
CsaV3_5G005330 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAATAATTCAAGGAAACGAAAGAAAAATGGATGTTTCGGAGGCTACAATCCTCCAATCTTAAGGACAACAACAAAGGAAGAGAACTTAACACTTCCATCAAATTTGATGCTTGTGAAAAGTTGGTCTCACTCAACCAAAGAAGTTGTAAGGATGATAGGTGATACATCCATTCAACATCATCATTATATTGAACCCAATTTGGATTTAAGTTGGAATGACTTCGACTATACTCAAATCCCAAGCTTTTTAGGTTCAATGGTTGAATTAACATATCTTAATCTTTCTCATGCATCCTTTGCAGGAAAAGTTCCTCCTCATTTAGGAAATCTGAGTATAGTCGAAGTCATTCCAACTTAAATCCAAATAATTTAAGTATTTCAACTCAAGCAAACTAGAATCAATAGAATTATTGCTATACAAAGGTCCTGATACCGATAAGAAGAGTAAGTCGACCTGAATATCCCATCGAAGATCAATGATAGTAACATGTCCAGTGGTTTGATTGCAACCCACTCCTTTCCAATTACAGCAATCAGTTCCATTATTCCAGGAAGCCAATCGAAGAGAAGGATCATAATAAAAACTATTCTTGAATTGAAGAAGAGCTTCACGCTCCTTGTGGATGCAAGCTGCTGCAGTTATGGAGAAACAAAAATGGAGGTGTAGAAGAAGCAGTATCATCCACAACAATAATACAATTGAACTTTTTTCTGAAACTAATTTCCACATTTTGCTTACAATTGAATTGAAAGAACTGAGTAGTGTATGAAATTTGGCAATGAAAAGCAATAATATATATACTACTTTTAAATTTTCTTTACCTAGTCGTGATCATGTCTTTCTTTAATAATTTCTTTAAAATATTTTATGTTTAAAATTTTAAAATTTATTTATAACTTGTTTCAACTTTGATAGCTGGTTGAATTTGGAATACTTGAAAATGAAATTGATGATGATCATATTATAAAGAATGTTATCCAAGTCAGTCCTACATCAGCTTGA ATGAAGAATAATTCAAGGAAACGAAAGAAAAATGGATGTTTCGGAGGCTACAATCCTCCAATCTTAAGGACAACAACAAAGGAAGAGAACTTAACACTTCCATCAAATTTGATGCTTGTGAAAAGTTGGTCTCACTCAACCAAAGAAGTTGTAAGGATGATAGGTGATACATCCATTCAACATCATCATTATATTGAACCCAATTTGGATTTAAGTTGGAATGACTTCGACTATACTCAAATCCCAAGCTTTTTAGGTTCAATGGTTGAATTAACATATCTTAATCTTTCTCATGCATCCTTTGCAGGAAAAGTTCCTCCTCATTTAGGAAATCTGAGTATAGTCGAACTGGTTGAATTTGGAATACTTGAAAATGAAATTGATGATGATCATATTATAAAGAATGTTATCCAAGTCAGTCCTACATCAGCTTGA ATGAAGAATAATTCAAGGAAACGAAAGAAAAATGGATGTTTCGGAGGCTACAATCCTCCAATCTTAAGGACAACAACAAAGGAAGAGAACTTAACACTTCCATCAAATTTGATGCTTGTGAAAAGTTGGTCTCACTCAACCAAAGAAGTTGTAAGGATGATAGGTGATACATCCATTCAACATCATCATTATATTGAACCCAATTTGGATTTAAGTTGGAATGACTTCGACTATACTCAAATCCCAAGCTTTTTAGGTTCAATGGTTGAATTAACATATCTTAATCTTTCTCATGCATCCTTTGCAGGAAAAGTTCCTCCTCATTTAGGAAATCTGAGTATAGTCGAACTGGTTGAATTTGGAATACTTGAAAATGAAATTGATGATGATCATATTATAAAGAATGTTATCCAAGTCAGTCCTACATCAGCTTGA MKNNSRKRKKNGCFGGYNPPILRTTTKEENLTLPSNLMLVKSWSHSTKEVVRMIGDTSIQHHHYIEPNLDLSWNDFDYTQIPSFLGSMVELTYLNLSHASFAGKVPPHLGNLSIVELVEFGILENEIDDDHIIKNVIQVSPTSA* Homology
BLAST of CsaV3_5G005330 vs. NCBI nr
Match: KAE8647941.1 (hypothetical protein Csa_000015 [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 9.0e-77 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. NCBI nr
Match: XP_016903706.1 (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Cucumis melo]) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-11 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. NCBI nr
Match: KAA0055092.1 (putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-11 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. NCBI nr
Match: XP_004143731.2 (receptor-like protein EIX2 [Cucumis sativus] >KAE8647926.1 hypothetical protein Csa_000442 [Cucumis sativus]) HSP 1 Score: 80.1 bits (196), Expect = 1.7e-11 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. NCBI nr
Match: XP_016903721.1 (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Cucumis melo]) HSP 1 Score: 79.0 bits (193), Expect = 3.9e-11 Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy Swiss-Prot
Match: Q6JN46 (Receptor-like protein EIX2 OS=Solanum lycopersicum OX=4081 GN=EIX2 PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07 Identity = 27/76 (35.53%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy Swiss-Prot
Match: Q6JN47 (Receptor-like protein EIX1 OS=Solanum lycopersicum OX=4081 GN=EIX1 PE=2 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 5.1e-06 Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy Swiss-Prot
Match: Q9SRL2 (Receptor-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=RLP34 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.6e-05 Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy Swiss-Prot
Match: Q9LJW7 (Receptor-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=RLP43 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.6e-05 Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy Swiss-Prot
Match: Q9ZUK7 (Receptor-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RLP18 PE=2 SV=3) HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04 Identity = 33/96 (34.38%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy TrEMBL
Match: A0A5A7UGY7 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00180 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 6.4e-12 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy TrEMBL
Match: A0A1S4E635 (probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Cucumis melo OX=3656 GN=LOC107990325 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 6.4e-12 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy TrEMBL
Match: A0A0A0KKW7 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G168740 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 8.4e-12 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy TrEMBL
Match: A0A1S4E650 (probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Cucumis melo OX=3656 GN=LOC103504704 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11 Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. ExPASy TrEMBL
Match: A0A0A0KL22 (Serine/threonine-protein kinase bri1 OS=Cucumis sativus OX=3659 GN=Csa_5G167740 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11 Identity = 38/64 (59.38%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. TAIR 10
Match: AT2G34930.1 (disease resistance family protein / LRR family protein ) HSP 1 Score: 61.2 bits (147), Expect = 7.8e-10 Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. TAIR 10
Match: AT3G28890.1 (receptor like protein 43 ) HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06 Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. TAIR 10
Match: AT3G11010.1 (receptor like protein 34 ) HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06 Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. TAIR 10
Match: AT3G28890.2 (receptor like protein 43 ) HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06 Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of CsaV3_5G005330 vs. TAIR 10
Match: AT2G15080.1 (receptor like protein 19 ) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05 Identity = 38/103 (36.89%), Postives = 50/103 (48.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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