CsaV3_5G010040 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G010040
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 5747831 .. 5748118 (-)
RNA-Seq ExpressionCsaV3_5G010040
SyntenyCsaV3_5G010040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAATCTTGGGTTCACAAGTCTTCCCCTTTGGTGGTGGCAATGGCGGCCCTCATAACTGGAGCTCGTGTTGCCGACGCGATAACTTGCAACACCATGGGGCTGAGTCCATGCATTGGTGCAATGACATCGACGGCCACCGTCCACCACTTGTTGCAGTAAGCTGAGGGAGCAACAGCCATGCTTTTGTCAGTATATGAAGAATCCAAGCTTGGGAGGTTACGTGAAATCTGCTCGAGCAAAAGCTATTATTTCCTCCTGTGGTGTTCCCTATCCCAAATGCTAG

mRNA sequence

AAAATCTTGGGTTCACAAGTCTTCCCCTTTGGTGGTGGCAATGGCGGCCCTCATAACTGGAGCTCGTGTTGCCGACGCGATAACTTGCAACACCATGGGGCTGAGTCCATGCATTGGTGCAATGACATCGACGGCCACCGTCCACCACTTGTTGCAGTAAGCTG

Coding sequence (CDS)

AAAATCTTGGGTTCACAAGTCTTCCCCTTTGGTGGTGGCAATGGCGGCCCTCATAACTGGAGCTCGTGTTGCCGACGCGATAACTTGCAACACCATGGGGCTGAGTCCATGCATTGGTGCAATGACATCGACGGCCACCGTCCACCACTTGTTGCAGTAAGCTG

Protein sequence

KILGSQVFPFGGGNGGPHNWSSCCRRDNLQHHGAESMHWCNDIDGHRPPLVAVSX
Homology
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BLAST of CsaV3_5G010040 vs. NCBI nr
Match: KAE8648022.1 (hypothetical protein Csa_023607, partial [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  KILGSQVFPFGGGNGGPHNWSSCCRRDNLQHHGAESMHWCNDIDGHRPPLVAVS 55
          KILGSQVFPFGGGNGGPHNWSSCCRRDNLQHHGAESMHWCNDIDGHRPPLVAVS
Sbjct: 1  KILGSQVFPFGGGNGGPHNWSSCCRRDNLQHHGAESMHWCNDIDGHRPPLVAVS 54

The following BLAST results are available for this feature:
BLAST of CsaV3_5G010040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648022.12.1e-26100.00hypothetical protein Csa_023607, partial [Cucumis sativus][more]
BLAST of CsaV3_5G010040 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G010040 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G010040 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G010040.1CsaV3_5G010040.1mRNA