CsaV3_5G004940 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTAAACTTATACATATAAGGATTTTCAGAGTATTGGTATATATATATGAATAAATAAGTATTGGAATATGGGAGTATTTTTCATAAACTATTAATAGTAGATCATATTATGAAAGAATGGTACAAATATTCCTCGATAGATTTAGTTATATTTACACTATAATAATAAAGGTGATAGACTTGCATGTTTGATAGAATTTGACAAATTTTTTAAAATGTTGTTATAAAGTTAATTATTTTAAATTTAACCGTTAAATTTACATCTATACCTAAATTCATTTTACCAATATGGGCCTCACAAAATGTCTCATCTCTACAGCTGGGTCCCACCAACAACCGGTTCAATCCGGGTCAGACCGTTTTTAACAACCACCGACCAAACTAATTTAAAATAACGAAGTAAACAAACCAAAATCCAAAGAAGAGAAAGAAGAAAAAAGATTGAAAACCGGTCCAAGTCAGTTGGTTCATCTTGGTTTCTCAAAATTTCCATTATTATAAATTTAAGAAATAGAAAGCGAGAGAGAGAGAGGGGTGTGGAGCCAAAATCATAATGGAAAGTGCTTTTAGTAAAACAAACCACTTTTACGTTTTGCTTTATAAAAGGTTTATAAGGTTAGAATTCGGAAGCACTTTCCGTCCAACTGCTTGACTGGAAAGCACATTACAAAAAAAACTGTTATACCAAACGTCCATCCCCCATTCTAATTTGATGCTTCCTCCTCCTCCATTCTCTTCCGCCCTAATTGGTCACTTCTTCTTCTTCTTCTTCTTCCTTTAATTGCTTTAAATCAAATCTATCACTGCCTTCCTCTACTTTGCCTTCACCTACACCATTGTTGACTCTCTCTTAAGGTACGCGTTTTCTTTTTCAATTTTATCATCTCTTTAACCTTGATTTTGAATGTTTTTCCAGAAATTCCATTCTGTTTTGCTGTCATGTTGTAATTAGAAGTGAACTGTATCCCAAAATCTTACTCATCACATTCCAATTGTGTATTGTTTCTCTCTTAGTATTTAACTTTATTTTGCTTTTTACTATTGCAATTCTCTTTTATTTTGATTCGAACACTTTTTTTTATCCAATTTCTTAACGATGGTCATCTGTTAGAATGTTTAATCAACTTTGTTGTGATAGTCAAAATGTGGAGTAACATCTTCGTTTACTTACTTAAATAGGTTAATTAAAGTAACCTAGCTATAATTAAACATGTCCATCGCTTTTATTGGGATTAAAAACTGTCTATTAATAGGATGCAAGGGTTATGGCCTTTAATATGCTACTTGCTTCTCATTTCTGAATTTAGAACCTTGGTGTCTTTTGTCGAAGAAGATCTTACTTTAAACTTTTTGGAGGTGTTTAGAGAGTAATTAGGATTACTGAAAATCGAAAACATGTTGGAATGTGTGTGAAATACAAATGTGATCGTAAAACGTGATAGAAAGTATGATTTAACTTAAATCTGTCAGACTTAATGAGTTTTTAGTAACAAGTTAGACTCAAAACGCCCAATTCAAATATAGAATTTCTATTACATTCTATTTCAATGCAATTTCGGGTGTGCAAACACTTCATTCTTATTTGTTATAGTTTAATATCATTTTTAAAACAACATCACCTTTGTTTCTCTTTGTTTAAATTCCTTGGCATTGCTTTAAGTAATAAGACTGTGTAGTCCTTTCTATCAATAGAGAGAATTTGAACATATTCTGTAATACATATTTTGTAAACGGGGATTTTTTGTGGATCTTTAGTGACAATGAAACTGAAAAAGTACATCAGTTACTTACCATTTTTCTACGGTTTATTTGAAATTCAAGGAAAAAGTATGACTGCTTCTGGATCACAAGGAAAATAGTATCATTTCTTGCCTTTTACATTTCAAATTTGTATATCTCACTTTTTTCTTTAGTCTTAATCTACGTACAATTGATTCAGATACTTTTTTTTGTTGATGTATTAGAATGTCCAAAACTACTAGTGATGAAAAAGAGAGGCAAACAAAGGCCATTTGGGATGATGTTACTGTCGATTCATTCATAAATGTTTGTGTTACCGAGACATTAAATGGGCATAGACCCCGTGGTTATTTTACGAAAATTGGATGGAGGAATGTAGTTAAGAACTTCTATGAAAAGACAGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACACTGAAGAGAGATTGGCAAGTTTGGAATGATTTGATTGGAAATGAAAAAGAAATAGGATGGGACCCTTTGAGGCAAACCATTGATGCAACTAGTCAATGGTGGGATCACAAATTAAAGGTAATATTCCATGGATCTGTATTGATTTTAATGGTAGATACGTCCCTATCACCATTTTTTTTATATTTTTATTATAGGTTCTTCCTGAGGCAGCCAAGTTTCGTGCAAAAGGATTGCAAAGTTTGGAGCTCTTGAACATTCTTTTTAAAGGTGTTGCAATTAATGGAGGAGCTTGGGCCCCAAACCCATCTCAAGTTGTTTTACGCAAGGAAAGTGATGAGGTTGAAGAAGATTATAATGAGGACACCATAGGAGATACAAAGTTCAACGAGAATGAGTTTAACAATGTTGAAAGTAACACTAATGAAGTTAATACTAGTGCAACTCATACTCAAGAGAGTGAGAAAAGGAGGAAAAGAGTAGATTCAAAGGTTGGATCACCTTCTAGGTTGTTTGATGCATTAGATCGTCTTTCCGATGTTATAGAATATAGAAAAAGAGATTTACCAGGATGTAGTACTCTCGAAGTAATGGAAACTTTAAGAAGTTTGCCTGGGATTATAGAAGGCGATGAGTTGTATATGAAGGCTGCAGATATACTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCACTACAAAAGCCAGCAATACAAATTACATGGCTTAAGCAAAAAAGAGTTTGACATTATAGTAAATTGATAATAGGATTGTAAATTTTCTAAGCCTTAGAGAAAAGAAAAGTGAGTCTTTGCCTTGTTTTGTGTTTTAAACGTCATTGGATGTCTTTGTCTAGTTAGATATAATTTTATTATGATTTTGATTAAATTTGTAAGATGGTTGCTAGTAGTATCTTTTTTTAGATGCTCATGACACCAAATTTGATGATTTTGTTTGTGGACTATTTCAAAATATATAATATAGAATCTTGAAAACTTATCCATGTAATTTGTAATTTGTTATCCATGTAATTTGTTAGAAGATTTTGAAATAAAAGACAAGTAGAGTGTCCACGACTCATAGAAGTTGTTTAAAAAGCTAAAGTGTAAATAAAATTATTCGAAATGAAAGAAGTTTTTAGAAAGCTTGAGTGTAAATAAAATTATTCGAAATGAAAGAAGTCTTGAAAAATAGGGTGGGATCGAAGAAAAACAAAAGTGAAATTAAACAAAATTGTTGGAATGAAATGAATTTAAATTGAGAAAAAGAAAAATAAAAAAATCAAAGAGAAAAAAGTATCTTTAAAGTTATTAGAAAAAAGTATTAAATTTGATATCTAAGACTAAGGAGTCCTATATGCTACACATCAAAATTTTAGATTTGATACCTCCACAAAAATGATGAATCAACATCCATAGAGAAGCAAAAATCTCATCTTCCCTTTGTAGAAAAATAAAAAATCTGTCCCAATCCATTCTAAAACTATGCTTATCTATTTACATACCCTATTTTCATACGCCCTTTATTAGGCAACTTCACTCCACGCCTATTACGAAACATTTTCCACCAATTCAATTTCTTCACACCATTCTTCTTCCCATATCTCATCCCTTTAAACTCTTTCCTTTTCATGGCTTTTGACCTCACATGGCTTCTTAGCCCTTCAGCAAGTGCCTCAAATTTCCTCACTTGTTTCTTATCACACACACTTCGAACGGCTCTGTTCTTTACCTTCTCATACTTATCTTCTTTACTTACTACTGATCCTCTCTTCTCTTTGTGATTGAAGATCTTACCTAGCTGCTTCCACATGAAGTTATGGCTATTGTGGTGATGGTGGTGATGATGATGGTGGTGGTGAAAGATTACACCAAGTTTGTTTTTGAGTTGCTTGAATCGTCCTACTCTTTGTTTCGACTCTTTCTTCCCATGCTTGGTATTGAATGTTTTCATCGAATATGTGCTACTTGATTTTGAATCTGTTGTTGAGGAATCGTCTTGGTGACTTGGGGAAGAAGAGTCGTAGTCATCATTGTCAACGGTTTCACTTTCTGTGTTTTGTTGTGTTGTCCAACTTGAAGAAGAAGAAAAGGCTGATTCAAACTCAGAGTTCGAGGATTCTGATTCTTGTTGTGGAGGTAAATGGGTGTTGTTATAAGTATGTTCCTTTCTTACTTCTCTTGAGGGATGATGATCCAGCAATGTTGGCCCCATTACCATGTGACCATATAGACTTTGGTTCTTCTTTACTTGTTTACTAGTTTGATCCAATTTCATGGCAGGCCTGAAGGTGGCGGCCTTGGATCCTACTGAAGTACATCCAGATTTAGTCATTGGATTTACAACTTTGTGTTGATTAGGTATTACATGGGTTTCAATGATTGGAGGTTTCATTATGGTCTCATCATTTCCTTGACTCCGAGGTATTCTGAAACCATGAACGAACTCGGAACTATGCTGCGTCTCTATTGGATTAACTGGCTTAGTAAACCCTGTCCTTAAAGTTGAGTGATCTGTTTTTGAGTGAACTTTCTGTTGGTTTAATGTCTCATTCCTATGAAGAACACACTGGCAATTGCCTCTTGTTTTCCTACTTTGGCTTGTGCAATGTTGTAGGGACAAAATGTGGAGTTCAATTCTTCTGAGTGCTGAAATAATACCATGAGGTAAATCATTAAAAGCAGTATTTGAAGCTGAGGCTCTATCCCTAATGGGGTTCTGTTCAAACTTTGGATTTTCCATTTTCCTTGCAGTTTGATTGTGTTTCATCCATTCAACAACTTTCTTGTCTACTGGCTTTGTCTGTTTGTCATCTTTGTGTAGAAAATTGTAAAGAATATTAGAGCTTGCTGCCAAGATCTGTACAAAATCAAAAGAGAACATAACGTTGAACATGGTTTTTAGTTCAAAAAATGGTTTTCATGGAGAATGAAAAACAAACCTTTGAGAGAACCTCCAAAACTCCTGAAGTAGCATCATCAAGCAAGCGCTTCAATAGAATCTGTGCCCTTTCATCAAGCTGCTTTGATAAGAAACCCAAACCACAACAGTCAAATATTCAAGTACAAAGCTCACTCATACAGAGTCTTGATGATAAACTAAATCCATCTAAGAAGAACTGATCTGCTAGTTCAGTGCAATAGTCTCATGCTTGAACCTCTGACCTCATAGACCAATCACGGACCAAAGCTCACTTTGGCTAATTATTTCGAGCACTATTATAATGATTGAACAACTCTAAAGTAAAAAGGCAACTAGACTGAGAACGAGAAGAGTAACTTGCGAAAGCTTACAAGTTCAGAATTTGTATCTCGCAAACAAATCTTCAAGAGAAGGATGTATAATTCCCTCAGAGCTAGGAGATCAAGGTATAACTCATCAACTTCCATATTGTCTGATAAACTACATGCCAAGTACTCAAGGTTTAGAATAAACTCAACTCAGGTACCAACTAATGAAAAGTAATGAGAATCCAACTGATAATTTGATCATCAAAAAGCTCAAACCCTATACAAGAGTGGCAAATTACTACTAATATAACCTGGCCATAACAAATCAAAGACTCTAGAACAAAACACTCAAGTTCCCAAATTGAAATAATCAAATCCACTTCACCCAAGTACAATGTTAACAATTGAACTTTTCCGTAAGTTAATCTCATACTGATTTGGTAACCAACCGAGCATCCGCTGTTTCGATGTGCTAGAGCTGATCAAAATTGGTTTACCATTTTTCTTATTAGGAAATAACTTGAATTGTCATTCTTTGATTGTCTATTATGGTTTCAAGTTCAAAGGTTCGTGTCAATATCTCACAAAAAAGGATGTTTAAGCAAGCTTGTTTAGGCAATTTGAGGACCCAAAGAACTTCTCAGAGTTTGTTTGTCATTTCCATGATTTCGATGTAAACAAAACGAAAAATATGAAGGAGATTTAGAATAACCCGAACTTAATACTCAATTACTATTGGGTAACTTATTTTATCGACCATTTATTGCTATCTTACATCAATCTAGTTTTATATATAATGAAATCAACATCAATGAATTCACTAATGTTTACGGTTTAGATTTGTCCAGTTGTTAACTCGTGATTAAAATCTCGATGATCCATTGGAGATGGCTTGGCTTCTTTTCTTACATCAAGAATCATATAACGAACGACTCATTCCTCATTCCCTCTCAAGGCTCTTCTCTATAGTTTTCATTCTGTTTGGAGTAGTTGTTGTCAAATTAGAGAAAAGAGATTAATTTTGATTGGTCTTTTGGTGGTACGGAATTCCAAATTGCTGGAGAATCATGGCAATTCACTGTTCCCTCTTAAACCCAAAAACTAATCGATTCGTATCCAGGATTGGCAAAAACAGCCCTCCAATGAAAACACATTGTACTCAAAACAAAAGTTCTAAATAAAACTAACTTTCAGTTTGAAAAAAACCAAGAGAGAAAATCGTGTAAAATAAAAACAAGAGATCGAGATTTGAGCATTTAAAAAAGAAATGGATAGGAGAAGGAGTAGATTCAGAAGCTACACATAACATCAAAAGATAAACGAATAGATTATCTCAGATCAAGTGTTGGATTAATGGTATTTGCTTCATCCTCATCTACATACACATTCGTATAAACAACGTTGCGAATGAAAATTAAAAAGTAAATCATACGAAACGAAACGGAAATCATGAAAACGAACAGAAAATGAGAAGAAACTCACAAGAAGAAAGATCATTGAGGCCAAAATAGATGGAAAAAGAAGAAAGTTGCGGAAAAGGAATTGTAACCATTGAAGAAAATGGAGGAAAGGGGCGGGAGCGGGAGAGGGGGTTGCTGACGTTTAGCGACGGGCCGCTTGATGTATTTATAGGGAGCCATGATTTTGCCCTAATTCTTTTCTATCACGTGCTCAGTCCGTGACCCACTCCATGCCCTCTCCCAAGTGAAACGTCGCCGTTTTTATGTTATTTTATTTACCATTATTGTTTTACAAGTTTTTTCTCTTTTATATAACTTATCATTTTGTTCTTAGATTTGTTTAGTTTTTAGAAAGTAATTTAAAATTATATTTTAGTGTATATATGTAAAATATTTTAGTTTATTTTGTTATATATTTAAATAAAAAAGTTTTAAAAAACAATTCTTTT ATGTCCAAAACTACTAGTGATGAAAAAGAGAGGCAAACAAAGGCCATTTGGGATGATGTTACTGTCGATTCATTCATAAATGTTTGTGTTACCGAGACATTAAATGGGCATAGACCCCGTGGTTATTTTACGAAAATTGGATGGAGGAATGTAGTTAAGAACTTCTATGAAAAGACAGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACACTGAAGAGAGATTGGCAAGTTTGGAATGATTTGATTGGAAATGAAAAAGAAATAGGATGGGACCCTTTGAGGCAAACCATTGATGCAACTAGTCAATGGTGGGATCACAAATTAAAGGTTCTTCCTGAGGCAGCCAAGTTTCGTGCAAAAGGATTGCAAAGTTTGGAGCTCTTGAACATTCTTTTTAAAGGTGTTGCAATTAATGGAGGAGCTTGGGCCCCAAACCCATCTCAAGTTGTTTTACGCAAGGAAAGTGATGAGGTTGAAGAAGATTATAATGAGGACACCATAGGAGATACAAAGTTCAACGAGAATGAGTTTAACAATGTTGAAAGTAACACTAATGAAGTTAATACTAGTGCAACTCATACTCAAGAGAGTGAGAAAAGGAGGAAAAGAGTAGATTCAAAGGTTGGATCACCTTCTAGGTTGTTTGATGCATTAGATCGTCTTTCCGATGTTATAGAATATAGAAAAAGAGATTTACCAGGATGTAGTACTCTCGAAGTAATGGAAACTTTAAGAAGTTTGCCTGGGATTATAGAAGGCGATGAGTTGTATATGAAGGCTGCAGATATACTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCACTACAAAAGCCAGCAATACAAATTACATGGCTTAAGCAAAAAAGAGTTTGA ATGTCCAAAACTACTAGTGATGAAAAAGAGAGGCAAACAAAGGCCATTTGGGATGATGTTACTGTCGATTCATTCATAAATGTTTGTGTTACCGAGACATTAAATGGGCATAGACCCCGTGGTTATTTTACGAAAATTGGATGGAGGAATGTAGTTAAGAACTTCTATGAAAAGACAGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACACTGAAGAGAGATTGGCAAGTTTGGAATGATTTGATTGGAAATGAAAAAGAAATAGGATGGGACCCTTTGAGGCAAACCATTGATGCAACTAGTCAATGGTGGGATCACAAATTAAAGGTTCTTCCTGAGGCAGCCAAGTTTCGTGCAAAAGGATTGCAAAGTTTGGAGCTCTTGAACATTCTTTTTAAAGGTGTTGCAATTAATGGAGGAGCTTGGGCCCCAAACCCATCTCAAGTTGTTTTACGCAAGGAAAGTGATGAGGTTGAAGAAGATTATAATGAGGACACCATAGGAGATACAAAGTTCAACGAGAATGAGTTTAACAATGTTGAAAGTAACACTAATGAAGTTAATACTAGTGCAACTCATACTCAAGAGAGTGAGAAAAGGAGGAAAAGAGTAGATTCAAAGGTTGGATCACCTTCTAGGTTGTTTGATGCATTAGATCGTCTTTCCGATGTTATAGAATATAGAAAAAGAGATTTACCAGGATGTAGTACTCTCGAAGTAATGGAAACTTTAAGAAGTTTGCCTGGGATTATAGAAGGCGATGAGTTGTATATGAAGGCTGCAGATATACTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCACTACAAAAGCCAGCAATACAAATTACATGGCTTAAGCAAAAAAGAGTTTGA MSKTTSDEKERQTKAIWDDVTVDSFINVCVTETLNGHRPRGYFTKIGWRNVVKNFYEKTGRNYGYKQLKNKWTTLKRDWQVWNDLIGNEKEIGWDPLRQTIDATSQWWDHKLKVLPEAAKFRAKGLQSLELLNILFKGVAINGGAWAPNPSQVVLRKESDEVEEDYNEDTIGDTKFNENEFNNVESNTNEVNTSATHTQESEKRRKRVDSKVGSPSRLFDALDRLSDVIEYRKRDLPGCSTLEVMETLRSLPGIIEGDELYMKAADILIKRENREMFVALQKPAIQITWLKQKRV* Homology
BLAST of CsaV3_5G004940 vs. NCBI nr
Match: XP_004143736.1 (L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740844.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740845.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >KGN50325.1 hypothetical protein Csa_000493 [Cucumis sativus]) HSP 1 Score: 596.3 bits (1536), Expect = 1.5e-166 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. NCBI nr
Match: XP_008436966.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo] >KAA0055085.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 571.6 bits (1472), Expect = 3.9e-159 Identity = 282/294 (95.92%), Postives = 287/294 (97.62%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. NCBI nr
Match: XP_038874429.1 (L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874430.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874431.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874432.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida]) HSP 1 Score: 526.9 bits (1356), Expect = 1.1e-145 Identity = 260/294 (88.44%), Postives = 274/294 (93.20%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. NCBI nr
Match: XP_022159819.1 (L10-interacting MYB domain-containing protein-like [Momordica charantia] >XP_022159820.1 L10-interacting MYB domain-containing protein-like [Momordica charantia]) HSP 1 Score: 480.3 bits (1235), Expect = 1.2e-131 Identity = 238/294 (80.95%), Postives = 265/294 (90.14%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. NCBI nr
Match: XP_022929169.1 (L10-interacting MYB domain-containing protein-like [Cucurbita moschata] >XP_022929170.1 L10-interacting MYB domain-containing protein-like [Cucurbita moschata]) HSP 1 Score: 469.5 bits (1207), Expect = 2.1e-128 Identity = 241/301 (80.07%), Postives = 265/301 (88.04%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.1e-31 Identity = 88/285 (30.88%), Postives = 144/285 (50.53%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. ExPASy TrEMBL
Match: A0A0A0KKV6 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167170 PE=4 SV=1) HSP 1 Score: 596.3 bits (1536), Expect = 7.1e-167 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. ExPASy TrEMBL
Match: A0A5A7UN70 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00110 PE=4 SV=1) HSP 1 Score: 571.6 bits (1472), Expect = 1.9e-159 Identity = 282/294 (95.92%), Postives = 287/294 (97.62%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. ExPASy TrEMBL
Match: A0A1S3AT15 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103482538 PE=4 SV=1) HSP 1 Score: 571.6 bits (1472), Expect = 1.9e-159 Identity = 282/294 (95.92%), Postives = 287/294 (97.62%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. ExPASy TrEMBL
Match: A0A6J1DZU8 (L10-interacting MYB domain-containing protein-like OS=Momordica charantia OX=3673 GN=LOC111026126 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 5.7e-132 Identity = 238/294 (80.95%), Postives = 265/294 (90.14%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. ExPASy TrEMBL
Match: A0A6J1EN01 (L10-interacting MYB domain-containing protein-like OS=Cucurbita moschata OX=3662 GN=LOC111435828 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 1.0e-128 Identity = 241/301 (80.07%), Postives = 265/301 (88.04%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 138.7 bits (348), Expect = 7.8e-33 Identity = 88/285 (30.88%), Postives = 144/285 (50.53%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 138.7 bits (348), Expect = 7.8e-33 Identity = 88/285 (30.88%), Postives = 144/285 (50.53%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 109.0 bits (271), Expect = 6.6e-24 Identity = 80/315 (25.40%), Postives = 149/315 (47.30%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. TAIR 10
Match: AT2G19220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 443 Blast hits to 267 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-14 Identity = 44/149 (29.53%), Postives = 77/149 (51.68%), Query Frame = 0
BLAST of CsaV3_5G004940 vs. TAIR 10
Match: AT3G11310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 2.4e-10 Identity = 36/127 (28.35%), Postives = 65/127 (51.18%), Query Frame = 0
HSP 2 Score: 43.5 bits (101), Expect = 3.4e-04 Identity = 18/51 (35.29%), Postives = 34/51 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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