CsaV3_5G014760 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G014760
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 11869643 .. 11869906 (-)
RNA-Seq ExpressionCsaV3_5G014760
SyntenyCsaV3_5G014760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAGAAGTTGCAAATTGCCGACATAGGGATGGGACGTTGGAAGTCCCCAGTTGCCAACATGCTACTTCCGTCAGCATTGCACGTGTTGGGAGAAATGCATTCCTGACACCTTCTCGCTGTCGAGTTGGGAATGACTTCCTTGACGCACTACTATCGACGTTCTTTCTGACGACACAATGTATTTCGGGAGAGCCTTTCCCAAAGTTGTTTGTTATATATACTGACACCTTCTTGCATATGGAGACTCTTGAATTCTTGTAG

mRNA sequence

ATGCTAGAAGTTGCAAATTGCCGACATAGGGATGGGACGTTGGAAGTCCCCAGTTGCCAACATGCTACTTCCGTCAGCATTGCACGTGTTGGGAGAAATGCATTCCTGACACCTTCTCGCTGTCGAGTTGGGAATGACTTCCTTGACGCACTACTATCGACGTTCTTTCTGACGACACAATGTATTTCGGGAGAGCCTTTCCCAAAGTTGTTTGTTATATATACTGACACCTTCTTGCATATGGAGACTCTTGAATTCTTGTAG

Coding sequence (CDS)

ATGCTAGAAGTTGCAAATTGCCGACATAGGGATGGGACGTTGGAAGTCCCCAGTTGCCAACATGCTACTTCCGTCAGCATTGCACGTGTTGGGAGAAATGCATTCCTGACACCTTCTCGCTGTCGAGTTGGGAATGACTTCCTTGACGCACTACTATCGACGTTCTTTCTGACGACACAATGTATTTCGGGAGAGCCTTTCCCAAAGTTGTTTGTTATATATACTGACACCTTCTTGCATATGGAGACTCTTGAATTCTTGTAG

Protein sequence

MLEVANCRHRDGTLEVPSCQHATSVSIARVGRNAFLTPSRCRVGNDFLDALLSTFFLTTQCISGEPFPKLFVIYTDTFLHMETLEFL*
Homology
[Close]
BLAST of CsaV3_5G014760 vs. NCBI nr
Match: KGN49634.1 (hypothetical protein Csa_018398 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 2.0e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MLEVANCRHRDGTLEVPSCQHATSVSIARVGRNAFLTPSRCRVGNDFLDALLSTFFLTTQ 60
          MLEVANCRHRDGTLEVPSCQHATSVSIARVGRNAFLTPSRCRVGNDFLDALLSTFFLTTQ
Sbjct: 1  MLEVANCRHRDGTLEVPSCQHATSVSIARVGRNAFLTPSRCRVGNDFLDALLSTFFLTTQ 60

Query: 61 CISGEPFPKLFVIYTDTFLHMETLEFL 88
          CISGEPFPKLFVIYTDTFLHMETLEFL
Sbjct: 61 CISGEPFPKLFVIYTDTFLHMETLEFL 87

[Close]
BLAST of CsaV3_5G014760 vs. ExPASy TrEMBL
Match: A0A0A0KLA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G034250 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.5e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MLEVANCRHRDGTLEVPSCQHATSVSIARVGRNAFLTPSRCRVGNDFLDALLSTFFLTTQ 60
          MLEVANCRHRDGTLEVPSCQHATSVSIARVGRNAFLTPSRCRVGNDFLDALLSTFFLTTQ
Sbjct: 1  MLEVANCRHRDGTLEVPSCQHATSVSIARVGRNAFLTPSRCRVGNDFLDALLSTFFLTTQ 60

Query: 61 CISGEPFPKLFVIYTDTFLHMETLEFL 88
          CISGEPFPKLFVIYTDTFLHMETLEFL
Sbjct: 61 CISGEPFPKLFVIYTDTFLHMETLEFL 87

The following BLAST results are available for this feature:
BLAST of CsaV3_5G014760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49634.12.0e-42100.00hypothetical protein Csa_018398 [Cucumis sativus][more]
BLAST of CsaV3_5G014760 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G014760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLA59.5e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G034250 PE=4 SV=1[more]
BLAST of CsaV3_5G014760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G014760.1CsaV3_5G014760.1mRNA