CsaV3_5G014620 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G014620
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	cell number regulator 2-like
Location	chr5: 11658345 .. 11660812 (-)
RNA-Seq Expression	CsaV3_5G014620
Synteny	CsaV3_5G014620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAATTGGAGTATAGAAGAACTTCACAGGCCACAATTGTGTCTTAAAGTTAGTTAAGTATTGGTTTAGTTGTTTGAAATATTAAAAGATGGGCAGCGACGATGGTTTTCTGAACAACTCCGGAAACGAGTCGCCATGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTAAATTCTCTCTCTCTGATCTCTCTCTCTTCTTGTTATTTCTATCTATAATGAACATGTTTAGGAAGGATTTTTGACGAGTTATGTCAGCTTCATTTTAAAACAGTGGTTTTTACATTTTTTGTTGGGTGTTTTGGAATCATTTCCTTGAGATGTATTGCATATATATGTGATGTTATATCTCAAAACCAATGAACAATAAGAAGGAATATATTTGTGTATGATCGAATACTTGCTTTGAGCTACGTTAGCAACAAAGATGATTATTGATTGATGTATTGTCTATCAATACTTGTCAGTTTTGATGAAGGTAGCAATAACAACTAGCCAATTAACCAACTAGTCGATTATTGTTGGTATTGTATGTGGGATAAGTTGATGAGGAAAAAACAAGAGAACAAAGAAAAAGATGAGAGCTGGAGTTGGTATATATAGAGGAACTAGAAAAAAAGATTAAAAAGAAGTAGTTAGGGGCAATGAGAAGAAGAAAATAGAAGAGAAAGAAAGAAGGAATAATTAGGAGAAGAAATAAAAGAAAAAGAAATTGGCAGGAAAGTAAAGAAAAATGAAAATGAAAGAAAGAAAGATCGAAAAAGCAGAACGAAAGAAAAAGGAGAGAAATTAATGAACGGGAAAAATAAAAGGATTGAAAATGGAGAAGGGGAAAGGAAAAGATAAAATAAAATAAAATGATTGACCATATGGTGGCTAAATTTAGAAGTATATTTAATATTTCATTTTGATGCTTTCTTTATAATTACCCTAACTTTAACTATCTTTTATCTTTCATAATATTAGGTTGCTGTACAGCATGGTGTCCATGTGTGCCATTTGGGCAAGCCTCAGAGATCATAGATGAAGGATCAACTTGTATGCTCATATTTTAAACCATTTTTTAACCAACTTGTATACTAAACCTACTCTTTAACAAAATTATAAACATACATAATATTCTAAACAATTTATAATGATAAAGAAATTCTAAACCAAATATTTATTTCTTTTCTCATTTTTTTTAAATTACAAATTTAGTGTTTTTGAACTTTTAAGTTCGTGTTTATTTGATCAAAAATGGCTTAAATTTTTAATTTTATTTATAATATATCTAATATAACATTCCTACAATTTCAATTTTATGTCCACTATATTCCTTAAGAGTCATTTTGATAATTGATTATTGGTTTTTGGTTTTTTTTTCTAAGAATAGGTTTCTATTGGATTTGTAATTTTTTTTTCCTGTTTTTTAATTTTAAAACGTTTTGAAAAAATAAATTTTAAAAACGGTAAAATTGATTTCGAAATTTGTACTAAAAAACAATAATTTTAAAATTTATTTTTCTCCCTCCTTTATCACATTTTCCTATTTTTTTCATTTGTTAAATAAAATTAAAGGGTAAATTAACCAACATTCAAAATATCTTTTTTACCTTTCAATTCTAAATCCATTATCTCTTATTTTATTTTCTATTTCATAGTAAAATTGAGAGAGGTGAATGTGATAGGTTGTTTTCAAATATAGAAAAATATCTTAAAATATTTAAAAATTCCAAATTTTCGTAGTTCTAGCTTAATTTTAAAAACGAAAAATCGGGGAAGTGAAATAAATTATTATTAAACATAGAATGAGGTATATGTTAGGATTTGGAATTGAAAATGACGACATATGTAATTGTTTATGTGTTGTGGATGCAGCTTGTTTTGGTAACGGATTAATCTTTTGTCTAATTGCTACCTTTACACCCTGCATTTGCCTTTACACTTGTTCGTATCGATCTCGATTGAGGAAAAAATACAATCTTAAAGAAACACCATGCAACGATTGTTGCGTTCATTGTTGGTGTTGGAGTTGTGCTATGTGTCAAGAGTATCGTGAGCTTCAAAACCGAGGTTTCAACATGCATATCGGTATGTTCTCTACTCTCTTTTACATGTGTTTTTCTTTTTTAAAATATGATCATAGATTGATCGAGTGTTCTACGCTTAGGTTGGCAAGAAAATATGCAGAGAGGAAACAAGGGAATAGAGATCCCACCTACTGTCCCAGGACAAATGAAACGTTGAAGTTCAAATAATGCAAGTGATGGTTCTGATCTCTATGTATTTTTCCCCCTCGAGTTCAATAATGTGTGGAATTATGTCTTAATCTTTGTTTGATTAACCATATTTGTTAATCTGTATACTATAGTTTGTTATTATATATTTTGTTCATCTTGTATATTTAAACTAGTGAGAATACTTCTCCCTAAATAAATATTGAATAAGATTTCATTTGTTTACATATTGTGTAA

mRNA sequence

ATGGGCAGCGACGATGGTTTTCTGAACAACTCCGGAAACGAGTCGCCATGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTTGCTGTACAGCATGGTGTCCATGTGTGCCATTTGGGCAAGCCTCAGAGATCATAGATGAAGGATCAACTTCTTGTTTTGGTAACGGATTAATCTTTTGTCTAATTGCTACCTTTACACCCTGCATTTGCCTTTACACTTGTTCGTATCGATCTCGATTGAGGAAAAAATACAATCTTAAAGAAACACCATGCAACGATTGTTGCGTTCATTGTTGGTGTTGGAGTTGTGCTATGTGTCAAGAGTATCGTGAGCTTCAAAACCGAGGTTTCAACATGCATATCGGTTGGCAAGAAAATATGCAGAGAGGAAACAAGGGAATAGAGATCCCACCTACTGTCCCAGGACAAATGAAACGTTGA

Coding sequence (CDS)

ATGGGCAGCGACGATGGTTTTCTGAACAACTCCGGAAACGAGTCGCCATGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTTGCTGTACAGCATGGTGTCCATGTGTGCCATTTGGGCAAGCCTCAGAGATCATAGATGAAGGATCAACTTCTTGTTTTGGTAACGGATTAATCTTTTGTCTAATTGCTACCTTTACACCCTGCATTTGCCTTTACACTTGTTCGTATCGATCTCGATTGAGGAAAAAATACAATCTTAAAGAAACACCATGCAACGATTGTTGCGTTCATTGTTGGTGTTGGAGTTGTGCTATGTGTCAAGAGTATCGTGAGCTTCAAAACCGAGGTTTCAACATGCATATCGGTTGGCAAGAAAATATGCAGAGAGGAAACAAGGGAATAGAGATCCCACCTACTGTCCCAGGACAAATGAAACGTTGA

Protein sequence

MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENMQRGNKGIEIPPTVPGQMKR*

Homology

[Close]

BLAST of CsaV3_5G014620 vs. NCBI nr
Match: XP_004142270.1 (cell number regulator 2 [Cucumis sativus] >KGN49620.1 hypothetical protein Csa_018338 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 5.7e-90
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG
Sbjct: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG
Sbjct: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           FNMHIGWQENMQRGNKGIEIPPTVPGQMKR
Sbjct: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 150

[Close]

BLAST of CsaV3_5G014620 vs. NCBI nr
Match: XP_008464696.1 (PREDICTED: cell number regulator 2-like [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 1.2e-84
Identity = 141/150 (94.00%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           MGSDDGFL NS NESPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN 
Sbjct: 1   MGSDDGFLTNSDNESPWSSGLCDCFSDMGSCCCTTWCPCVPFGQASEIIDEGSTSCFGNA 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIFCLIA+FTPCICLYTCSYRSRLR+KYNLKETPCNDCCVHCWCWSCAMCQEYREL+NRG
Sbjct: 61  LIFCLIASFTPCICLYTCSYRSRLRRKYNLKETPCNDCCVHCWCWSCAMCQEYRELKNRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           FNMHIGWQEN+QR NKGIEIPPTVPGQMKR
Sbjct: 121 FNMHIGWQENVQRQNKGIEIPPTVPGQMKR 150

[Close]

BLAST of CsaV3_5G014620 vs. NCBI nr
Match: XP_038892870.1 (cell number regulator 2-like [Benincasa hispida])

HSP 1 Score: 284.6 bits (727), Expect = 4.8e-73
Identity = 125/150 (83.33%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           M S  G   NS N SPWSSGLCDCFSDM SCCCT WCPCVPFGQ SEIIDEGSTSCFGN 
Sbjct: 1   MASTGGIPANSTNGSPWSSGLCDCFSDMESCCCTTWCPCVPFGQTSEIIDEGSTSCFGNA 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIFCLIA+FTPCICLYTCSYRSRLR+KYNL+ETPCNDCCVH WCWSCA+CQEYREL++RG
Sbjct: 61  LIFCLIASFTPCICLYTCSYRSRLRRKYNLQETPCNDCCVHYWCWSCAICQEYRELKHRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           F+MHIGWQEN+QR NKGIEIPP V G+MKR
Sbjct: 121 FDMHIGWQENVQRRNKGIEIPPVVEGEMKR 150

[Close]

BLAST of CsaV3_5G014620 vs. NCBI nr
Match: XP_008452392.1 (PREDICTED: cell number regulator 2-like [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 5.3e-72
Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           M S  G   NS N SPWSSGLCDCFSD+GSCCCT WCPCVPFGQASEIIDEGSTSCFGN 
Sbjct: 1   MASAGGIAANSANGSPWSSGLCDCFSDIGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIF LIA+FTPCICLYTCSYRSRLR KYNL+ETPCNDCCVH WCWSCA+CQE+REL+NRG
Sbjct: 61  LIFLLIASFTPCICLYTCSYRSRLRGKYNLQETPCNDCCVHFWCWSCALCQEHRELKNRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           FNMHIGWQEN+QR N+  +IPPTV GQMKR
Sbjct: 121 FNMHIGWQENVQRRNRETQIPPTVEGQMKR 150

[Close]

BLAST of CsaV3_5G014620 vs. NCBI nr
Match: QDD67543.1 (Lsfw2.2 protein [Lagenaria siceraria])

HSP 1 Score: 280.4 bits (716), Expect = 9.1e-72
Identity = 125/150 (83.33%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           M S  G   NS N SPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN 
Sbjct: 1   MASAGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIF LIA+FTPCICLYTCSYRSRLR KY L+ETPCNDCCVH WCWSCAMCQEYREL++RG
Sbjct: 61  LIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           F+MHIGWQEN+QR N+GIEIPP V GQM R
Sbjct: 121 FDMHIGWQENVQRRNRGIEIPPIVEGQMNR 150

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-41
Identity = 71/135 (52.59%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 17  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCICLY 76
           WS+GLC+CF D  +CC T  CPC+ FGQ +EIID GSTSC  +G ++ L+   T C C+Y
Sbjct: 47  WSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGSTSCGTSGALYALVMLLTGCQCVY 106

Query: 77  TCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENMQR-GN 136
           +C YR+++R +Y L+ +PC+DCCVHC C  CA+CQEYREL+ RGF+M IGW  NM+R G 
Sbjct: 107 SCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCALCQEYRELKKRGFDMSIGWHANMERQGR 166

Query: 137 KGIEIPPTVPGQMKR 151
               +PP +   M R
Sbjct: 167 AAAAVPPHMHPGMTR 181

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy Swiss-Prot
Match: Q9LQU4 (Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.4e-36
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 14  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCI 73
           E  WS+G CDCFSD  +CC T WCPC+ FGQ +EI+D GSTSC   G ++ LIA  T C 
Sbjct: 13  EGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCA 72

Query: 74  CLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENMQR 133
           C+Y+C YR ++R +YN+K   C DC  H  C  C++ Q+YREL++RG++M +GW  N++R
Sbjct: 73  CIYSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVER 132

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy Swiss-Prot
Match: D9HP26 (Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.1e-35
Identity = 63/132 (47.73%), Postives = 87/132 (65.91%), Query Frame = 0


Query: 15  SPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCIC 74
           S WSSGL DCF D G CC T WCPC+ FG+ +EI+D G+TSC   G ++ ++A FT C  
Sbjct: 29  SQWSSGLLDCFDDCGLCCLTCWCPCITFGRVAEIVDRGATSCGTAGALYAVLAYFTGCQW 88

Query: 75  LYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENMQRG 134
           +Y+C+YR+++R +  L ETPC DC VH  C  CA+CQ+Y+EL+ RGF+  +GW  N    
Sbjct: 89  IYSCTYRAKMRAQLGLPETPCCDCLVHFCCEPCALCQQYKELKARGFDPVLGWDRN---- 148

Query: 135 NKGIEIPPTVPG 147
                +PP+  G
Sbjct: 149 --ATMLPPSAQG 154

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy Swiss-Prot
Match: D9HP25 (Cell number regulator 9 OS=Zea mays OX=4577 GN=CNR9 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.1e-35
Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = 0


Query: 17  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCICLY 76
           WSSGLC C  D G CC T WCPC+ FG+ +EI+D G+TSC   G I+ L+A FT C  +Y
Sbjct: 41  WSSGLCACSDDCGLCCLTCWCPCITFGRIAEIVDRGATSCGVAGTIYTLLACFTGCHWIY 100

Query: 77  TCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENMQRGNK 136
           +C+YRSR+R +  L E  C DCCVH  C  CA+ Q+YREL+ RGF+  +GW  N Q+   
Sbjct: 101 SCTYRSRMRAQLGLPEACCCDCCVHFCCEPCALSQQYRELKARGFDPDLGWDVNAQKAAA 160

Query: 137 GIEI-PPTVPGQMKR 151
              + PP   G M R
Sbjct: 161 AAAMYPPPAEGMMIR 175

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy Swiss-Prot
Match: D9HP23 (Cell number regulator 7 OS=Zea mays OX=4577 GN=CNR7 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-34
Identity = 68/140 (48.57%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 15  SPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFT--PC 74
           S WSSGLC CF D G CC T WCPCV FG+ +E++D G+TSC   G I+ L+A FT   C
Sbjct: 38  SQWSSGLCACFDDCGLCCMTCWCPCVTFGRIAEVVDRGATSCAAAGAIYTLLACFTGFQC 97

Query: 75  ICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENMQ 134
             +Y+C+YRS++R +  L +  C DCCVH  C  CA+CQ+YREL+ RG +  +GW  N Q
Sbjct: 98  HWIYSCTYRSKMRAQLGLPDVGCCDCCVHFCCEPCALCQQYRELRARGLDPALGWDVNAQ 157

Query: 135 R---GNKGIEI---PPTVPG 147
           +    N G  +   PPT  G
Sbjct: 158 KAANNNAGAGMTMYPPTAQG 177

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy TrEMBL
Match: A0A0A0KIS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G027940 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.7e-90
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG
Sbjct: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG
Sbjct: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           FNMHIGWQENMQRGNKGIEIPPTVPGQMKR
Sbjct: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 150

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy TrEMBL
Match: A0A1S3CM72 (cell number regulator 2-like OS=Cucumis melo OX=3656 GN=LOC103502518 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 5.9e-85
Identity = 141/150 (94.00%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           MGSDDGFL NS NESPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN 
Sbjct: 1   MGSDDGFLTNSDNESPWSSGLCDCFSDMGSCCCTTWCPCVPFGQASEIIDEGSTSCFGNA 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIFCLIA+FTPCICLYTCSYRSRLR+KYNLKETPCNDCCVHCWCWSCAMCQEYREL+NRG
Sbjct: 61  LIFCLIASFTPCICLYTCSYRSRLRRKYNLKETPCNDCCVHCWCWSCAMCQEYRELKNRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           FNMHIGWQEN+QR NKGIEIPPTVPGQMKR
Sbjct: 121 FNMHIGWQENVQRQNKGIEIPPTVPGQMKR 150

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy TrEMBL
Match: A0A1S3BT42 (cell number regulator 2-like OS=Cucumis melo OX=3656 GN=LOC103493439 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.6e-72
Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           M S  G   NS N SPWSSGLCDCFSD+GSCCCT WCPCVPFGQASEIIDEGSTSCFGN 
Sbjct: 1   MASAGGIAANSANGSPWSSGLCDCFSDIGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIF LIA+FTPCICLYTCSYRSRLR KYNL+ETPCNDCCVH WCWSCA+CQE+REL+NRG
Sbjct: 61  LIFLLIASFTPCICLYTCSYRSRLRGKYNLQETPCNDCCVHFWCWSCALCQEHRELKNRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           FNMHIGWQEN+QR N+  +IPPTV GQMKR
Sbjct: 121 FNMHIGWQENVQRRNRETQIPPTVEGQMKR 150

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy TrEMBL
Match: A0A4Y5UXT8 (Lsfw2.2 protein OS=Lagenaria siceraria OX=3668 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.4e-72
Identity = 125/150 (83.33%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60
           M S  G   NS N SPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN 
Sbjct: 1   MASAGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60

Query: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120
           LIF LIA+FTPCICLYTCSYRSRLR KY L+ETPCNDCCVH WCWSCAMCQEYREL++RG
Sbjct: 61  LIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRG 120

Query: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 151
           F+MHIGWQEN+QR N+GIEIPP V GQM R
Sbjct: 121 FDMHIGWQENVQRRNRGIEIPPIVEGQMNR 150

[Close]

BLAST of CsaV3_5G014620 vs. ExPASy TrEMBL
Match: A0A4Y5UYC6 (Lsfw2.2 protein OS=Lagenaria siceraria OX=3668 PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.0e-66
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 12  GNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTP 71
           GN SPWSSGLCDCFSDM SCCCT WCPCV FG+ASEIIDEGSTSCF N LIFCLIA+FTP
Sbjct: 6   GNGSPWSSGLCDCFSDMESCCCTIWCPCVAFGRASEIIDEGSTSCFRNALIFCLIASFTP 65

Query: 72  CICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENM 131
           CICLYTCSYRSRLR+KYNL+E+PCNDCCVH  CW+CA+CQEYREL+N GF+MHIGWQ+N+
Sbjct: 66  CICLYTCSYRSRLRRKYNLQESPCNDCCVHYLCWNCALCQEYRELKNHGFDMHIGWQKNV 125

Query: 132 QRGNKGIEIPPTVPGQMKR 151
           Q+ +KG+EIPP V G M R
Sbjct: 126 QKRDKGVEIPPVVEGHMIR 144

[Close]

BLAST of CsaV3_5G014620 vs. TAIR 10
Match: AT1G14870.1 (PLANT CADMIUM RESISTANCE 2 )

HSP 1 Score: 151.8 bits (382), Expect = 4.5e-37
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 14  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCI 73
           E  WS+G CDCFSD  +CC T WCPC+ FGQ +EI+D GSTSC   G ++ LIA  T C 
Sbjct: 13  EGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCA 72

Query: 74  CLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENMQR 133
           C+Y+C YR ++R +YN+K   C DC  H  C  C++ Q+YREL++RG++M +GW  N++R
Sbjct: 73  CIYSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVER 132

[Close]

BLAST of CsaV3_5G014620 vs. TAIR 10
Match: AT1G68610.1 (PLANT CADMIUM RESISTANCE 11 )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 70/150 (46.67%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 8   LNNSGNESP---------WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFG 67
           +N S N+ P         WS+ LC+C+ D+ SCC T WCPCV FG+ +E++D GSTSC  
Sbjct: 1   MNLSSNDQPSQGRIKAKDWSTDLCECWMDINSCCLTCWCPCVAFGRIAEVVDRGSTSCGV 60

Query: 68  NGLIFCLIATFTPC--ICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYREL 127
           +G ++ +I   T      LY+C YR++LR +YNLKE PC DCCVH  C  CA+CQEYR+L
Sbjct: 61  SGAMYMIIFMLTGYGGSSLYSCFYRTKLRAQYNLKERPCCDCCVHFCCEPCALCQEYRQL 120

Query: 128 Q-NRGFNMHIGWQENMQRGNKGIEIPPTVP 146
           Q NR  ++ IGW  NM+R  +     P+ P
Sbjct: 121 QHNRDLDLVIGWHGNMERHARLAASTPSAP 150

[Close]

BLAST of CsaV3_5G014620 vs. TAIR 10
Match: AT5G35525.1 (PLAC8 family protein )

HSP 1 Score: 144.8 bits (364), Expect = 5.6e-35
Identity = 66/144 (45.83%), Postives = 91/144 (63.19%), Query Frame = 0


Query: 10  NSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATF 69
           N   E  WS+G CDCFSD  +CC T  CPC+ FGQ ++I+D G+TSC   G ++ L+A  
Sbjct: 9   NPHAEGEWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGALYVLLAAI 68

Query: 70  TPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQE 129
           T C CLY+C YR ++R +YN++   C DC  H  C  CA+ QEYREL++RGF+M +GW  
Sbjct: 69  TGCGCLYSCIYRGKIRAQYNIRGDGCTDCLKHFCCELCALTQEYRELKHRGFDMSLGWAG 128

Query: 130 NM--QRGNKGIEI-PPTVPGQMKR 151
           N+  Q+   G+ +  P   G M R
Sbjct: 129 NVEKQQNQGGVAMGAPAFQGGMSR 152

[Close]

BLAST of CsaV3_5G014620 vs. TAIR 10
Match: AT1G14880.1 (PLANT CADMIUM RESISTANCE 1 )

HSP 1 Score: 134.8 bits (338), Expect = 5.7e-32
Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 0


Query: 14  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCI 73
           +  WS+G CDCFSD  +CC T  CPC+ FGQ +EI+D GS SC   G ++ LI   T C 
Sbjct: 12  QGEWSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGSKSCCAAGALYMLIDLITSCG 71

Query: 74  CLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQEN--M 133
            +Y C Y  ++R +YN+K   C DC  H  C  CA+ Q+YREL++RGF+M +GW  N   
Sbjct: 72  RMYACFYSGKMRAQYNIKGDGCTDCLKHFCCNLCALTQQYRELKHRGFDMSLGWAGNAEK 131

Query: 134 QRGNKGIEI-PPTVPGQMKR 151
           Q+   G+ +  P   G M R
Sbjct: 132 QQNQGGVAMGAPAFQGGMTR 151

[Close]

BLAST of CsaV3_5G014620 vs. TAIR 10
Match: AT3G18470.1 (PLAC8 family protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 14  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCI 73
           E  W+SGL  C  D  + C T +CPCV FG+ ++I DEG T C   G+ + LI       
Sbjct: 2   EKQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLP 61

Query: 74  CLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENMQR 133
           CL++C+YR+++R K+ L E+P +DC  H +C  CA+CQE+REL+ RG +  IGW  NMQR
Sbjct: 62  CLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQR 121

The following BLAST results are available for this feature:

BLAST of CsaV3_5G014620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142270.1	5.7e-90	100.00	cell number regulator 2 [Cucumis sativus] >KGN49620.1 hypothetical protein Csa_0...	[more]
XP_008464696.1	1.2e-84	94.00	PREDICTED: cell number regulator 2-like [Cucumis melo]	[more]
XP_038892870.1	4.8e-73	83.33	cell number regulator 2-like [Benincasa hispida]	[more]
XP_008452392.1	5.3e-72	82.67	PREDICTED: cell number regulator 2-like [Cucumis melo]	[more]
QDD67543.1	9.1e-72	83.33	Lsfw2.2 protein [Lagenaria siceraria]	[more]

BLAST of CsaV3_5G014620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6TYV8	3.9e-41	52.59	Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1	[more]
Q9LQU4	6.4e-36	50.83	Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 ...	[more]
D9HP26	7.1e-35	47.73	Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1	[more]
D9HP25	7.1e-35	49.63	Cell number regulator 9 OS=Zea mays OX=4577 GN=CNR9 PE=2 SV=1	[more]
D9HP23	1.6e-34	48.57	Cell number regulator 7 OS=Zea mays OX=4577 GN=CNR7 PE=2 SV=1	[more]

BLAST of CsaV3_5G014620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIS6	2.7e-90	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G027940 PE=4 SV=1	[more]
A0A1S3CM72	5.9e-85	94.00	cell number regulator 2-like OS=Cucumis melo OX=3656 GN=LOC103502518 PE=4 SV=1	[more]
A0A1S3BT42	2.6e-72	82.67	cell number regulator 2-like OS=Cucumis melo OX=3656 GN=LOC103493439 PE=4 SV=1	[more]
A0A4Y5UXT8	4.4e-72	83.33	Lsfw2.2 protein OS=Lagenaria siceraria OX=3668 PE=2 SV=1	[more]
A0A4Y5UYC6	8.0e-66	79.86	Lsfw2.2 protein OS=Lagenaria siceraria OX=3668 PE=2 SV=1	[more]

BLAST of CsaV3_5G014620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14870.1	4.5e-37	50.83	PLANT CADMIUM RESISTANCE 2	[more]
AT1G68610.1	1.5e-35	46.67	PLANT CADMIUM RESISTANCE 11	[more]
AT5G35525.1	5.6e-35	45.83	PLAC8 family protein	[more]
AT1G14880.1	5.7e-32	44.29	PLANT CADMIUM RESISTANCE 1	[more]
AT3G18470.1	1.6e-29	45.83	PLAC8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 17..115 e-value: 8.6E-28 score: 97.0
IPR006461	PLAC8 motif-containing protein	TIGRFAM	TIGR01571	TIGR01571	coord: 16..118 e-value: 1.1E-33 score: 114.2
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	DUF614 FAMILY PROTEIN-RELATED	coord: 12..149
None	No IPR available	PANTHER	PTHR15907:SF182	PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED	coord: 12..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G014620.1	CsaV3_5G014620.1	mRNA