CsaV3_5G010550 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G010550
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 6530721 .. 6530875 (+)
RNA-Seq ExpressionCsaV3_5G010550
SyntenyCsaV3_5G010550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAAGGTGCAATAGTATTACTCTCCACCGAAAGTACTAACCAAATTTGTAAAACCAAAAATAGAGATATAGAGGATCATCATCGTCATATGTTGAGCAAAAGGAAGGGATATAGAGGATCGAACACATGCATGGAGCTGGAAATAGTACAATAG

mRNA sequence

GAAGGTGCAATAGTATTACTCTCCACCGAAAGTACTAACCAAATTTGTAAAACCAAAAATAGAGATATAGAGGATCATCATCGTCATATGTTGAGCAAAAGGAAGGGATATAGAGGATCGAACACATGCATGGAGCTGGAAATAGTACAATAG

Coding sequence (CDS)

GAAGGTGCAATAGTATTACTCTCCACCGAAAGTACTAACCAAATTTGTAAAACCAAAAATAGAGATATAGAGGATCATCATCGTCATATGTTGAGCAAAAGGAAGGGATATAGAGGATCGAACACATGCATGGAGCTGGAAATAGTACAATAG

Protein sequence

EGAIVLLSTESTNQICKTKNRDIEDHHRHMLSKRKGYRGSNTCMELEIVQ*
Homology
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BLAST of CsaV3_5G010550 vs. NCBI nr
Match: KAE8648039.1 (hypothetical protein Csa_023603, partial [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 7.9e-20
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  EGAIVLLSTESTNQICKTKNRDIEDHHRHMLSKRKGYRGSNTCMELEIVQ 51
          EGAIVLLSTESTNQICKTKNRDIEDHHRHMLSKRKGYRGSNTCMELEIVQ
Sbjct: 1  EGAIVLLSTESTNQICKTKNRDIEDHHRHMLSKRKGYRGSNTCMELEIVQ 50

The following BLAST results are available for this feature:
BLAST of CsaV3_5G010550 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648039.17.9e-20100.00hypothetical protein Csa_023603, partial [Cucumis sativus][more]
BLAST of CsaV3_5G010550 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G010550 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G010550 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G010550.1CsaV3_5G010550.1mRNA