CsaV3_5G015400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G015400
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionactivator of 90 kDa heat shock protein ATPase homolog
Locationchr5: 12712307 .. 12712555 (-)
RNA-Seq ExpressionCsaV3_5G015400
SyntenyCsaV3_5G015400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAAATTAACGTTCGATGAGCTCGAGTCTAGGGTCAACATTGTGAATTTGGTAAATTTCGACGTACCTGACAAGGACAGGTTGGTGTCTCTAATCATTGTGCTAATGAATGATATTTGTTTACCATTGTGAAGTTGGTGCTTTCTTATCATTGTTCATCATTTGGTTTGAATTAGATATGAGAATGCAACTGTGGTGGAGAATACGAAGATGGGCTGGCTGGATATTATATTCCACAAGATGAGAGTA

mRNA sequence

GTGAAATTAACGTTCGATGAGCTCGAGTCTAGGGTCAACATTGTGAATTTGGTAAATTTCGACGTACCTGACAAGGACAGATATGAGAATGCAACTGTGGTGGAGAATACGAAGATGGGCTGGCTGGATATTATATTCCACAAGATGAGAGTA

Coding sequence (CDS)

GTGAAATTAACGTTCGATGAGCTCGAGTCTAGGGTCAACATTGTGAATTTGGTAAATTTCGACGTACCTGACAAGGACAGATATGAGAATGCAACTGTGGTGGAGAATACGAAGATGGGCTGGCTGGATATTATATTCCACAAGATGAGAGTA

Protein sequence

VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRV
Homology
BLAST of CsaV3_5G015400 vs. NCBI nr
Match: KAE8648230.1 (hypothetical protein Csa_018427, partial [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 6.1e-20
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRV 52
          VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRV
Sbjct: 1  VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMRV 51

BLAST of CsaV3_5G015400 vs. NCBI nr
Match: XP_022983012.1 (activator of 90 kDa heat shock protein ATPase homolog 1 [Cucurbita maxima])

HSP 1 Score: 76.6 bits (187), Expect = 6.7e-11
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDELE  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 295 VKLTFDELEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIR 344

BLAST of CsaV3_5G015400 vs. NCBI nr
Match: XP_008443031.1 (PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis melo] >KAA0043747.1 activator of 90 kDa heat shock protein ATPase-like protein 1 [Cucumis melo var. makuwa] >TYK25385.1 activator of 90 kDa heat shock protein ATPase-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 4.4e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 296 VKLTFDEPEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIR 345

BLAST of CsaV3_5G015400 vs. NCBI nr
Match: XP_023527733.1 (activator of 90 kDa heat shock protein ATPase homolog 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 73.9 bits (180), Expect = 4.4e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 295 VKLTFDEPEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIR 344

BLAST of CsaV3_5G015400 vs. NCBI nr
Match: XP_004136562.1 (activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis sativus] >KGN59286.1 hypothetical protein Csa_001772 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 4.4e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 296 VKLTFDEPEPGVTIVKLVHTDVPEEDRYGNATVVENTERGWRDLIFHKIR 345

BLAST of CsaV3_5G015400 vs. ExPASy TrEMBL
Match: A0A6J1IY42 (activator of 90 kDa heat shock protein ATPase homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC111481684 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-11
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDELE  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 295 VKLTFDELEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIR 344

BLAST of CsaV3_5G015400 vs. ExPASy TrEMBL
Match: A0A5A7TPL6 (Activator of 90 kDa heat shock protein ATPase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005270 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 296 VKLTFDEPEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIR 345

BLAST of CsaV3_5G015400 vs. ExPASy TrEMBL
Match: A0A0A0LGX2 (Aha1_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G800690 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 296 VKLTFDEPEPGVTIVKLVHTDVPEEDRYGNATVVENTERGWRDLIFHKIR 345

BLAST of CsaV3_5G015400 vs. ExPASy TrEMBL
Match: A0A1S3B732 (activator of 90 kDa heat shock protein ATPase homolog 1 OS=Cucumis melo OX=3656 GN=LOC103486749 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDE E  V IV LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 296 VKLTFDEPEPGVTIVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIR 345

BLAST of CsaV3_5G015400 vs. ExPASy TrEMBL
Match: A0A6J1F5M7 (activator of 90 kDa heat shock protein ATPase homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442335 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-10
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VKLTFDE E  V +V LV+ DVP++DRY NATVVENT+ GW D+IFHK+R
Sbjct: 295 VKLTFDEPEPGVTVVKLVHSDVPEEDRYGNATVVENTERGWRDLIFHKIR 344

BLAST of CsaV3_5G015400 vs. TAIR 10
Match: AT3G12050.1 (Aha1 domain-containing protein )

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-12
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VK+ F+E +  V IVNL + DVP++DRY NATVVENT+ GW D+IFH++R
Sbjct: 304 VKIVFEEPQPGVTIVNLTHTDVPEEDRYGNATVVENTERGWRDLIFHRIR 353

BLAST of CsaV3_5G015400 vs. TAIR 10
Match: AT3G12050.2 (Aha1 domain-containing protein )

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-12
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 1   VKLTFDELESRVNIVNLVNFDVPDKDRYENATVVENTKMGWLDIIFHKMR 51
           VK+ F+E +  V IVNL + DVP++DRY NATVVENT+ GW D+IFH++R
Sbjct: 265 VKIVFEEPQPGVTIVNLTHTDVPEEDRYGNATVVENTERGWRDLIFHRIR 314

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8648230.16.1e-20100.00hypothetical protein Csa_018427, partial [Cucumis sativus][more]
XP_022983012.16.7e-1172.00activator of 90 kDa heat shock protein ATPase homolog 1 [Cucurbita maxima][more]
XP_008443031.14.4e-1070.00PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis melo... [more]
XP_023527733.14.4e-1070.00activator of 90 kDa heat shock protein ATPase homolog 1 [Cucurbita pepo subsp. p... [more]
XP_004136562.14.4e-1070.00activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis sativus] >KGN59... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1IY423.3e-1172.00activator of 90 kDa heat shock protein ATPase homolog 1 OS=Cucurbita maxima OX=3... [more]
A0A5A7TPL62.1e-1070.00Activator of 90 kDa heat shock protein ATPase-like protein 1 OS=Cucumis melo var... [more]
A0A0A0LGX22.1e-1070.00Aha1_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G800690 PE=3... [more]
A0A1S3B7322.1e-1070.00activator of 90 kDa heat shock protein ATPase homolog 1 OS=Cucumis melo OX=3656 ... [more]
A0A6J1F5M72.8e-1068.00activator of 90 kDa heat shock protein ATPase homolog 1-like OS=Cucurbita moscha... [more]
Match NameE-valueIdentityDescription
AT3G12050.12.2e-1260.00Aha1 domain-containing protein [more]
AT3G12050.22.2e-1260.00Aha1 domain-containing protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G015400.1CsaV3_5G015400.1mRNA