CsaV3_5G008560 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G008560
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Thioredoxin H-type
Location	chr5: 5255060 .. 5257068 (+)
RNA-Seq Expression	CsaV3_5G008560
Synteny	CsaV3_5G008560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTTGTGCATTTTAAGGTGGTAGAACTATTATACATAAAGTTACAACTTTAGTTTCATCGATGCGTACCTGATTCTTTGATTTCTGAATGATAAAAATAAAAGTATTGTCATATATTCTTTATTGACCAAATATATGGGTTTTTTACAGAAAAAAGAAGAAGAAATTTAGAGACTTTACCCCATTTTGTATTTTATATTCTTACTTCTCACTATAAATTCAGCCATTCATCTTTGCATTGTGTTCACAGTTGCTTCTCATTTCTCCTTAATTCAAATCCCTTTTCTCTAACCCTTATTATTCTTCCCTTTGCTTTTCTTCTATATCTGAAAATAGTTATCAAAATGGCAGAAATGGGAAAAGTTATAAAATGCCACACTCTTGCCTCATGGAACCAACAACTCCTCAAAGCCCAACAATACAACAAGCTGGTATAGTTTATTACTATTGTCATATATATATTATTACTTGTTTCTCTTTTTTGGACAGCTTAATTTTTGTTAAGTTGTTTATCTAAGCAATACCTATATTCTATGGACAGCTTGTCGTGAACTTTACTGCAAAATGGTGTGGTCCATGTCATGCCATGGCTCATGTTCTTGAAGAATTAGCAAAGAAGATGAACAATGTTATTTTTTTGAAAGTAGACATTGATGAACTGAATGTGAGTTTTATTCCATCAAGGCATGTTTGGAATTACTTTCAAACTACTTAAATATATATATATATACATACATATATATTCATTTAAAAGCTTGACAAGTCATTCTAAATAACATATATTCTGTAGGTATTTTTGTTTATGTTTATAATGATCATTAAAATTGAAGGGGGTTTTTGTCACTCAAACTAAAGTATTTTTTTTTTTTCCTCCTTTTTGGAGACTGTGGCGAATGAGTTTGAAGTGACTGCCCTTCCTTCATATCATTTCTTGAAGAATGGGAGATTGGTTGAAAAATTCGAAGGTGCAAAGAAGGATGTACTGAAAAGCACTGTATCCAAACATGCCACATGAAGTAGCACTCTACCAAATGGTTTACTTTTCTTTAATCGTTTTTGTTTTTTGTTTTGGGACACCTACAAAGGATTGATTTGATCAACCATCAATAACAATGCTACAAATTCAGACATCCATAAATGATAATAAGAATTCA

mRNA sequence

ATGGGAAAAGTTATAAAATGCCACACTCTTGCCTCATGGAACCAACAACTCCTCAAAGCCCAACAATACAACAAGCTGCTTGTCGTGAACTTTACTGCAAAATGGTGTGGTCCATGTCATGCCATGGCTCATGTTCTTGAAGAATTAGCAAAGAAGATGAACAATGTTATTTTTTTGAAAGTAGACATTGATGAACTGAATACTGTGGCGAATGAGTTTGAAGTGACTGCCCTTCCTTCATATCATTTCTTGAAGAATGGGAGATTGGTTGAAAAATTCGAAGGTGCAAAGAAGGATGTACTGAAAAGCACTGTATCCAAACATGCCACATGA

Coding sequence (CDS)

ATGGGAAAAGTTATAAAATGCCACACTCTTGCCTCATGGAACCAACAACTCCTCAAAGCCCAACAATACAACAAGCTGCTTGTCGTGAACTTTACTGCAAAATGGTGTGGTCCATGTCATGCCATGGCTCATGTTCTTGAAGAATTAGCAAAGAAGATGAACAATGTTATTTTTTTGAAAGTAGACATTGATGAACTGAATACTGTGGCGAATGAGTTTGAAGTGACTGCCCTTCCTTCATATCATTTCTTGAAGAATGGGAGATTGGTTGAAAAATTCGAAGGTGCAAAGAAGGATGTACTGAAAAGCACTGTATCCAAACATGCCACATGA

Protein sequence

MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT*

Homology

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BLAST of CsaV3_5G008560 vs. NCBI nr
Match: KAE8648005.1 (hypothetical protein Csa_021493 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 3.9e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
           MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK
Sbjct: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60

Query: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 111
           VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 110

[Close]

BLAST of CsaV3_5G008560 vs. NCBI nr
Match: XP_004149946.1 (thioredoxin H-type [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 3.9e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
           MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK
Sbjct: 4   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 63

Query: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 111
           VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 64  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 113

[Close]

BLAST of CsaV3_5G008560 vs. NCBI nr
Match: XP_016903281.1 (PREDICTED: thioredoxin H1-like isoform X1 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 7.7e-52
Identity = 103/110 (93.64%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
           +GKVI CHTLASWNQQLLKAQQYNKLLVVNFTA+WCGPCHAMA VLEELAKKMNNVIFLK
Sbjct: 4   VGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKKMNNVIFLK 63

Query: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 111
           VDIDELN+VA EFEV ALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 64  VDIDELNSVAKEFEVAALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 113

[Close]

BLAST of CsaV3_5G008560 vs. NCBI nr
Match: XP_016903282.1 (PREDICTED: thioredoxin H1-like isoform X2 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49
Identity = 101/110 (91.82%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
           +GKVI CHTLASWNQQLLKAQQYNKLLVVNFTA+WCGPCHAMA VLEELAKKMNNVIFLK
Sbjct: 4   VGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKKMNNVIFLK 63

Query: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 111
           VDIDEL    NEFEV ALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 64  VDIDEL----NEFEVAALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 109

[Close]

BLAST of CsaV3_5G008560 vs. NCBI nr
Match: XP_038892916.1 (thioredoxin H1-like [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
           MGKVI CH L SWNQQLLKA+QYNKLLVVNFTAKWCGPC AMA VLEELAKKMNNVIFLK
Sbjct: 4   MGKVISCHNLGSWNQQLLKAKQYNKLLVVNFTAKWCGPCRAMALVLEELAKKMNNVIFLK 63

Query: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 110
           VDIDELN+VA EFEV A+PSY F KNG+LV+KFEGAKKDVLKSTVSKHA
Sbjct: 64  VDIDELNSVAEEFEVGAIPSYLFFKNGKLVDKFEGAKKDVLKSTVSKHA 112

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.9e-30
Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKV 61
           G+VI CHT+ +WN+QL K      L+VV+FTA WCGPC  +A  L ELAKK+ NV FLKV
Sbjct: 6   GQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKV 65

Query: 62  DIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 109
           D+DEL TVA+E+ V ++P++ FLK G++++K  GAKKD L+ T++KH
Sbjct: 66  DVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.0e-30
Identity = 57/107 (53.27%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKV 61
           G+VI CHT+ +WN+QL KA +   L+VV+FTA WCGPC  +A    +LAKK+ NV+FLKV
Sbjct: 6   GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKV 65

Query: 62  DIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 109
           D DEL +VA+++ + A+P++ FLK G++++K  GAKKD L+ST++KH
Sbjct: 66  DTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-27
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKV 61
           G+VI  HT+ +WN+ L K     KL+VV+FTA WCGPC  +A    ELAKKM  V FLKV
Sbjct: 5   GQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKV 64

Query: 62  DIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 109
           D+DEL +VA ++ V A+P++ FLK G++V+K  GAKKD L+ T++KH
Sbjct: 65  DVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-27
Identity = 54/108 (50.00%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKV 61
           G+V  CH +  WN+   K  +  KL+VV+FTA WCGPC  +A +L ++AKKM +VIFLKV
Sbjct: 12  GQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKV 71

Query: 62  DIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 110
           D+DEL TV+ E+ V A+P++ F+K+G+ V++  GAKK+ L+ T+ KHA
Sbjct: 72  DVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHA 119

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-26
Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKV 61
           G+VI CHTL  WN+++  A +  KL+V++FTA WC PC  +A V  E+AKK  NV+F K+
Sbjct: 5   GEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKI 64

Query: 62  DIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 109
           D+DEL  VA EF+V A+P++ F+K G ++++  GA KD +   + KH
Sbjct: 65  DVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy TrEMBL
Match: A0A0A0KLR8 (Thioredoxin H-type OS=Cucumis sativus OX=3659 GN=Csa_5G189900 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
           MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK
Sbjct: 4   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 63

Query: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 111
           VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 64  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 113

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy TrEMBL
Match: A0A1S4E4X3 (thioredoxin H1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502658 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.7e-52
Identity = 103/110 (93.64%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
           +GKVI CHTLASWNQQLLKAQQYNKLLVVNFTA+WCGPCHAMA VLEELAKKMNNVIFLK
Sbjct: 4   VGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKKMNNVIFLK 63

Query: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 111
           VDIDELN+VA EFEV ALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 64  VDIDELNSVAKEFEVAALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 113

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy TrEMBL
Match: A0A1S4E4Y5 (thioredoxin H1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502658 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49
Identity = 101/110 (91.82%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
           +GKVI CHTLASWNQQLLKAQQYNKLLVVNFTA+WCGPCHAMA VLEELAKKMNNVIFLK
Sbjct: 4   VGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKKMNNVIFLK 63

Query: 61  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 111
           VDIDEL    NEFEV ALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT
Sbjct: 64  VDIDEL----NEFEVAALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 109

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy TrEMBL
Match: A0A5A7U8B7 (Thioredoxin H1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00860 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.1e-43
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLK 60
          +GKVI CHTLASWNQQLLKAQQYNKLLVVNFTA+WCGPCHAMA VLEELAKKMNNVIFLK
Sbjct: 4  VGKVITCHTLASWNQQLLKAQQYNKLLVVNFTARWCGPCHAMASVLEELAKKMNNVIFLK 63

Query: 61 VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGA 97
          VDIDELN+VA EFEV ALPSYHFLKNGRLVEKFE +
Sbjct: 64 VDIDELNSVAKEFEVAALPSYHFLKNGRLVEKFEAS 99

[Close]

BLAST of CsaV3_5G008560 vs. ExPASy TrEMBL
Match: A0A1S3CMJ1 (thioredoxin H-type-like OS=Cucumis melo OX=3656 GN=LOC103502659 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.0e-39
Identity = 79/110 (71.82%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MGKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKM-NNVIFL 60
           MGKVI CHT++SW Q LLKA+QYNKL+VVNFTA WCGPC  MA +LEELAKKM NNVIFL
Sbjct: 4   MGKVISCHTVSSWKQHLLKAEQYNKLVVVNFTASWCGPCRFMAPILEELAKKMSNNVIFL 63

Query: 61  KVDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHA 110
           KVDIDEL ++A EF V+++PS+ FLKNG+LV+KF GAKK++L+ST+SKH+
Sbjct: 64  KVDIDELMSIAKEFGVSSVPSFQFLKNGKLVDKFVGAKKNLLQSTISKHS 113

[Close]

BLAST of CsaV3_5G008560 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 131.7 bits (330), Expect = 3.6e-31
Identity = 57/107 (53.27%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKV 61
           G+VI CHT+ +WN+QL KA +   L+VV+FTA WCGPC  +A    +LAKK+ NV+FLKV
Sbjct: 6   GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKV 65

Query: 62  DIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 109
           D DEL +VA+++ + A+P++ FLK G++++K  GAKKD L+ST++KH
Sbjct: 66  DTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of CsaV3_5G008560 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 120.6 bits (301), Expect = 8.2e-28
Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKV 61
           G+VI CHTL  WN+++  A +  KL+V++FTA WC PC  +A V  E+AKK  NV+F K+
Sbjct: 5   GEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKI 64

Query: 62  DIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 109
           D+DEL  VA EF+V A+P++ F+K G ++++  GA KD +   + KH
Sbjct: 65  DVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of CsaV3_5G008560 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 117.1 bits (292), Expect = 9.1e-27
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKV 61
           G+VI CHT+  W ++L  A +  KL+V++FTA WC PC  +A V  +LAKK  +V+F KV
Sbjct: 5   GEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKV 64

Query: 62  DIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKHAT 111
           D+DELNTVA EF+V A+P++ F+K G + E   GA K+ + + + KH T
Sbjct: 65  DVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

[Close]

BLAST of CsaV3_5G008560 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-26
Identity = 54/108 (50.00%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 2   GKVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKK-MNNVIFLK 61
           G+VI CHT   W  QL KA++ NKL+V++FTA WC PC  +A +  +LAKK M++ IF K
Sbjct: 6   GQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFK 65

Query: 62  VDIDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSKH 109
           VD+DEL +VA EF V A+P++ F+K G +V+K  GA K+ L++ + KH
Sbjct: 66  VDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of CsaV3_5G008560 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-22
Identity = 47/105 (44.76%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 3   KVIKCHTLASWNQQLLKAQQYNKLLVVNFTAKWCGPCHAMAHVLEELAKKMNNVIFLKVD 62
           +V+K  + A W     + ++ NKLLVV+F+A WCGPC  +   +  +A K N+V F+K+D
Sbjct: 26  RVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLD 85

Query: 63  IDELNTVANEFEVTALPSYHFLKNGRLVEKFEGAKKDVLKSTVSK 108
           +DEL  VA EF VTA+P++  +K G+ +E+  GAKKD L+  VSK
Sbjct: 86  VDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

The following BLAST results are available for this feature:

BLAST of CsaV3_5G008560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648005.1	3.9e-56	100.00	hypothetical protein Csa_021493 [Cucumis sativus]	[more]
XP_004149946.1	3.9e-56	100.00	thioredoxin H-type [Cucumis sativus]	[more]
XP_016903281.1	7.7e-52	93.64	PREDICTED: thioredoxin H1-like isoform X1 [Cucumis melo]	[more]
XP_016903282.1	4.7e-49	91.82	PREDICTED: thioredoxin H1-like isoform X2 [Cucumis melo]	[more]
XP_038892916.1	1.3e-46	87.16	thioredoxin H1-like [Benincasa hispida]	[more]

BLAST of CsaV3_5G008560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	2.9e-30	55.14	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	5.0e-30	53.27	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q07090	1.4e-27	53.27	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P29449	2.3e-27	50.00	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39241	1.2e-26	46.73	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of CsaV3_5G008560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLR8	1.9e-56	100.00	Thioredoxin H-type OS=Cucumis sativus OX=3659 GN=Csa_5G189900 PE=4 SV=1	[more]
A0A1S4E4X3	3.7e-52	93.64	thioredoxin H1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502658 PE=4 SV=1	[more]
A0A1S4E4Y5	2.3e-49	91.82	thioredoxin H1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502658 PE=4 SV=1	[more]
A0A5A7U8B7	4.1e-43	90.63	Thioredoxin H1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3CMJ1	8.0e-39	71.82	thioredoxin H-type-like OS=Cucumis melo OX=3656 GN=LOC103502659 PE=4 SV=1	[more]

BLAST of CsaV3_5G008560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	3.6e-31	53.27	thioredoxin H-type 1	[more]
AT1G45145.1	8.2e-28	46.73	thioredoxin H-type 5	[more]
AT5G42980.1	9.1e-27	47.71	thioredoxin 3	[more]
AT1G19730.1	2.7e-26	50.00	Thioredoxin superfamily protein	[more]
AT5G39950.1	2.3e-22	44.76	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..110 e-value: 8.9E-35 score: 121.3
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 2..109
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 2..109
None	No IPR available	CDD	cd02947	TRX_family	coord: 15..105 e-value: 4.30798E-30 score: 101.096
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 6..106 e-value: 1.7E-25 score: 89.0
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..110 score: 12.091478
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 28..46
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G008560.1	CsaV3_5G008560.1	mRNA