CsaV3_5G024080 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G024080
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Locationchr5: 18756625 .. 18758764 (-)
RNA-Seq ExpressionCsaV3_5G024080
SyntenyCsaV3_5G024080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTTGTTTTTCTGCTCTTACTCAGGACCTCTCCGTCGGACCCAACTGCAGCTCCACATTTTTCAGATACACCTTCGAACATATGTAGATGGCACAATTAATTGGGTGCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTCCTCCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCATCCAAGTCTGTTCCACTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAACGCGTCCTATTGATTTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGAATTCAACCTCATGTCAAGCTGACCTCTAAAGTTCTTGAACTTGATGCTGAAGAACAGCTAACATATCAAACTTCAACTTGTAGACAACAAGCTGCGGATCGACTTGTGAAACTCTTAATGTTATCAAGAGTTCATAAAGTACCTGTAAGTATCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTGAAAGTATAGTTCCTGATTTTCCAGATTACTTCAAAGTTGTAGGACATCAAAATTTTGCGTCTGGATCAGGTGATATGCGGGTATTGGAATTGGTTTGTTGGAACAATGAATTGGCCACTTCAGTTATAGAGAAGATGGCTGTAAAAGTAAAGCCTGATAAATCTAAAGGAATGTATATTACTTTTCCTATGAAATACTCGAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATTTCTCCCTACGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGACAAGTGGACTGTTGCAATTTTACACGAGCTTCTTCATATGCTTGTCACGAAGAAGACTGAGAAGGAAAATATATTGTGTATAGGCGAGTATTTTGGTCTACGGTCGAGGTTTAAGAGAGCCTTGCTTCACCATCCTGGGATATTCTACATATCAAGTAAGGCTGGAACCTACACGGTTGTCTTGAAAGAGGGGTATAAAAGAGGTTCTGTGGTTGAGAGTAATCCTTTGATGAACATTAGAAACAAGTATCTTCATCTTATGAACACAGTGGAGGAAGACAGTAAAACAACAACCAAGCATATTGATACTCGCCAACAGAAGCAAGAACAGAAAGAAGAGTCAAATCATGCACCTGGAGAACAGAATGAAGCTGAATTACTCAACTCCTCAGATGATGAAGATGAAGATGAAAATACTTCTAGTCATCGTAATGTTTGTGCTGATCAGAGAGACAACATCCGCGGTGACCGGCGAGGCAACGTCCGTTGTGACCGGAGAGGCAACGTCCGTGGTGACCGGAGGGACAACGTCCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACGTGCGTGGTGAACGGAGGGACAACGTGCGTGGTGAACGGAGGGACAACGTGCGTGGTGAACGGAGGGACAACGTCCGTGGTGAACGGAGGGACCATGTCCGTGCTGACCGGAGAGATCATGTCCGTGCTCACTCTATTTGACTTTCGCTTTTGCATGATCCTTTTGCTTATGCTTATTTTGAAACCTATTAGACCCTTTTTGTTCAATAGATTTACACTTTTTGATTTCGCTATTGGTGGTTTATTACTATGGGTTTTCTTCTATAACGGGGCATTGGATTTATTTTTCTTTCTTAGTCATCATGACTTGTACATAAGAGTATCAGATGGGTTTTGTTTGGAAAGAACAGAATTCAGTTGAATGCCCGATGAAGATGTAAAACATCTTCCTTAACCGTTTTATTTTCACTGTTTCTTTGTTCTATTAACTGCATTTTTGCAACTTATTTTAAGGACTTGTGAAGGAAATTGCAATCTTTCATGGATTTTGCCTGTTTTGTAATTTTTGTTTTCAATGACTGTCTAACTGTGAAGAAATTTGAGTAATCTGTTACTGATACTAAGTTCTCTCAGGAATCTCTAAACTGCATGATGCTTTTTATCTAATTATCAGGTTAAAATGTCTTGA

mRNA sequence

ATGTTTTTGTTTTTCTGCTCTTACTCAGGACCTCTCCGTCGGACCCAACTGCAGCTCCACATTTTTCAGATACACCTTCGAACATATGTAGATGGCACAATTAATTGGGTGCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTCCTCCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCATCCAAGTCTGTTCCACTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAACGCGTCCTATTGATTTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGAATTCAACCTCATGTCAAGCTGACCTCTAAAGTTCTTGAACTTGATGCTGAAGAACAGCTAACATATCAAACTTCAACTTGTAGACAACAAGCTGCGGATCGACTTGTGAAACTCTTAATGTTATCAAGAGTTCATAAAGTACCTGTAAGTATCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTGAAAGTATAGTTCCTGATTTTCCAGATTACTTCAAAGTTGTAGGACATCAAAATTTTGCGTCTGGATCAGGTGATATGCGGGTATTGGAATTGGTTTGTTGGAACAATGAATTGGCCACTTCAGTTATAGAGAAGATGGCTGTAAAAGTAAAGCCTGATAAATCTAAAGGAATGTATATTACTTTTCCTATGAAATACTCGAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATTTCTCCCTACGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGACAAGTGGACTGTTGCAATTTTACACGAGCTTCTTCATATGCTTGTCACGAAGAAGACTGAGAAGGAAAATATATTGTGTATAGGCGAGTATTTTGGTCTACGGTCGAGGTTTAAGAGAGCCTTGCTTCACCATCCTGGGATATTCTACATATCAAGTAAGGCTGGAACCTACACGGTTGTCTTGAAAGAGGGGTATAAAAGAGGTTCTGTGGTTGAGAGTAATCCTTTGATGAACATTAGAAACAAGTATCTTCATCTTATGAACACAGTGGAGGAAGACAGTAAAACAACAACCAAGCATATTGATACTCGCCAACAGAAGCAAGAACAGAAAGAAGAGTCAAATCATGCACCTGGAGAACAGAATGAAGCTGAATTACTCAACTCCTCAGATGATGAAGATGAAGATGAAAATACTTCTAGTCATCGTAATGTTTGTGCTGATCAGAGAGACAACATCCGCGGTGACCGGCGAGGCAACGTCCGTTGTGACCGGAGAGGCAACGTCCGTGGTGACCGGAGGGACAACGTCCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACAGATCATGTTA

Coding sequence (CDS)

ATGTTTTTGTTTTTCTGCTCTTACTCAGGACCTCTCCGTCGGACCCAACTGCAGCTCCACATTTTTCAGATACACCTTCGAACATATGTAGATGGCACAATTAATTGGGTGCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTCCTCCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCATCCAAGTCTGTTCCACTTTCCATCATAACTCAGAAAAGGGAAATTCTAAGAATTCCAACGCGTCCTATTGATTTGATCAGAAAATATCCTTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGAATTCAACCTCATGTCAAGCTGACCTCTAAAGTTCTTGAACTTGATGCTGAAGAACAGCTAACATATCAAACTTCAACTTGTAGACAACAAGCTGCGGATCGACTTGTGAAACTCTTAATGTTATCAAGAGTTCATAAAGTACCTGTAAGTATCATTGATCAATTGAAATGGGACTTGGGTCTTCCTAAAGATTATGTTGAAAGTATAGTTCCTGATTTTCCAGATTACTTCAAAGTTGTAGGACATCAAAATTTTGCGTCTGGATCAGGTGATATGCGGGTATTGGAATTGGTTTGTTGGAACAATGAATTGGCCACTTCAGTTATAGAGAAGATGGCTGTAAAAGTAAAGCCTGATAAATCTAAAGGAATGTATATTACTTTTCCTATGAAATACTCGAACGGTTTTGAGATGGATAAGAAGTTCAAGAAATGGGTGGATGAGTGGCAAAAGCTACCTTACATTTCTCCCTACGAAAATGCATCACATCTTTCTCCTAACAGTGATGAATCTGACAAGTGGACTGTTGCAATTTTACACGAGCTTCTTCATATGCTTGTCACGAAGAAGACTGAGAAGGAAAATATATTGTGTATAGGCGAGTATTTTGGTCTACGGTCGAGGTTTAAGAGAGCCTTGCTTCACCATCCTGGGATATTCTACATATCAAGTAAGGCTGGAACCTACACGGTTGTCTTGAAAGAGGGGTATAAAAGAGGTTCTGTGGTTGAGAGTAATCCTTTGATGAACATTAGAAACAAGTATCTTCATCTTATGAACACAGTGGAGGAAGACAGTAAAACAACAACCAAGCATATTGATACTCGCCAACAGAAGCAAGAACAGAAAGAAGAGTCAAATCATGCACCTGGAGAACAGAATGAAGCTGAATTACTCAACTCCTCAGATGATGAAGATGAAGATGAAAATACTTCTAGTCATCGTAATGTTTGTGCTGATCAGAGAGACAACATCCGCGGTGACCGGCGAGGCAACGTCCGTTGTGACCGGAGAGGCAACGTCCGTGGTGACCGGAGGGACAACGTCCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACGTGCGTGGTGACCGGAGGGACAACAGATCATGTTA

Protein sequence

MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGDRRDNRSCX
Homology
BLAST of CsaV3_5G024080 vs. NCBI nr
Match: KAE8648432.1 (hypothetical protein Csa_023661 [Cucumis sativus])

HSP 1 Score: 953.4 bits (2463), Expect = 7.7e-274
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTS 420
           NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTS
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTS 420

Query: 421 SHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGDRRDN 480
           SHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGDRRDN
Sbjct: 421 SHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGDRRDN 480

Query: 481 RSC 484
           RSC
Sbjct: 481 RSC 483

BLAST of CsaV3_5G024080 vs. NCBI nr
Match: XP_031741647.1 (protein WHAT'S THIS FACTOR 9, mitochondrial, partial [Cucumis sativus])

HSP 1 Score: 931.0 bits (2405), Expect = 4.1e-267
Identity = 473/474 (99.79%), Postives = 473/474 (99.79%), Query Frame = 0

Query: 7   SYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 66
           S SGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP
Sbjct: 48  SASGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEP 107

Query: 67  SKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEE 126
           SKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEE
Sbjct: 108 SKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEE 167

Query: 127 QLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 186
           QLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFK
Sbjct: 168 QLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFK 227

Query: 187 VVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEM 246
           VVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEM
Sbjct: 228 VVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEM 287

Query: 247 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 306
           DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC
Sbjct: 288 DKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILC 347

Query: 307 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 366
           IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL
Sbjct: 348 IGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHL 407

Query: 367 MNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTSSHRNVC 426
           MNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTSSHRNVC
Sbjct: 408 MNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTSSHRNVC 467

Query: 427 ADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGDRRDN 481
           ADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGDRRDN
Sbjct: 468 ADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGDRRDN 521

BLAST of CsaV3_5G024080 vs. NCBI nr
Match: XP_016900350.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 828.2 bits (2138), Expect = 3.7e-236
Identity = 435/487 (89.32%), Postives = 448/487 (91.99%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPL RTQ QLHI QIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRL+KLLMLSRVHKVPVSIIDQLKWDLGLPKD+V+SIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVG QNFASGSGDMRVLELVCWNNELATSV+EKMA KVK D SK M ITFPMKY
Sbjct: 181 FPDYFKVVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEE----SNHAPGEQNEAELLNSSD----D 420
           NKYLHLMNTVEEDSKTTTKHI TRQQKQEQK+E    S+ A G QNEAELLNSSD    D
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDN 480
           EDEDENTSS   V AD RDN+R D R NVR DRR +V  DRRD+VR DRRD+VR DRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADLRDNVRADRRDHVCADRRDHVRADRRDHVRADRRDQ 480

BLAST of CsaV3_5G024080 vs. NCBI nr
Match: TYK12080.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 826.6 bits (2134), Expect = 1.1e-235
Identity = 433/488 (88.73%), Postives = 448/488 (91.80%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPL RTQ QLHI QIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRL+KLLMLSRVHKVPVSIIDQLKWDLGLPKD+V+SIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSV+EKMA KVK D SK M+ITFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEE----SNHAPGEQNEAELLNSSD----D 420
           NKYLHLMNTVEEDSKTT KHI TRQQKQEQK+E    S+ A G QNEAELLNSSD    D
Sbjct: 361 NKYLHLMNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDN 480
           EDEDENTSS   V AD RDN+R D R  VR DRR +VR DR D VR DR D+VR DRRD+
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADPRDQVRADRRDHVRADRGDQVRADRGDHVRADRRDH 480

BLAST of CsaV3_5G024080 vs. NCBI nr
Match: KAA0056510.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 826.6 bits (2134), Expect = 1.1e-235
Identity = 433/488 (88.73%), Postives = 448/488 (91.80%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPL RTQ QLHI QIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRL+KLLMLSRVHKVPVSIIDQLKWDLGLPKD+V+SIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSV+EKMA KVK D SK M+ITFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEE----SNHAPGEQNEAELLNSSD----D 420
           NKYLHLMNTVEEDSKTT KHI TRQQKQEQK+E    S+ A G QNEAELLNSSD    D
Sbjct: 361 NKYLHLMNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDN 480
           EDEDENTSS   V AD RDN+R D R  VR DRR +VR DR D VR DR D+VR DRRD+
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADPRDQVRADRRDHVRADRGDQVRADRGDHVRADRRDH 480

BLAST of CsaV3_5G024080 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-56
Identity = 125/347 (36.02%), Postives = 201/347 (57.93%), Query Frame = 0

Query: 27  RTYVDGTINWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRI 86
           RTYVD  + W RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     +
Sbjct: 22  RTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV 81

Query: 87  PTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLV 146
            T+    +RK+PSIFEEF+     + P  +LT +  ELD +E++ YQTS       DRL 
Sbjct: 82  STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVYQTSA--DDLRDRLK 141

Query: 147 KLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLE 206
           KL+++S+ + +P+SI+  +KW LGLP DY++     FPD   +     F      ++ L 
Sbjct: 142 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQ-----FPD-MNLDSSFRFVDMEDGVKGLA 201

Query: 207 LVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEMDKKFKKWVDEWQKLPYIS 266
           +     +   SV++K A+K +  +     I FP+  S G  +  K + W+ E+QKLPY+S
Sbjct: 202 VDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVS 261

Query: 267 PYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHH 326
           PY++ S L P+SD ++K  V  LHELL + V    E++ +LC+ ++FGL  +  +A   H
Sbjct: 262 PYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERH 321

Query: 327 PGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVE 372
           P IFY+S K  T T +L+E Y+  + VE++P++ +R KY+ LM   E
Sbjct: 322 PQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSE 359

BLAST of CsaV3_5G024080 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-31
Identity = 100/347 (28.82%), Postives = 173/347 (49.86%), Query Frame = 0

Query: 37  VRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPTR---PIDLIR 96
           VRD G D+ +E EK +  V+     I S+P+ ++ +S++      L +  +   P   + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 97  KYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAAD---RLVKLLMLS 156
           K+P +FE      I   P  ++    L   A +Q+ ++      Q  D   RL KL+M+S
Sbjct: 107 KFPHVFE------IYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMS 166

Query: 157 RVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLELVCWNN 216
              ++ +  +   + + GLP+D+  S++   P +F+++  +         + +E+V  + 
Sbjct: 167 NTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRD-----KYIEIVEKDP 226

Query: 217 ELATSVIEK---MAVKVKPDKSKGMYITFPMKYSNGFEMDKKFKKWVDEWQKLPYISPYE 276
            L+   IE+   +  + K   ++ +  +F + +  GF++ K F+  V +WQ+LPY SPYE
Sbjct: 227 NLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYE 286

Query: 277 NASHLSPNSDES----DKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLH 336
           + S     S E+    +K +VA +HELL + V KK   E I        L  + K  LL 
Sbjct: 287 DISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQ 346

Query: 337 HPGIFYISSKAG---TYTVVLKEGYKRGSVVESNPLMNIRNKYLHLM 368
           H GIFYIS++      +TV L+EGYKRG +VE N +   R +   L+
Sbjct: 347 HQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

BLAST of CsaV3_5G024080 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.3e-29
Identity = 112/423 (26.48%), Postives = 197/423 (46.57%), Query Frame = 0

Query: 43  DHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPTRP--IDLIRKYPSIFE 102
           D  V+R+K L  V+NI+  + S+P + + L  + + R  L +  R   I L+RKYP +FE
Sbjct: 85  DSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFE 144

Query: 103 EFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLV----KLLMLSRVHKVP 162
               G   ++   K+TS+       E+L       R +  D LV    KL+M+S   ++ 
Sbjct: 145 IVEEGAYSLR--FKMTSEA------ERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRIL 204

Query: 163 VSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSV 222
           +  I  LK DLGLP ++ ++I   +P YF+VV      +       LEL  W+ ELA S 
Sbjct: 205 LEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPA-------LELTHWDPELAVSA 264

Query: 223 IE--KMAVKVKPDKSKGMYITFPMKYS-----NGFEMDKKFKKWVDEWQKLPYISPYENA 282
            E  +   + +  + + + I  P K++      G  + K   + + +++ + YISPY++ 
Sbjct: 265 AELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 324

Query: 283 SHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHHPGIFY 342
           SHL   + E +K    ++HELL +   K+T  +++    E F    + +  L+ HP +FY
Sbjct: 325 SHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFY 384

Query: 343 ISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNT--------VEEDSKTTTKHI 402
           +S K    +V L+E Y+   +++ +PL  ++ K   L++           +D +     I
Sbjct: 385 VSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEI 444

Query: 403 DTRQQKQEQKEESNHA-----------------------PGEQNEAELLNSSDDEDEDEN 422
           D      E++EE + A                         ++ E ++  + DD+DEDE 
Sbjct: 445 DGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEEDVPPNFDDDDEDEE 492

BLAST of CsaV3_5G024080 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.9e-29
Identity = 104/397 (26.20%), Postives = 195/397 (49.12%), Query Frame = 0

Query: 43  DHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRI--PTRPIDLIRKYPSIFE 102
           D+ ++R+K L  V+ +++ + S P + + L  + + R  L +    R I L++++P +FE
Sbjct: 70  DNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKRFPGVFE 129

Query: 103 EFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSII 162
               G   ++  +   ++ L LD      +  +     A  +L KLLM+S+  ++ +  I
Sbjct: 130 VVEEGVYSLRFRLTPAAERLYLDE----LHLKNESEGLAVTKLRKLLMMSQDKRILIEKI 189

Query: 163 DQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIE-- 222
             LK DLGLP ++ ++I   +P YF+VV       G G    LEL  W+ ELA S  E  
Sbjct: 190 AHLKNDLGLPPEFRDTICLRYPQYFRVV---QMDRGPG----LELTHWDPELAVSAAEVA 249

Query: 223 KMAVKVKPDKSKGMYITFPMKYS-----NGFEMDKKFKKWVDEWQKLPYISPYENASHLS 282
           +   + + ++ + + I  P+K++      G ++ +   + V +++++PYISPY + SHL 
Sbjct: 250 EEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLR 309

Query: 283 PNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHHPGIFYISSK 342
             S E +K    ++HE+L + + K+T  +++    E F      +  L+ HP +FY+S K
Sbjct: 310 SGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLK 369

Query: 343 AGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEE 402
               +V L+E YK   +VE + L+ ++ K   L+                R  ++     
Sbjct: 370 GDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAV-------------PRFPRRGVPAT 429

Query: 403 SNHAPGEQNEAELLNSSDD--EDEDENTSSHRNVCAD 429
           S  A      A++L+   D  +DEDE  S   ++ ++
Sbjct: 430 SEEADRTNGAAQMLSEGSDVEDDEDEGLSDMEDLISE 442

BLAST of CsaV3_5G024080 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.1e-28
Identity = 100/400 (25.00%), Postives = 197/400 (49.25%), Query Frame = 0

Query: 38  RDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRI--PTRPIDLIRKY 97
           ++   D  ++R+K L  V+ +++ + ++P + + L  + + R  L +    R I L+R++
Sbjct: 59  KEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRRF 118

Query: 98  PSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKV 157
           P +F+    G   ++  +   ++ L LD E +L  ++      A  +L KLLM+S+  ++
Sbjct: 119 PGVFDVVEEGVYSLRFRLTPAAERLYLD-ELRLRNESEGL---AVAKLRKLLMMSQEKRI 178

Query: 158 PVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLELVCWNNELATS 217
            +  +  LK DLGLP ++ +++   +P YF+VV      +       LEL  W+ ELA S
Sbjct: 179 LIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPA-------LELTHWDPELAVS 238

Query: 218 VIE--KMAVKVKPDKSKGMYITFPMKYS-----NGFEMDKKFKKWVDEWQKLPYISPYEN 277
             E  +   + +  + + + I  P+K++      G ++ +   + +  ++++PYISPY +
Sbjct: 239 AAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYAD 298

Query: 278 ASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHHPGIF 337
            SHL   SDE +K    ++HE+L + V K+T  +++    E F      +  ++ HP +F
Sbjct: 299 FSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMF 358

Query: 338 YISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVEEDSKTTTKHIDTRQQKQ 397
           Y+S K    +V L+E YK   +VE N L+ ++ K   L+                R+   
Sbjct: 359 YVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPR----------FPRRAAV 418

Query: 398 EQKEESNHAPGEQNEAELLNSSDDEDEDENTSSHRNVCAD 429
              EE+    G     + ++  + +DEDE  S   ++ ++
Sbjct: 419 GTGEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISE 437

BLAST of CsaV3_5G024080 vs. ExPASy TrEMBL
Match: A0A0A0KRP2 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420350 PE=4 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 2.1e-269
Identity = 475/480 (98.96%), Postives = 479/480 (99.79%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTS 420
           NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTS
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEESNHAPGEQNEAELLNSSDDEDEDENTS 420

Query: 421 SHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDNVRGDRRDN 480
           SHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRG+RRDNVRG+RRD+VR DRRD+
Sbjct: 421 SHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGERRDNVRGERRDHVRADRRDH 480

BLAST of CsaV3_5G024080 vs. ExPASy TrEMBL
Match: A0A1S4DXA3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489660 PE=4 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 1.8e-236
Identity = 435/487 (89.32%), Postives = 448/487 (91.99%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPL RTQ QLHI QIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRL+KLLMLSRVHKVPVSIIDQLKWDLGLPKD+V+SIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVG QNFASGSGDMRVLELVCWNNELATSV+EKMA KVK D SK M ITFPMKY
Sbjct: 181 FPDYFKVVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEE----SNHAPGEQNEAELLNSSD----D 420
           NKYLHLMNTVEEDSKTTTKHI TRQQKQEQK+E    S+ A G QNEAELLNSSD    D
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDN 480
           EDEDENTSS   V AD RDN+R D R NVR DRR +V  DRRD+VR DRRD+VR DRRD 
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADLRDNVRADRRDHVCADRRDHVRADRRDHVRADRRDQ 480

BLAST of CsaV3_5G024080 vs. ExPASy TrEMBL
Match: A0A5D3CKY8 (Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00040 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.3e-236
Identity = 433/488 (88.73%), Postives = 448/488 (91.80%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPL RTQ QLHI QIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRL+KLLMLSRVHKVPVSIIDQLKWDLGLPKD+V+SIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSV+EKMA KVK D SK M+ITFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEE----SNHAPGEQNEAELLNSSD----D 420
           NKYLHLMNTVEEDSKTT KHI TRQQKQEQK+E    S+ A G QNEAELLNSSD    D
Sbjct: 361 NKYLHLMNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDN 480
           EDEDENTSS   V AD RDN+R D R  VR DRR +VR DR D VR DR D+VR DRRD+
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADPRDQVRADRRDHVRADRGDQVRADRGDHVRADRRDH 480

BLAST of CsaV3_5G024080 vs. ExPASy TrEMBL
Match: A0A5A7UN72 (Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00040 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.3e-236
Identity = 433/488 (88.73%), Postives = 448/488 (91.80%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPL RTQ QLHI QIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRL+KLLMLSRVHKVPVSIIDQLKWDLGLPKD+V+SIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSV+EKMA KVK D SK M+ITFPMKY
Sbjct: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMHITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEE----SNHAPGEQNEAELLNSSD----D 420
           NKYLHLMNTVEEDSKTT KHI TRQQKQEQK+E    S+ A G QNEAELLNSSD    D
Sbjct: 361 NKYLHLMNTVEEDSKTTAKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDN 480
           EDEDENTSS   V AD RDN+R D R  VR DRR +VR DR D VR DR D+VR DRRD+
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADPRDQVRADRRDHVRADRGDQVRADRGDHVRADRRDH 480

BLAST of CsaV3_5G024080 vs. ExPASy TrEMBL
Match: A0A1S4DWI5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489660 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 1.2e-235
Identity = 434/487 (89.12%), Postives = 447/487 (91.79%), Query Frame = 0

Query: 1   MFLFFCSYSGPLRRTQLQLHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFF SYSGPL RTQ QLHI QIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSYSGPLSRTQQQLHISQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPLSIITQKREILRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVL 120
           FIKSEPSKSVP+SIITQKREILRIP RPIDLIRKYPSIFEEFLPGGIG+QPHVKLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKREILRIPMRPIDLIRKYPSIFEEFLPGGIGVQPHVKLTSKVL 120

Query: 121 ELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPD 180
           ELDAEEQLTYQTSTCRQQAADRL+KLLMLSRVHKVPVSIIDQLKWDLGLPKD+V+SIVP+
Sbjct: 121 ELDAEEQLTYQTSTCRQQAADRLLKLLMLSRVHKVPVSIIDQLKWDLGLPKDFVQSIVPE 180

Query: 181 FPDYFKVVGHQNFASGSGDMRVLELVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKY 240
           FPDYFKVVG QNFASGSGDMRVLELVCWNNELATSV+EKMA KVK D SK M ITFPMKY
Sbjct: 181 FPDYFKVVGRQNFASGSGDMRVLELVCWNNELATSVLEKMAAKVKHDTSKRMDITFPMKY 240

Query: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300
           SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWTVAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIR 360

Query: 361 NKYLHLMNTVEEDSKTTTKHIDTRQQKQEQKEE----SNHAPGEQNEAELLNSSD----D 420
           NKYLHLMNTVEEDSKTTTKHI TRQQKQEQK+E    S+ A G QNEAELLNSSD    D
Sbjct: 361 NKYLHLMNTVEEDSKTTTKHISTRQQKQEQKQEQKEGSDDAFGVQNEAELLNSSDDEDED 420

Query: 421 EDEDENTSSHRNVCADQRDNIRGDRRGNVRCDRRGNVRGDRRDNVRGDRRDNVRGDRRDN 480
           EDEDENTSS   V AD RDN+R D R NVR DRR +V  DR D VR DRRD+VR DRRD+
Sbjct: 421 EDEDENTSSPHTVRADPRDNVRADLRDNVRADRRDHVCADRGDQVRADRRDHVRADRRDH 480

BLAST of CsaV3_5G024080 vs. TAIR 10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 438.3 bits (1126), Expect = 7.8e-123
Identity = 235/442 (53.17%), Postives = 318/442 (71.95%), Query Frame = 0

Query: 30  VDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPTRPI 89
           V+ T  +VRDRGLDHAVEREKNL P+++IKD I+SEP+KSVP+S+IT +++ LR+P RPI
Sbjct: 25  VEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPI 84

Query: 90  DLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLVKLLML 149
           + IR +PS+F+EFLPGGIGI PH+ LT ++L  DA+EQL Y + T +Q  ADRL+KLLM+
Sbjct: 85  EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMI 144

Query: 150 SRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLELVCWN 209
           +R++K+P+ I+D LKWDLGLPKDYVE++VP+FPDYF+V+        SG+   LELVCW+
Sbjct: 145 NRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVI-KSKLRGCSGE---LELVCWS 204

Query: 210 NELATSVIEKMAVKV-KPDKSKGMYITFPMKYSNGFEMDKKFKKWVDEWQKLPYISPYEN 269
           NE A SV+EK A  + K + +KG  I FPMK+SNGF +DKK KKW+D+WQKLPYISPYEN
Sbjct: 205 NEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYEN 264

Query: 270 ASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHHPGIF 329
           A HLS  SDESDKW  A+LHE++++ V+KK EK+ IL +GE+ GLRSRFKR L +HPGIF
Sbjct: 265 ALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIF 324

Query: 330 YISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVEEDSK---TTTKHIDTRQ 389
           Y+SSK  T+TVVL++GYKRG ++ESN L+  RN+Y+ LMNTV++D+K   +++K  D  +
Sbjct: 325 YLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSSKKEDKGK 384

Query: 390 QKQE-----QKEESNHAPGEQNEAELLNSSDDEDEDENTSSHRNVCADQRDNI-RGDRRG 449
            + E      K E++   G   E +      D+DED++         DQ  ++ RG R  
Sbjct: 385 VEGEVCDTDAKAENDDISGSDVEDDRQGDFVDDDEDDDE-------VDQNQDLERGRRNS 444

Query: 450 NVRCDRRGNVRGDRRDNVRGDR 462
           + R  RR       RD  +  R
Sbjct: 445 SPRSGRRSFGNSGSRDKAQSRR 455

BLAST of CsaV3_5G024080 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 297.4 bits (760), Expect = 2.1e-80
Identity = 150/365 (41.10%), Postives = 230/365 (63.01%), Query Frame = 0

Query: 27  RTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPT 86
           RT+V+  + WV D  LD AV+REKNL  V+++KD I S PSKS+PLS ++  + ++ +  
Sbjct: 16  RTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNLHI 75

Query: 87  RPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLVKL 146
                 +KYPS+F  F P       HV+LT + L L  EE+  + +   R     RL K 
Sbjct: 76  TAAAFFQKYPSVFTTFQPSP-SHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQRLTKF 135

Query: 147 LMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLELV 206
           LML+    +P+ ++D+ ++DLGLP+DY+ S++ D+P+YF+V   ++  +G   +  L + 
Sbjct: 136 LMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTL-ALTIS 195

Query: 207 CWNNELATSVIEKMAVKVKPDK-SKGMYITFPMKYSNGFEMDKKFKKWVDEWQKLPYISP 266
              N L  S +E+    +   +  KG+ I + M +  G+E+ K+ K WV++WQ LPYISP
Sbjct: 196 SRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNLPYISP 255

Query: 267 YENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHHP 326
           YENA HL   SD+++KW VA+LHELL +LV+KKTE +N++C+GEY G   RFK+AL+HHP
Sbjct: 256 YENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVHHP 315

Query: 327 GIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVEEDSKTTTKHIDTRQ 386
           GIFY+S K  T TVVL+E Y +  ++E +PLM IR++Y++LM+      K    H   R 
Sbjct: 316 GIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRGKKRDYVHGVERS 375

Query: 387 QKQEQ 391
            ++++
Sbjct: 376 NRKKR 378

BLAST of CsaV3_5G024080 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 223.0 bits (567), Expect = 5.1e-58
Identity = 127/344 (36.92%), Postives = 195/344 (56.69%), Query Frame = 0

Query: 30  VDGTINWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRIP--TR 89
           V+  + WV+DR LD  V REK+L  V N+   I + P   +P+  +   R  L +P   +
Sbjct: 33  VNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELK 92

Query: 90  PIDLIRKYPSIFEEFL---PGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLV 149
               IR+YP+IF E       G  + P   LT + ++L  EE    + +   +    RL 
Sbjct: 93  LSAFIRRYPNIFVEHCYWDSAGTSV-PCFGLTRETIDLYYEEVDVSRVN--ERDVLVRLC 152

Query: 150 KLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLE 209
           KLLML+    + +  ID L+WDLGLP DY +S++   PD F +V        S D+  L+
Sbjct: 153 KLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLV------KLSSDLDGLK 212

Query: 210 LVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEMDKKFKKWVDEWQKLPYIS 269
           L+ W+  LA S      ++++ D      + FP+K++ GF + +K  +W+ EWQ+LPY S
Sbjct: 213 LIHWDEHLAVS-----QMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTS 272

Query: 270 PYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHH 329
           PY +ASHL P +D S+K  V + HELLH+ + KKTE++N+  + + F L  +F +    H
Sbjct: 273 PYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERH 332

Query: 330 PGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMN 369
           PGIFYIS K  T TV+L+E Y R  ++E +PL+ +R K+ ++MN
Sbjct: 333 PGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMN 362

BLAST of CsaV3_5G024080 vs. TAIR 10
Match: AT2G39120.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-57
Identity = 125/347 (36.02%), Postives = 201/347 (57.93%), Query Frame = 0

Query: 27  RTYVDGTINWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRI 86
           RTYVD  + W RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     +
Sbjct: 22  RTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV 81

Query: 87  PTRPIDLIRKYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLV 146
            T+    +RK+PSIFEEF+     + P  +LT +  ELD +E++ YQTS       DRL 
Sbjct: 82  STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVYQTSA--DDLRDRLK 141

Query: 147 KLLMLSRVHKVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLE 206
           KL+++S+ + +P+SI+  +KW LGLP DY++     FPD   +     F      ++ L 
Sbjct: 142 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQ-----FPD-MNLDSSFRFVDMEDGVKGLA 201

Query: 207 LVCWNNELATSVIEKMAVKVKPDKSKGMYITFPMKYSNGFEMDKKFKKWVDEWQKLPYIS 266
           +     +   SV++K A+K +  +     I FP+  S G  +  K + W+ E+QKLPY+S
Sbjct: 202 VDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVS 261

Query: 267 PYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHH 326
           PY++ S L P+SD ++K  V  LHELL + V    E++ +LC+ ++FGL  +  +A   H
Sbjct: 262 PYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERH 321

Query: 327 PGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVE 372
           P IFY+S K  T T +L+E Y+  + VE++P++ +R KY+ LM   E
Sbjct: 322 PQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSE 359

BLAST of CsaV3_5G024080 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 214.2 bits (544), Expect = 2.4e-55
Identity = 126/393 (32.06%), Postives = 211/393 (53.69%), Query Frame = 0

Query: 34  INWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPLSIITQKREILRIPTRPIDLIR 93
           + WV+++ LDH ++ E +L     +KD IK  P+  +    +   +++L +    +  +R
Sbjct: 33  LKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPVLRFLR 92

Query: 94  KYPSIFEEFLPGGIGIQPHVKLTSKVLELDAEEQLTYQTSTCRQQAADRLVKLLMLSRVH 153
           +YP++F EF        P  KLT   L LD++E++ +Q+        +RL ++LM+ R  
Sbjct: 93  RYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSH--EADTVERLCRVLMMMRSK 152

Query: 154 KVPVSIIDQLKWDLGLPKDYVESIVPDFPDYFKVVGHQNFASGSGDMRVLELVCWNNELA 213
            V +  +  LK+DLGLP +Y +++V  +PD+F       F   S     L+LV W +E A
Sbjct: 153 TVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF------CFVKASNGNPCLKLVKWRDEFA 212

Query: 214 TSVIEKMAVKVKPDKSKGMY---------ITFPMKYSNGFEMDKKFKKWVDEWQKLPYIS 273
            S ++K          +  Y         +TFPM +  G+   KK K W+DE+QKLPYIS
Sbjct: 213 FSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYIS 272

Query: 274 PYENASHLSPNSDESDKWTVAILHELLHMLVTKKTEKENILCIGEYFGLRSRFKRALLHH 333
           PY++ S++ P SD  +K  VA+LHELL + + KKT++  +  +     +  +F R    +
Sbjct: 273 PYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRY 332

Query: 334 PGIFYISSKAGTYTVVLKEGYKRGSVVESNPLMNIRNKYLHLMNTVEEDSKTTTKHIDTR 393
           PGIFY+S K  T TV+LKEGY+RG +V+ +PL  +R+K+ H+M T           +   
Sbjct: 333 PGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVSKE 392

Query: 394 QQKQEQKEESNHAPGEQNEAELLNSSDDEDEDE 418
           +   ++ E+     G + E E++  S+ E++ E
Sbjct: 393 ELLLDRPEDDLEEEGSEEE-EIVEGSELEEDSE 416

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8648432.17.7e-274100.00hypothetical protein Csa_023661 [Cucumis sativus][more]
XP_031741647.14.1e-26799.79protein WHAT'S THIS FACTOR 9, mitochondrial, partial [Cucumis sativus][more]
XP_016900350.13.7e-23689.32PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucumis melo][more]
TYK12080.11.1e-23588.73protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo var. makuwa][more]
KAA0056510.11.1e-23588.73protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9ZUZ63.6e-5636.02Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Q689D62.3e-3128.82Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
A0MFS51.3e-2926.48Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q65XL54.9e-2926.20Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV81.1e-2825.00Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A0A0KRP22.1e-26998.96PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420350 PE=4 S... [more]
A0A1S4DXA31.8e-23689.32protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5D3CKY85.3e-23688.73Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11... [more]
A0A5A7UN725.3e-23688.73Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S4DWI51.2e-23589.12protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103... [more]
Match NameE-valueIdentityDescription
AT1G71850.17.8e-12353.17Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G24320.12.1e-8041.10Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G48040.15.1e-5836.92Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G39120.12.6e-5736.02Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G58520.12.4e-5532.06Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 37..370
e-value: 6.3E-117
score: 390.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..399
NoneNo IPR availablePANTHERPTHR31476:SF16F14O23.23 PROTEINcoord: 21..430
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 21..430

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G024080.1CsaV3_5G024080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding