CsaV3_5G008300 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G008300
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 5011175 .. 5011644 (+)
RNA-Seq ExpressionCsaV3_5G008300
SyntenyCsaV3_5G008300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGACGGGAAGAAGAAGGGGGTGGGGGGCCGGTTTGTTTATCTCTTTTTTAACTTTGTACGATAAGATTTTTGACAGTAGTCACTGTAGAATCACAGTCTATGAAAGCGGTTTAGGCAGAGAAAGTTTTTTCTTGTCCCCCACTTGCAACTCTGCTCTGTTTTGCTCAGTTCAAGTTGAATTGATGAAGGGCAGGCTGTACATTCGGTTTGTGGTTAAGTTCTTGGGCGGCAAGTTTTTATGGGGATTGATCTTGAAGAAAAGGGTACGTGTAGGGCTATGATTTGGAGGAGAATGGGGGAAGTGTGGGGTTCGAGGTCACAGTCTGAGAGTACCGACAAAGGTATTGAAAGGGGGCCAAAGCCAAAGAGGGGTTAAAGTTTTTTGGATTGGGGATTATTGTGAGGATGAAGAAGAAGAAGAAGATCACCGCCAAAAAGCAAAGGAGGGGTTTAAAAGCAAATAG

mRNA sequence

ATGGAGAGACGGGAAGAAGAAGGGGTTCAAGTTGAATTGATGAAGGGCAGGCTGTACATTCGGTTTGTGGTTAAGTTCTTGGGCGGCAATCTGAGAGTACCGACAAAGGTATTGAAAGGGGGCCAAAGCCAAAGAGGGGTTAAAGTTTTTTGGATTGGGGATTATTGTGAGGATGAAGAAGAAGAAGAAGATCACCGCCAAAAAGCAAAGGAGGGGTTTAAAAGCAAATAG

Coding sequence (CDS)

ATGGAGAGACGGGAAGAAGAAGGGGTTCAAGTTGAATTGATGAAGGGCAGGCTGTACATTCGGTTTGTGGTTAAGTTCTTGGGCGGCAATCTGAGAGTACCGACAAAGGTATTGAAAGGGGGCCAAAGCCAAAGAGGGGTTAAAGTTTTTTGGATTGGGGATTATTGTGAGGATGAAGAAGAAGAAGAAGATCACCGCCAAAAAGCAAAGGAGGGGTTTAAAAGCAAATAG

Protein sequence

MERREEEGVQVELMKGRLYIRFVVKFLGGNLRVPTKVLKGGQSQRGVKVFWIGDYCEDEEEEEDHRQKAKEGFKSK*
Homology
[Close]
BLAST of CsaV3_5G008300 vs. NCBI nr
Match: KGN50571.1 (hypothetical protein Csa_021421 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MERREEEGVQVELMKGRLYIRFVVKFLGGNLRVPTKVLKGGQSQRGVKVFWIGDYCEDEE 60
          MERREEEGVQVELMKGRLYIRFVVKFLGGNLRVPTKVLKGGQSQRGVKVFWIGDYCEDEE
Sbjct: 1  MERREEEGVQVELMKGRLYIRFVVKFLGGNLRVPTKVLKGGQSQRGVKVFWIGDYCEDEE 60

Query: 61 EEEDHRQKAKEGFKSK 77
          EEEDHRQKAKEGFKSK
Sbjct: 61 EEEDHRQKAKEGFKSK 76

[Close]
BLAST of CsaV3_5G008300 vs. ExPASy TrEMBL
Match: A0A0A0KS89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182760 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MERREEEGVQVELMKGRLYIRFVVKFLGGNLRVPTKVLKGGQSQRGVKVFWIGDYCEDEE 60
          MERREEEGVQVELMKGRLYIRFVVKFLGGNLRVPTKVLKGGQSQRGVKVFWIGDYCEDEE
Sbjct: 1  MERREEEGVQVELMKGRLYIRFVVKFLGGNLRVPTKVLKGGQSQRGVKVFWIGDYCEDEE 60

Query: 61 EEEDHRQKAKEGFKSK 77
          EEEDHRQKAKEGFKSK
Sbjct: 61 EEEDHRQKAKEGFKSK 76

The following BLAST results are available for this feature:
BLAST of CsaV3_5G008300 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50571.12.2e-34100.00hypothetical protein Csa_021421 [Cucumis sativus][more]
BLAST of CsaV3_5G008300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G008300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS891.1e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182760 PE=4 SV=1[more]
BLAST of CsaV3_5G008300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G008300.1CsaV3_5G008300.1mRNA