFNNENSSLVIRTSRDEKPLHYTLKIQSFSLLKAAVAASSIRNRYESQIFKAGGYKW 73

Query: 62  ------------------------VEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKT 121
                                    EDEI ++ LE+ V    LVYD+L+D Y  + DGK 
Sbjct: 74  KLALYPNGDFKRNVANHISLYLVSAEDEISSSGLEIKVMIKFLVYDNLKDRYWTIQDGKV 133

Query: 122 KCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMK-FDGKGEILSSINQPE 181
           +CFHA+K EWGFE LVSLDTFN  SNG LVDD CAFGVDV +MK +DG  EILS I Q +
Sbjct: 134 RCFHAIKKEWGFEKLVSLDTFNDTSNGLLVDDCCAFGVDVIVMKSYDGNNEILSLIKQLK 193

Query: 182 NYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEEL 213
           NYK+TWK  +FSQL +N YES+ FTV+NY WKI LYP G S A + Y+S+FL  DS E+L
Sbjct: 194 NYKYTWKINNFSQLSKNVYESDPFTVDNYTWKIELYPRGDSLAMTGYMSMFLRFDSFEKL 253

BLAST of CsaV3_5G024430 vs. NCBI nr
Match: XP_022146383.1 (uncharacterized protein LOC111015611 [Momordica charantia])

HSP 1 Score: 228.0 bits (580), Expect = 7.8e-56
Identity = 123/234 (52.56%), Postives = 148/234 (63.25%), Query Frame = 0

Query: 9   ADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFN-------------- 68
           A+S  V+R  R EKP+HYTL+I SFS LK A+A+S  DR+ SQ+F+              
Sbjct: 28  AESPLVLRSIRDEKPLHYTLKIKSFSLLKKALASSKRDRFVSQIFHASGYKWKLALYPNG 87

Query: 69  --------------VGVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKT 128
                         V  EDEI++ T EVNV  T LVYDSL D+YLA+ DGK K FH MKT
Sbjct: 88  DKNRNGSGYISLYLVTAEDEIVSATSEVNVVLTFLVYDSLRDKYLAIQDGKVKRFHRMKT 147

Query: 129 EWGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFD--GKGEILSSINQPENYKFTWK 188
           EWGFE L+S D FN PSNGFLV  Y AFGVD+F++K D  GKGEILS IN PE+YKFTWK
Sbjct: 148 EWGFEKLISFDIFNNPSNGFLVGGYAAFGVDIFVIKSDDGGKGEILSLINPPEHYKFTWK 207

Query: 189 FKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 213
              FS  +     S+ F+VE Y W++ L+PNG   A S YLSLFL  D + ELP
Sbjct: 208 INHFS-TQSKTLSSDVFSVEGYHWRVELHPNGCPTAMSNYLSLFLIFDDLRELP 260

BLAST of CsaV3_5G024430 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 7.8e-56
Identity = 123/232 (53.02%), Postives = 148/232 (63.79%), Query Frame = 0

Query: 10  DSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVG------------- 69
           +S SVV   R EKPVHYTL+I SFS LK  +A+S   R+ESQ FN G             
Sbjct: 21  NSSSVVMSTRHEKPVHYTLKIQSFSLLKNGLASSQRQRFESQKFNAGCYEWKLALYPNGD 80

Query: 70  ---------------VEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTE 129
                          V + IL+TT EVNV FT LVYD+L  +YL V DGK + F AMKTE
Sbjct: 81  ERRNVSNHISLYLVIVGNNILSTTSEVNVVFTFLVYDTLRGKYLTVQDGKMRRFSAMKTE 140

Query: 130 WGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFD-GKGEILSSINQPENYKFTWKFK 189
           WG E L+ LDTFN  SNGFLVDD C FGVD+F+M  D G GE+ S I QP+NY++TWK  
Sbjct: 141 WGIEKLLPLDTFNDASNGFLVDDCCVFGVDIFVMSCDGGMGEVFSLIKQPKNYEYTWKLN 200

Query: 190 DFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 213
           +FSQL     ESN FTVE+YRWKI LYP+G S+A S +LS++L  DS  +LP
Sbjct: 201 NFSQLGSTLKESNPFTVESYRWKILLYPSGCSKAKSGFLSMYLLFDSSNQLP 252

BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 6.5e-05
Identity = 22/65 (33.85%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 148 NQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDS 207
           +Q +  KF+W  K+FS L+  +  S+ F ++  RW++  +P G +   S++LSL+L +  
Sbjct: 4   DQADKKKFSWVIKNFSSLQSEKIYSDQFVIDGCRWRLLAFPKG-NDTKSDHLSLYLDVAE 63

Query: 208 VEELP 213
            E LP
Sbjct: 64  SESLP 67

BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9M2H5 (MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN=At3g58410 PE=4 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0

Query: 154 KFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPS 213
           KF W  K+FS L+  ++ S  F + + +W++S+YP G    + +YLSLFL +   + LPS
Sbjct: 8   KFAWVIKNFSSLQCKKFYSVPFQIGDCKWRLSIYPKG---NNCDYLSLFLEVADFKSLPS 64

BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9C869 (MATH domain and coiled-coil domain-containing protein At1g31400 OS=Arabidopsis thaliana OX=3702 GN=At1g31400 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04
Identity = 21/60 (35.00%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 154 KFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPS 213
           + TW  K+FS L+ +    + F V + +W +  YP GY  + ++ LSLFL +   ++LPS
Sbjct: 8   RITWTIKNFSSLQSHAIYFDIFVVGDTKWHLLAYPKGYGDSINKCLSLFLGVPDPDDLPS 67

BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9M2J5 (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0

Query: 154 KFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPS 213
           KFTW  ++FS  +     SN F +   +W++ +YP G+++ S ++LSLFL +     LP 
Sbjct: 8   KFTWVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNK-SGDHLSLFLEVADPRSLPP 67

Query: 214 RFS 217
            +S
Sbjct: 68  GWS 69

BLAST of CsaV3_5G024430 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 7.2e-04
Identity = 21/67 (31.34%), Postives = 37/67 (55.22%), Query Frame = 0

Query: 150 PENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVE 209
           P   KFTW   +FS+    ++ S+ F V  Y+W+I ++P G    + ++LS++L +    
Sbjct: 52  PPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVSDAA 111

Query: 210 ELPSRFS 217
            LP  +S
Sbjct: 112 SLPYGWS 115

BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A0A0KRR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432540 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.4e-89
Identity = 164/168 (97.62%), Postives = 166/168 (98.81%), Query Frame = 0

Query: 52  VFNVGVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 111
           ++ V VEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD
Sbjct: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60

Query: 112 TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE 171
           TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE
Sbjct: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE 120

Query: 172 SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 220
           SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH
Sbjct: 121 SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 168

BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.8e-56
Identity = 123/234 (52.56%), Postives = 148/234 (63.25%), Query Frame = 0

Query: 9   ADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFN-------------- 68
           A+S  V+R  R EKP+HYTL+I SFS LK A+A+S  DR+ SQ+F+              
Sbjct: 28  AESPLVLRSIRDEKPLHYTLKIKSFSLLKKALASSKRDRFVSQIFHASGYKWKLALYPNG 87

Query: 69  --------------VGVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKT 128
                         V  EDEI++ T EVNV  T LVYDSL D+YLA+ DGK K FH MKT
Sbjct: 88  DKNRNGSGYISLYLVTAEDEIVSATSEVNVVLTFLVYDSLRDKYLAIQDGKVKRFHRMKT 147

Query: 129 EWGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFD--GKGEILSSINQPENYKFTWK 188
           EWGFE L+S D FN PSNGFLV  Y AFGVD+F++K D  GKGEILS IN PE+YKFTWK
Sbjct: 148 EWGFEKLISFDIFNNPSNGFLVGGYAAFGVDIFVIKSDDGGKGEILSLINPPEHYKFTWK 207

Query: 189 FKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 213
              FS  +     S+ F+VE Y W++ L+PNG   A S YLSLFL  D + ELP
Sbjct: 208 INHFS-TQSKTLSSDVFSVEGYHWRVELHPNGCPTAMSNYLSLFLIFDDLRELP 260

BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 4.6e-54
Identity = 124/234 (52.99%), Postives = 149/234 (63.68%), Query Frame = 0

Query: 7   SMADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVG---------- 66
           S ADS SV+R  R EKP+HYTLQI  FS LK A+A S+ DRYES +F+V           
Sbjct: 46  SQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYP 105

Query: 67  ------------------VEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAM 126
                              ED+I   TL++ V FT+LVYD+L D YLAV DGK + FHAM
Sbjct: 106 SGDVKRNGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAM 165

Query: 127 KTEWGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWK 186
           K EWGFE LVSL+TFN  SNGFLVDD CAFGVD+F+MK DGKGE LS I QP+N K+TWK
Sbjct: 166 KKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCDGKGEALSLIKQPKNNKYTWK 225

Query: 187 FKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 213
             +FSQL +N              K+SLYP G  +AS +YLSLFL  +S++ELP
Sbjct: 226 TNNFSQLDEN-------------MKMSLYPKGSPKASPDYLSLFLRCESLKELP 264

BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 111/204 (54.41%), Postives = 142/204 (69.61%), Query Frame = 0

Query: 14  VVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVGVEDEILTTTLEVNVFFT 73
           V+R  R EKP+HYTLQI SFS LKAA+A+SN DRYESQ+FN G     L      +V   
Sbjct: 8   VIRSTRDEKPLHYTLQIQSFSLLKAALASSNRDRYESQIFNAGGYKWKLAVYPNGDVKRN 67

Query: 74  LLVYDSL-----EDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCAF 133
              + SL     +D+      GK + FHAMK EWGFE L+SLDTFN  SNGF+V D C F
Sbjct: 68  GADHISLYLVKADDDINPCSHGKVRRFHAMKAEWGFEKLISLDTFNDSSNGFVVGDCCGF 127

Query: 134 GVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYP 193
           GVDV +MK DGKGE++S I +P+++K+TWK K+FSQL +  YES+ FTVE YRWK+ LYP
Sbjct: 128 GVDVVVMKCDGKGEVVSFIKEPKSHKYTWKTKNFSQLDKKFYESDPFTVEGYRWKLWLYP 187

Query: 194 NGYSQASSEYLSLFLALDSVEELP 213
            G S+A + +LSL+L+ +S EE+P
Sbjct: 188 KGSSKAKTGFLSLYLSYNSYEEIP 211

BLAST of CsaV3_5G024430 vs. ExPASy TrEMBL
Match: A0A0A0KND8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.9e-50
Identity = 114/231 (49.35%), Postives = 138/231 (59.74%), Query Frame = 0

Query: 11  SRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVG-------------- 70
           S SVV   R EKPVHY L+I SFS LK  +A S   R+ESQ FN G              
Sbjct: 25  SASVVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRFESQKFNAGGYEWKLALYPNGDQ 84

Query: 71  --------------VEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEW 130
                         V D IL+TT EVN  FT LVYD+L  +YL V DGK + F A KTEW
Sbjct: 85  RRDVSDHISLYLVMVGDNILSTTSEVNAVFTFLVYDTLRGKYLTVQDGKMRRFSATKTEW 144

Query: 131 GFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFD-GKGEILSSINQPENYKFTWKFKD 190
           G E L+ L+TF   SNGFLVDD C FGVD+F+M  D GKGE+ S I QP NYK+TWK  +
Sbjct: 145 GIEKLLPLNTFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQPNNYKYTWKLNN 204

Query: 191 FSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 213
           FS+L  +  E N FTVEN  WKI L+P+G  QA   + S++L L +++E P
Sbjct: 205 FSKLDSSLRECNPFTVENCCWKIRLFPSGDLQAKPGFFSMYLMLTNLKEFP 255

BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT2G15710.1 (TRAF-like family protein )

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-23
Identity = 68/229 (29.69%), Postives = 107/229 (46.72%), Query Frame = 0

Query: 13  SVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVGVEDEIL---------- 72
           ++V   R   P  Y+L+IN  S L         D+YES  F  G  +  L          
Sbjct: 88  TIVNNLREHPPSSYSLKINKLSQL-------TFDKYESHRFLSGGYNWRLVIYPKGNEKD 147

Query: 73  -------------------TTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWG 132
                              T+ +EV  +    VY+  E++Y  + D + K F+A++T WG
Sbjct: 148 KGSGFISMYVEFDNTKVSSTSPMEVFAYIIFFVYNKKENKYFTIQDVEVKRFNALRTVWG 207

Query: 133 FENLVSLDTFNVPSNGFLVD-DYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDF 192
              ++SL+TFN   NG+  + + C FGVDV +     K E++S   + +  KF+W  KDF
Sbjct: 208 LSQVLSLETFNDLENGYTFEGEQCEFGVDVMVASPITKWEVVSFDEKLDILKFSWSVKDF 267

Query: 193 SQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEEL 212
           S L++  Y S  F++    W + +YP G  +   ++LS+FL L   E L
Sbjct: 268 SVLKEEFYVSERFSMGGRLWDLQMYPKGDPRRDKKWLSIFLRLSGSETL 309

BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT1G69660.1 (TRAF-like family protein )

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-22
Identity = 53/139 (38.13%), Postives = 80/139 (57.55%), Query Frame = 0

Query: 76  VYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVD-DYCAFGVDVFI 135
           VY+  E++Y  + D + K F+A++  WG   ++S DTF  P NGF+ +   C FGVDV +
Sbjct: 17  VYNKKENKYFTIQDVEVKRFNALRMVWGLLKVLSYDTFTNPENGFIFEGGECEFGVDVLV 76

Query: 136 MKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQA 195
                  EILS   +    KF+W  K+FS+L+++ Y SN + +    W + LYP G S+A
Sbjct: 77  APPLTNWEILSFDEKLSPPKFSWNLKNFSELKEDVYTSNKYPMGGKEWVLKLYPKGNSRA 136

Query: 196 SSEYLSLFLALDSVEELPS 214
             +YLSL++ L   E L S
Sbjct: 137 DGKYLSLYVHLADSETLKS 155

BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT3G22080.1 (TRAF-like family protein )

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-22
Identity = 66/231 (28.57%), Postives = 110/231 (47.62%), Query Frame = 0

Query: 11  SRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVG-------------- 70
           S + +R  R   P  Y+L++ + S ++ +   S+  +Y+S++F+ G              
Sbjct: 341 SSTTLRSWRERTPNSYSLKLQNISQVEKSTLFSD-GKYQSRLFSSGGYNWRMIIYPKGNR 400

Query: 71  -------------VEDEILTTTLEVNVFFTL--LVYDSLEDEYLAVHDGKTKCFHAMKTE 130
                        ++   L TT    VF  L   V++  E++Y  +   ++K F+A +T 
Sbjct: 401 KDDGSGFISMYVEIDSTSLLTTPTTEVFADLRFFVFNKKENKYYTIQHVESKLFNAFRTI 460

Query: 131 WGFENLVSLDTFNVPSNGFLVD-DYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFK 190
           WG   ++ +DTF  P NG++ + D C FGVDV +       EI +        KF W  K
Sbjct: 461 WGLAQVLPVDTFTDPKNGYIFEGDQCEFGVDVIVAAPPTNWEIHTLHEALSQPKFFWTVK 520

Query: 191 DFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEEL 212
           +FS+L  N Y S  F++   +W + LYP G  +   ++LSL+L LD  E L
Sbjct: 521 NFSELNNNVYTSGNFSMRERKWVLKLYPKGDVKGDRKWLSLYLYLDQSETL 570

BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT5G26280.2 (TRAF-like family protein )

HSP 1 Score: 102.1 bits (253), Expect = 6.0e-22
Identity = 68/202 (33.66%), Postives = 96/202 (47.52%), Query Frame = 0

Query: 7   SMADSRSVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVG-----VEDEI 66
           S+ ++  V R  R E+P    + I SFS +K        + YES VF         E   
Sbjct: 43  SLEENLGVTRELREERPSSKIVTITSFSVIK-----GRGEPYESSVFEAAGYKWIEETNS 102

Query: 67  LTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFL 126
           L    EVNV   L V++    +YL V DG  K ++  K EWGF  L+   TF   + G+L
Sbjct: 103 LPLGWEVNVDLKLFVHNGKLHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEGYL 162

Query: 127 VDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYR 186
             D  +FG ++FI+K   + E ++ I+ P N  FTWK   FS L    Y S+ F VE+  
Sbjct: 163 DQDTGSFGAEIFIVKPAQQQEKVTFISNPPNNVFTWKILRFSTLEDKFYYSDDFLVEDRY 222

Query: 187 WKISLYPNGYSQASSEYLSLFL 204
           W++   P G        L +FL
Sbjct: 223 WRLGFNPKGDGGGRPHALPIFL 239

BLAST of CsaV3_5G024430 vs. TAIR 10
Match: AT3G20360.1 (TRAF-like family protein )

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-21
Identity = 74/242 (30.58%), Postives = 114/242 (47.11%), Query Frame = 0

Query: 6   ISMADSR----SVVRLRRAEKPVHYTLQINSFSSLKAAVAASNCDRYESQVFNVG----- 65
           IS  DS+    S V+  R   P  Y+L++ SF++L  +V     +RYES+ F VG     
Sbjct: 45  ISSRDSKVSLSSTVKGLRERPPSSYSLKMESFNTLMKSVYT---ERYESRPFRVGRYNWT 104

Query: 66  ----------------------VEDEILTT-TLEVNVFFTLLVYDSLEDEYLAVHDGKTK 125
                                 +++  LT+ + EV+V     V++  E +Y  + D    
Sbjct: 105 LVVYPKGNKNDNGTGHISLYVVLDNSTLTSQSEEVHVDLRFYVFNKKETKYFTIQDTDVW 164

Query: 126 CFHAMKTEWGFENLVSLDTFNVPSNGFLVD-DYCAFGVDVFIMKFDGKGEILSSINQPEN 185
            F A+K  WGF  ++ L TFN   NG+L D D+C FGVDV I  F  K E+ S      +
Sbjct: 165 RFSAIKRMWGFSKVLPLITFNNLKNGYLYDVDHCEFGVDVIIPPFYEKSEVFSVTKSFPS 224

Query: 186 YKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 215
            +FTW  + +S L  + Y S  F +    W + ++ NG+     + LSL+L L   E L 
Sbjct: 225 PRFTWYIQGYSTLPTD-YLSEEFIIGGKSWNLRIFKNGFGAFEGKNLSLYLNLGPQELLK 282

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8648446.12.6e-120100.00hypothetical protein Csa_009369 [Cucumis sativus][more]
XP_011656220.11.0e-9284.43uncharacterized protein LOC105435676 [Cucumis sativus][more]
XP_038874970.19.8e-5952.70uncharacterized protein LOC120067490 [Benincasa hispida][more]
XP_022146383.17.8e-5652.56uncharacterized protein LOC111015611 [Momordica charantia][more]
XP_038875772.17.8e-5653.02uncharacterized protein LOC120068142 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9M2J16.5e-0533.85MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis t... [more]
Q9M2H51.1e-0438.33MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis t... [more]
Q9C8691.5e-0435.00MATH domain and coiled-coil domain-containing protein At1g31400 OS=Arabidopsis t... [more]
Q9M2J53.2e-0434.92MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis t... [more]
Q9FPT17.2e-0431.34Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A0A0KRR83.4e-8997.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432540 PE=4 SV=1[more]
A0A6J1CYF63.8e-5652.56uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1CZF74.6e-5452.99uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1CX471.3e-5154.41probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX... [more]
A0A0A0KND86.9e-5049.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G15710.14.2e-2329.69TRAF-like family protein [more]
AT1G69660.12.1e-2238.13TRAF-like family protein [more]
AT3G22080.14.6e-2228.57TRAF-like family protein [more]
AT5G26280.26.0e-2233.66TRAF-like family protein [more]
AT3G20360.13.0e-2130.58TRAF-like family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 57..142
e-value: 1.8E-14
score: 55.8
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 143..218
e-value: 1.3E-16
score: 62.7
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 60..134
e-value: 0.018
score: 15.2
coord: 159..212
e-value: 3.3E-4
score: 20.8
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 152..219
score: 20.339804
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 154..213
e-value: 1.22254E-12
score: 60.4706
NoneNo IPR availablePANTHERPTHR46162:SF40UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12-LIKEcoord: 18..214
NoneNo IPR availablePANTHERPTHR46162TRAF-LIKE FAMILY PROTEINcoord: 18..214
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 24..137
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 150..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G024430.1CsaV3_5G024430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding