CsaV3_5G013660 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G013660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Beta-galactosidase
Location	chr5: 10407313 .. 10409588 (-)
RNA-Seq Expression	CsaV3_5G013660
Synteny	CsaV3_5G013660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATGCCTCATGGGTTCGACCCTTTAACCCACACCATTCTCGCACGCTCTCTCGATGGTCGATACGCAATACAAAAACTACACTTCTCTGTTCGACACCTTTCAAGGTTAGAGGTTAAATGCGTAATTTTCTATTTTGGGAAATTTTCAAAGTTAAGAAAACTCCAAAAGAATTTACCGCCCAGAAAAGAAGTTTTTAAAAATGTTATGATTTTAATAAAGGCCAAATAATGATAAATGGCAAATTTTAATATCATGTTTAAAAAATAAAGGAAGTTGGTATGGATGAGGAAAAAATAGAGGATAATTTACATAAATATATTCAAACCTAAAAATATTTATATGCCATGTAACAAAAATTTAAAGTTCATTTAGCCACCATTGTTTTTTTATAAATTATAGATTTATCTTTTATTATTTATGAATATTGCGGGACTAATCTTCATGTGAGATTCGTGTTTGGAATCGAAGGGTCATTTTGAAATCAGAGATTGATTAGAAAGATTTTGAAGAAGTTGTTTTTACAGAGTATGAGTTTTGAAGAGTTAGGCATTTCGAGGGATCGCGTGGAAGTTAATCGACACAATGAAGAAAGTGGCGATCAAGAATAAGTAGGTGTTTTGATGTTCAACGTGAGATGAAGTCAGGCGAGAAGAGTTAGGATTTTTCTGGAAAATTTTCTATTTTTGCTTAATTAGTAGTCCACGTGTAAGAATTAAGGTTAAGTATGGCTATGATAAATATTAAACTCACATGTGTGGCACTTCAAGTTGGAACTAAGAAAGAGTTTAGCCAGTTAATATCAAATCATTGGAGCCCATGATCTATAGGTCCATTAGGTTCCCTCGCTAGCTCATAAGAAATCAACTTAGAACATTATGATAGAATAATTTGAATTGTTTGAATTAGGTAAAGAGAGAGAAACCGACATATATATTTGATAGAACCGTCGTTTATAACTTAAGATAGAGTTTCATATTTTAATGTGATTTAAATATTACAAATATGAATATGGATTCATATTTGGAAGATCAGAATTGATGGAAAAGGTCAAAGTTGTAAAAAGTCAGAATTGTTGACTTTTAACTTTGAAAGTTCAAACTTTAACCGACTTTATATTCAAATGTGATCTGAATTTTGAAAAAATGAATGTGAATTTATACTCGGGAGGTCAAAGTTAGTCAAGACGGATAAAATGGTAAAAATTCAAAATGTTGACTTTTAACTTTTTTAAATGTCAAACTACCATATTACCCTTGGAAACACATTGGAGGTAGTTAACAAATGGCTTCATGCATGTGAGACACCTATTTGGTGATATGTCAAGTATGGAGAATGGAAGCTCACTACATATAATGTTTGCATGTAGTTTTCTTATAAAAGGAATGGATTGTAAATGAAAGTTCTGTTTTTTTTGTTGAAATTGATTTTTTAATTTGGAATTGCAAAATCAAACCAAAATTTATTTTCTCTCCACAAGTTCTCAAAGCCAAGTTCATCCTCCTAAATCCATCTCTCTCACTATTTTCTCCACCGTTCGAGTCCCACAACTCAGTTCTAAGCCCGGAGACTAGCGGGTCAATGCTATTGGTAGTCCTATTTTCAAATACGTGATGAGATTACGATAATAGAATAGCATCAAATGTGAGATTTCTATTAACCCTATTTTTGTTTCATTTTAGAGTTGTAATGCATGTTAATCACTAAAGTGTTTAGTTGCAATTAGAGTAAAATTCGATCTTTATTCCGCTACACATGTCTACCACACTACCATCATATTTAATGATTATTACAAGTACTATGGAGGCACAAACTTTGGAAGAACATCAAGCGACCTATTCATCACTACGCCTTATGATTATGATGAACTACTCGATGAATATGGGAACTCAAATCAACCCAAATTGGGGCATCTCAAACAACTCTATGCATCCATCAAATTGGAAGATAAGATCCTCACAAATGGCACTCGCTCGAACCAAGATTATGGTAGTTCTGTCACTTTAATGAAGTTCTCCAACCCATCAACAGGGGAGAGGTTTTGCTTCTTAAGCAACACAGATGGTAGCAATGATGCAACCATAGGTTTGTAAGCATATGGAATATATTTTTTGCCAGCTTGGTCTGTGAGCATTCTTGATGGTTGCAACAAGGAGGTTTACAATACTGCAAAGGTTAATTCCAGAACATCTATATTTGTGAAGAAAGAATGCAAAACTCACATAGACTTGGGCTCCGGAGCCCATGAGCAACACACTACAAGAAATTGGTAA

mRNA sequence

ATGGTAATGCCTCATGGGTTCGACCCTTTAACCCACACCATTCTCGCACGCTCTCTCGATGGTCGATACGCAATACAAAAACTACACTTCTCTGTTCGACACCTTTCAAGGTTAGAGTACTATGGAGGCACAAACTTTGGAAGAACATCAAGCGACCTATTCATCACTACGCCTTATGATTATGATGAACTACTCGATGAATATGGGAACTCAAATCAACCCAAATTGGGGCATCTCAAACAACTCTATGCATCCATCAAATTGGAAGATAAGATCCTCACAAATGGCACTCGCTCGAACCAAGATTATGGTAGTTCTGTCACTTTAATGAAGTTCTCCAACCCATCAACAGGGGAGAGGTTTTGCTTCTTAAGCAACACAGATGGTAGCAATGATGCAACCATAGCTTGGTCTGTGAGCATTCTTGATGGTTGCAACAAGGAGGTTTACAATACTGCAAAGGTTAATTCCAGAACATCTATATTTGTGAAGAAAGAATGCAAAACTCACATAGACTTGGGCTCCGGAGCCCATGAGCAACACACTACAAGAAATTGGTAA

Coding sequence (CDS)

ATGGTAATGCCTCATGGGTTCGACCCTTTAACCCACACCATTCTCGCACGCTCTCTCGATGGTCGATACGCAATACAAAAACTACACTTCTCTGTTCGACACCTTTCAAGGTTAGAGTACTATGGAGGCACAAACTTTGGAAGAACATCAAGCGACCTATTCATCACTACGCCTTATGATTATGATGAACTACTCGATGAATATGGGAACTCAAATCAACCCAAATTGGGGCATCTCAAACAACTCTATGCATCCATCAAATTGGAAGATAAGATCCTCACAAATGGCACTCGCTCGAACCAAGATTATGGTAGTTCTGTCACTTTAATGAAGTTCTCCAACCCATCAACAGGGGAGAGGTTTTGCTTCTTAAGCAACACAGATGGTAGCAATGATGCAACCATAGCTTGGTCTGTGAGCATTCTTGATGGTTGCAACAAGGAGGTTTACAATACTGCAAAGGTTAATTCCAGAACATCTATATTTGTGAAGAAAGAATGCAAAACTCACATAGACTTGGGCTCCGGAGCCCATGAGCAACACACTACAAGAAATTGGTAA

Protein sequence

MVMPHGFDPLTHTILARSLDGRYAIQKLHFSVRHLSRLEYYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATIAWSVSILDGCNKEVYNTAKVNSRTSIFVKKECKTHIDLGSGAHEQHTTRNW*

Homology

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BLAST of CsaV3_5G013660 vs. NCBI nr
Match: KAE8648136.1 (hypothetical protein Csa_021532 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 5.0e-104
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MVMPHGFDPLTHTILARSLDGRYAIQKLHFSVRHLSRLEYYGGTNFGRTSSDLFITTPYD 60
           MVMPHGFDPLTHTILARSLDGRYAIQKLHFSVRHLSRLEYYGGTNFGRTSSDLFITTPYD
Sbjct: 1   MVMPHGFDPLTHTILARSLDGRYAIQKLHFSVRHLSRLEYYGGTNFGRTSSDLFITTPYD 60

Query: 61  YDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGER 120
           YDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGER
Sbjct: 61  YDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTGER 120

Query: 121 FCFLSNTDGSNDATIAWSVSILDGCNKEVYNTAKVNSRTSIFVKKECKTHIDLGSGAHEQ 180
           FCFLSNTDGSNDATIAWSVSILDGCNKEVYNTAKVNSRTSIFVKKECKTHIDLGSGAHEQ
Sbjct: 121 FCFLSNTDGSNDATIAWSVSILDGCNKEVYNTAKVNSRTSIFVKKECKTHIDLGSGAHEQ 180

Query: 181 HTTRNW 187
           HTTRNW
Sbjct: 181 HTTRNW 186

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BLAST of CsaV3_5G013660 vs. NCBI nr
Match: XP_008459141.1 (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 3.2e-50
Identity = 106/138 (76.81%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDYD  LDEYG+ NQPK GHLKQL+ASIKL +KILTNGTRS
Sbjct: 292 YHGGTNFGRTSGGPFITTSYDYDAPLDEYGSLNQPKWGHLKQLHASIKLGEKILTNGTRS 351

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           NQDYG SVTL KFSNPSTGERFCFLSNT+GSNDATI           AWSV+ILDGCNKE
Sbjct: 352 NQDYGGSVTLTKFSNPSTGERFCFLSNTNGSNDATIDLQTDGKYFVPAWSVTILDGCNKE 411

Query: 160 VYNTAKVNSRTSIFVKKE 167
           VYNTAKVNS+TS FVK++
Sbjct: 412 VYNTAKVNSQTSKFVKEQ 429

[Close]

BLAST of CsaV3_5G013660 vs. NCBI nr
Match: KAA0045403.1 (beta-galactosidase-like [Cucumis melo var. makuwa] >TYK11334.1 beta-galactosidase-like [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 7.1e-50
Identity = 103/138 (74.64%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDYD  LDEYGN NQPK GHLKQL++SIKL +KILTNGT+S
Sbjct: 292 YHGGTNFGRTSGGPFITTSYDYDAPLDEYGNLNQPKWGHLKQLHSSIKLGEKILTNGTQS 351

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           NQDYG+SVTL KFSNPSTGERFCFLSNT+GSNDATI           AWSV+ILDGCNKE
Sbjct: 352 NQDYGASVTLTKFSNPSTGERFCFLSNTNGSNDATIDLQTDGKYFVPAWSVTILDGCNKE 411

Query: 160 VYNTAKVNSRTSIFVKKE 167
           +YNTAK+NS+TS FVK++
Sbjct: 412 IYNTAKINSQTSKFVKEQ 429

[Close]

BLAST of CsaV3_5G013660 vs. NCBI nr
Match: XP_008464891.1 (PREDICTED: beta-galactosidase-like [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 7.1e-50
Identity = 103/138 (74.64%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDYD  LDEYGN NQPK GHLKQL++SIKL +KILTNGT+S
Sbjct: 292 YHGGTNFGRTSGGPFITTSYDYDAPLDEYGNLNQPKWGHLKQLHSSIKLGEKILTNGTQS 351

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           NQDYG+SVTL KFSNPSTGERFCFLSNT+GSNDATI           AWSV+ILDGCNKE
Sbjct: 352 NQDYGASVTLTKFSNPSTGERFCFLSNTNGSNDATIDLQTDGKYFVPAWSVTILDGCNKE 411

Query: 160 VYNTAKVNSRTSIFVKKE 167
           +YNTAK+NS+TS FVK++
Sbjct: 412 IYNTAKINSQTSKFVKEQ 429

[Close]

BLAST of CsaV3_5G013660 vs. NCBI nr
Match: XP_031737963.1 (beta-galactosidase 15-like [Cucumis sativus] >XP_031737965.1 beta-galactosidase 15-like [Cucumis sativus] >XP_031737966.1 beta-galactosidase 15-like [Cucumis sativus] >MBC9846026.1 hypothetical protein [Adiantum capillus-veneris])

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-49
Identity = 104/138 (75.36%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDY+  LDEYGN NQPK GHLKQL+ASIKL +KILTN TRS
Sbjct: 289 YHGGTNFGRTSGGPFITTSYDYNAPLDEYGNLNQPKWGHLKQLHASIKLGEKILTNSTRS 348

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           NQ++GSSVTL KFSNP+TGERFCFLSNTDG NDATI           AWSVSILDGCNKE
Sbjct: 349 NQNFGSSVTLTKFSNPTTGERFCFLSNTDGKNDATIDLQEDGKYFVPAWSVSILDGCNKE 408

Query: 160 VYNTAKVNSRTSIFVKKE 167
           VYNTAKVNS+TS+FVK++
Sbjct: 409 VYNTAKVNSQTSMFVKEQ 426

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BLAST of CsaV3_5G013660 vs. ExPASy Swiss-Prot
Match: P49676 (Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.4e-29
Identity = 67/138 (48.55%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGR +   +ITT YDYD  LDEYGN NQPK GHLKQL+  +K  +K LT G  S
Sbjct: 293 YHGGTNFGRVAGGPYITTSYDYDAPLDEYGNLNQPKWGHLKQLHTLLKSMEKPLTYGNIS 352

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI----------AWSVSILDGCNKEV 159
             D G+SVT   +S  +  +  CF+ N + + DA +          AWSVS+L  C+KE 
Sbjct: 353 TIDLGNSVTATVYS--TNEKSSCFIGNVNATADALVNFKGKDYNVPAWSVSVLPDCDKEA 412

Query: 160 YNTAKVNSRTSIFVKKEC 168
           YNTA+VN++TSI  +  C
Sbjct: 413 YNTARVNTQTSIITEDSC 428

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy Swiss-Prot
Match: Q9C6W4 (Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.9e-27
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNF RT+   +ITT YDYD  LDE+GN NQPK GHLKQL+  +   +K LT G  S
Sbjct: 288 YHGGTNFDRTAGGPYITTTYDYDAPLDEFGNLNQPKYGHLKQLHDVLHAMEKTLTYGNIS 347

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI----------AWSVSILDGCNKEV 159
             D+G+ VT   +         CF+ N + ++DA I          AWSVSIL  C  E 
Sbjct: 348 TVDFGNLVTATVYQTEEGSS--CFIGNVNETSDAKINFQGTSYDVPAWSVSILPDCKTET 407

Query: 160 YNTAKVNSRTSIFVKK 166
           YNTAK+N++TS+ VKK
Sbjct: 408 YNTAKINTQTSVMVKK 421

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy Swiss-Prot
Match: Q7G3T8 (Beta-galactosidase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0330600 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-26
Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   +ITT YDYD  LDEYGN  QPK GHLK L++ IK  +KIL +G   
Sbjct: 300 YHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKDLHSVIKSIEKILVHGEYV 359

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI----------AWSVSILDGCNKEV 159
           + +Y  +VT+ K++  ST    CF++N + + D  +          AWSVSIL  C    
Sbjct: 360 DANYSDNVTVTKYTLGSTSA--CFINNRNDNKDLNVTLDGNTHLLPAWSVSILPDCKTVA 419

Query: 160 YNTAKVNSRTSIFVKK 166
           +N+AK+ ++T+I VKK
Sbjct: 420 FNSAKIKAQTTIMVKK 433

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy Swiss-Prot
Match: Q8RUV9 (Beta-galactosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0533400 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26
Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   +ITT YDYD  LDEYGN  QPK GHLK+L++ +K  +K L +G   
Sbjct: 300 YHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYF 359

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSN----------TDGSNDATIAWSVSILDGCNKEV 159
           + +YG ++T+ K++  S+    CF++N           DG+     AWSVSIL  C    
Sbjct: 360 DTNYGDNITVTKYTLDSSSA--CFINNRFDDKDVNVTLDGATHLLPAWSVSILPDCKTVA 419

Query: 160 YNTAKVNSRTSIFVKK 166
           +N+AK+ ++TS+ VKK
Sbjct: 420 FNSAKIKTQTSVMVKK 433

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy Swiss-Prot
Match: Q9SCV5 (Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 5.7e-26
Identity = 63/139 (45.32%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGR +   +ITT YDY   LDE+GN NQPK GHLKQL+  +K  +K LT G  S
Sbjct: 294 YHGGTNFGRVAGGPYITTSYDYHAPLDEFGNLNQPKWGHLKQLHTVLKSMEKSLTYGNIS 353

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI----------AWSVSILDGCNKEV 159
             D G+S+    ++        CF+ N + + DA +          AWSVS+L  C+KE 
Sbjct: 354 RIDLGNSIKATIYTTKEGSS--CFIGNVNATADALVNFKGKDYHVPAWSVSVLPDCDKEA 413

Query: 160 YNTAKVNSRTSIFVKKECK 169
           YNTAKVN++TSI  +   K
Sbjct: 414 YNTAKVNTQTSIMTEDSSK 430

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy TrEMBL
Match: A0A1S3C8Z9 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103498345 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.5e-50
Identity = 106/138 (76.81%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDYD  LDEYG+ NQPK GHLKQL+ASIKL +KILTNGTRS
Sbjct: 292 YHGGTNFGRTSGGPFITTSYDYDAPLDEYGSLNQPKWGHLKQLHASIKLGEKILTNGTRS 351

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           NQDYG SVTL KFSNPSTGERFCFLSNT+GSNDATI           AWSV+ILDGCNKE
Sbjct: 352 NQDYGGSVTLTKFSNPSTGERFCFLSNTNGSNDATIDLQTDGKYFVPAWSVTILDGCNKE 411

Query: 160 VYNTAKVNSRTSIFVKKE 167
           VYNTAKVNS+TS FVK++
Sbjct: 412 VYNTAKVNSQTSKFVKEQ 429

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy TrEMBL
Match: A0A5A7TPD9 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00080 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.4e-50
Identity = 103/138 (74.64%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDYD  LDEYGN NQPK GHLKQL++SIKL +KILTNGT+S
Sbjct: 292 YHGGTNFGRTSGGPFITTSYDYDAPLDEYGNLNQPKWGHLKQLHSSIKLGEKILTNGTQS 351

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           NQDYG+SVTL KFSNPSTGERFCFLSNT+GSNDATI           AWSV+ILDGCNKE
Sbjct: 352 NQDYGASVTLTKFSNPSTGERFCFLSNTNGSNDATIDLQTDGKYFVPAWSVTILDGCNKE 411

Query: 160 VYNTAKVNSRTSIFVKKE 167
           +YNTAK+NS+TS FVK++
Sbjct: 412 IYNTAKINSQTSKFVKEQ 429

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy TrEMBL
Match: A0A1S3CP45 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103502650 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.4e-50
Identity = 103/138 (74.64%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDYD  LDEYGN NQPK GHLKQL++SIKL +KILTNGT+S
Sbjct: 292 YHGGTNFGRTSGGPFITTSYDYDAPLDEYGNLNQPKWGHLKQLHSSIKLGEKILTNGTQS 351

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           NQDYG+SVTL KFSNPSTGERFCFLSNT+GSNDATI           AWSV+ILDGCNKE
Sbjct: 352 NQDYGASVTLTKFSNPSTGERFCFLSNTNGSNDATIDLQTDGKYFVPAWSVTILDGCNKE 411

Query: 160 VYNTAKVNSRTSIFVKKE 167
           +YNTAK+NS+TS FVK++
Sbjct: 412 IYNTAKINSQTSKFVKEQ 429

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy TrEMBL
Match: A0A0A0M006 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G650110 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.7e-50
Identity = 104/138 (75.36%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDY+  LDEYGN NQPK GHLKQL+ASIKL +KILTN TRS
Sbjct: 289 YHGGTNFGRTSGGPFITTSYDYNAPLDEYGNLNQPKWGHLKQLHASIKLGEKILTNSTRS 348

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           NQ++GSSVTL KFSNP+TGERFCFLSNTDG NDATI           AWSVSILDGCNKE
Sbjct: 349 NQNFGSSVTLTKFSNPTTGERFCFLSNTDGKNDATIDLQEDGKYFVPAWSVSILDGCNKE 408

Query: 160 VYNTAKVNSRTSIFVKKE 167
           VYNTAKVNS+TS+FVK++
Sbjct: 409 VYNTAKVNSQTSMFVKEQ 426

[Close]

BLAST of CsaV3_5G013660 vs. ExPASy TrEMBL
Match: A0A5D3CWN8 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001010 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.3e-49
Identity = 103/138 (74.64%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDY+ LLDEYGN NQPK GHLKQL+ASIKL +KILTNGTRS
Sbjct: 254 YHGGTNFGRTSGGPFITTSYDYNALLDEYGNLNQPKWGHLKQLHASIKLGEKILTNGTRS 313

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI-----------AWSVSILDGCNKE 159
           +Q++G+SVTL KF NP+TGERFCFLSNTDG NDATI           AWSVSILDGCNKE
Sbjct: 314 DQNFGNSVTLTKFFNPTTGERFCFLSNTDGKNDATIDLQADGKYFVPAWSVSILDGCNKE 373

Query: 160 VYNTAKVNSRTSIFVKKE 167
           VYNTAKVNS+TS+FVK++
Sbjct: 374 VYNTAKVNSQTSMFVKEK 391

[Close]

BLAST of CsaV3_5G013660 vs. TAIR 10
Match: AT1G31740.1 (beta-galactosidase 15 )

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-28
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNF RT+   +ITT YDYD  LDE+GN NQPK GHLKQL+  +   +K LT G  S
Sbjct: 311 YHGGTNFDRTAGGPYITTTYDYDAPLDEFGNLNQPKYGHLKQLHDVLHAMEKTLTYGNIS 370

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI----------AWSVSILDGCNKEV 159
             D+G+ VT   +         CF+ N + ++DA I          AWSVSIL  C  E 
Sbjct: 371 TVDFGNLVTATVYQTEEGSS--CFIGNVNETSDAKINFQGTSYDVPAWSVSILPDCKTET 430

Query: 160 YNTAKVNSRTSIFVKK 166
           YNTAK+N++TS+ VKK
Sbjct: 431 YNTAKINTQTSVMVKK 444

[Close]

BLAST of CsaV3_5G013660 vs. TAIR 10
Match: AT5G20710.1 (beta-galactosidase 7 )

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-27
Identity = 63/139 (45.32%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGR +   +ITT YDY   LDE+GN NQPK GHLKQL+  +K  +K LT G  S
Sbjct: 294 YHGGTNFGRVAGGPYITTSYDYHAPLDEFGNLNQPKWGHLKQLHTVLKSMEKSLTYGNIS 353

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI----------AWSVSILDGCNKEV 159
             D G+S+    ++        CF+ N + + DA +          AWSVS+L  C+KE 
Sbjct: 354 RIDLGNSIKATIYTTKEGSS--CFIGNVNATADALVNFKGKDYHVPAWSVSVLPDCDKEA 413

Query: 160 YNTAKVNSRTSIFVKKECK 169
           YNTAKVN++TSI  +   K
Sbjct: 414 YNTAKVNTQTSIMTEDSSK 430

[Close]

BLAST of CsaV3_5G013660 vs. TAIR 10
Match: AT5G63810.1 (beta-galactosidase 10 )

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-24
Identity = 61/131 (46.56%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNFGRTS   FITT YDY+  +DEYG    PK GHLK L+ +I L + +L +G   
Sbjct: 298 YHGGTNFGRTSGGPFITTSYDYEAPIDEYGLPRLPKWGHLKDLHKAIMLSENLLISGEHQ 357

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI----------AWSVSILDGCNKEV 159
           N   G S+    +++ S+G    FLSN D  ND  +          AWSVSIL  C  EV
Sbjct: 358 NFTLGHSLEADVYTD-SSGTCAAFLSNLDDKNDKAVMFRNTSYHLPAWSVSILPDCKTEV 417

Query: 160 YNTAKVNSRTS 161
           +NTAKV S++S
Sbjct: 418 FNTAKVTSKSS 427

[Close]

BLAST of CsaV3_5G013660 vs. TAIR 10
Match: AT2G04060.1 (glycosyl hydrolase family 35 protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-21
Identity = 59/132 (44.70%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+G TNF RT+   FITT YDYD  LDE+GN NQPK GHLKQL+      +K LT G  S
Sbjct: 24  YHGHTNFDRTAGGPFITTTYDYDAPLDEFGNLNQPKYGHLKQLHDVFHAMEKTLTYGNIS 83

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTD------GSNDATIAWSVSILDGCNKEVYNTA 159
             D+G+ V    +         CF+ N +      G++    AW VSIL  C  E YNTA
Sbjct: 84  TADFGNLVMTTVYQTEEGSS--CFIGNVNAKINFQGTSYDVPAWYVSILPDCKTESYNTA 143

Query: 160 K-VNSRTSIFVK 165
           K +  RTS+  K
Sbjct: 144 KRMKLRTSLRFK 153

[Close]

BLAST of CsaV3_5G013660 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 98.6 bits (244), Expect = 5.7e-21
Identity = 62/150 (41.33%), Postives = 81/150 (54.00%), Query Frame = 0


Query: 40  YYGGTNFGRTSSDLFITTPYDYDELLDEYGNSNQPKLGHLKQLYASIKLEDKILTNGTRS 99
           Y+GGTNF RTS    I+T YDYD  +DEYG   QPK GHL+ L+ +IKL +  L     +
Sbjct: 298 YHGGTNFDRTSGGPLISTSYDYDAPIDEYGLLRQPKWGHLRDLHKAIKLCEDALIATDPT 357

Query: 100 NQDYGSSVTLMKFSNPSTGERFCFLSNTDGSNDATI----------AWSVSILDGCNKEV 159
               GS++    +   S G    FL+N D  +DAT+          AWSVSIL  C    
Sbjct: 358 ITSLGSNLEAAVYKTES-GSCAAFLANVDTKSDATVTFNGKSYNLPAWSVSILPDCKNVA 417

Query: 160 YNTAKVNSRT--SIFVKKECKTHIDLGSGA 178
           +NTAK+NS T  + F ++  K   D GS A
Sbjct: 418 FNTAKINSATESTAFARQSLKP--DGGSSA 444

The following BLAST results are available for this feature:

BLAST of CsaV3_5G013660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648136.1	5.0e-104	100.00	hypothetical protein Csa_021532 [Cucumis sativus]	[more]
XP_008459141.1	3.2e-50	76.81	PREDICTED: beta-galactosidase 15-like [Cucumis melo]	[more]
KAA0045403.1	7.1e-50	74.64	beta-galactosidase-like [Cucumis melo var. makuwa] >TYK11334.1 beta-galactosidas...	[more]
XP_008464891.1	7.1e-50	74.64	PREDICTED: beta-galactosidase-like [Cucumis melo]	[more]
XP_031737963.1	1.6e-49	75.36	beta-galactosidase 15-like [Cucumis sativus] >XP_031737965.1 beta-galactosidase ...	[more]

BLAST of CsaV3_5G013660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49676	9.4e-29	48.55	Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1	[more]
Q9C6W4	3.9e-27	47.79	Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1	[more]
Q7G3T8	2.0e-26	46.32	Beta-galactosidase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0330600 P...	[more]
Q8RUV9	3.3e-26	44.85	Beta-galactosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0533400 PE...	[more]
Q9SCV5	5.7e-26	45.32	Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2	[more]

BLAST of CsaV3_5G013660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8Z9	1.5e-50	76.81	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103498345 PE=3 SV=1	[more]
A0A5A7TPD9	3.4e-50	74.64	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G0...	[more]
A0A1S3CP45	3.4e-50	74.64	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103502650 PE=3 SV=1	[more]
A0A0A0M006	7.7e-50	75.36	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G650110 PE=3 SV=1	[more]
A0A5D3CWN8	1.3e-49	74.64	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00...	[more]

BLAST of CsaV3_5G013660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31740.1	2.8e-28	47.79	beta-galactosidase 15	[more]
AT5G20710.1	4.0e-27	45.32	beta-galactosidase 7	[more]
AT5G63810.1	1.9e-24	46.56	beta-galactosidase 10	[more]
AT2G04060.1	3.3e-21	44.70	glycosyl hydrolase family 35 protein	[more]
AT2G28470.1	5.7e-21	41.33	beta-galactosidase 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001944	Glycoside hydrolase, family 35	PRINTS	PR00742	GLHYDRLASE35	coord: 53..69 score: 58.48 coord: 33..48 score: 43.38
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 38..169
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 9..89 e-value: 2.2E-8 score: 35.9
None	No IPR available	PANTHER	PTHR23421:SF88	BETA-GALACTOSIDASE 14	coord: 38..169
IPR031330	Glycoside hydrolase 35, catalytic domain	PFAM	PF01301	Glyco_hydro_35	coord: 40..84 e-value: 5.1E-10 score: 39.5
IPR041392	Beta-galactosidase, beta-sandwich domain	PFAM	PF17834	GHD	coord: 93..155 e-value: 3.2E-11 score: 43.1
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 23..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G013660.1	CsaV3_5G013660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds