CsaV3_5G003660 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G003660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ATP-dependent Clp protease proteolytic subunit
Location	chr5: 2356303 .. 2360341 (-)
RNA-Seq Expression	CsaV3_5G003660
Synteny	CsaV3_5G003660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGGGTTGAGCGTATTTCGTAGAAGCCCAAAAGGCCTAATTTAGAATTTGCTGACGTTATCTGATCCTTCGGCGCTGGCCGCTGTGTCATCTTCTCCAGAATTAGACCCAAAACGGGTCTAAGTTCTTTTGCATTGAGAGTTCTGTAATCGACTTGGAAATGGCAGTCACTTCTATTCCTTGTCTTCAACCTCAAATCAAAGTTTCTCAGCCTTCTCTCAGGTTTTCCTTCTCTTCCGATTATCAGTTTATCTTTATGCTACTCTCACCGCTTACCTGATTTCGTTTCGGGTTTCTGAATTTTGCTAGCGTTGCAACCAAGGTTTACACGGGATTAAAGCCTCAATCAGCTAGTGAGCTTCCATTCCCTTCCTTTTCTTGATGCTTGTTACTCATCTGTTTGACTGCTTGTTATTCACTTATGGTATCTGTTTGTTTGTTTTTTTCTTTCAAATTTTAAGGTCCATTCGGAGGAGCAAAACCTAATATTACTGCTGAATTCTATGGAAAAGTTCACAAAAGTTTGCAGACCAGGTAATTGTAGCTTTAGCTAAGCCTGCATCCTGTTTTGCATTTGGAACTAAATTCTGATGATATTAATCAATTAGAGTTCTTGGACCTTCATGACATTCTATGCTTATTCTTAAGTTCTCGTTCTTCCTAAAATATATTTATCTTGCTAAAATTTCTTCCTTTATTACTGCTAGCTCCTAGGTTGCTATATATAATGACTATTTATACATAATGTTTCATTTGTTTCCTTCATGAAATAGTATCGTTTTCCTGTTTGAAAAATCATGTGACATAAATGCTAGACTAAGGAGAGATTGACTTGAAATCTTTTCTTATAGTGGGTGGCGTGCAGAAAATACTATCGATTTTATTCCTGTTCTAACTGAATATGGGAATTGCACTACTTCTTTTGGATATCATTTCTTTCCCATCAGTTACTGAATCCGAGTGTTTGACGGACAGTGGATGTGTGCTGAAATTTATCATAACATGGTCATACCTTATGACCGAGGAGTTCCTCCTCGATCTGTCTTTTGGAGAGAAAGGCCAATTTCTCTGGCTTGCTTGAGTGTGTGCAGTTCTCTGGGTTTTATGGGGTGAATGTAACAGTAAGATGTTTAGGCGAATGGAAAGGGATCTTAGAGAGGTGTGGTCCCTTGATCATTATCATGTTTATCTTAGGACTTCGATTTCAATAATTTTATGTAATTATTTTATAGGTGTTACCTCGCATAGTTGGAGTCCCTTCTTGTAAAGGGAGTTTCCTCTTTTTGTCGACTTGATTTTTTGTATGCCTGTGTATTCTTTCATTTTTATTCTCAACGAAAGCTGTGATTTTCATACAATAGATACATACATATTATGCAACTATTTGTAAACATTTAGCCCTGATTGACATACCATTTAGTTTTTGTTTTTCAAATTTATGTTTGTTTTCTCAAATTCTCTTTACAATCATTTTCATCTTTCTTATGGAAACATTTGAATTCTTAGCCAAATTTCAAATAGACCAACAAGTTTTTGCAAACTACCTTTCTTTAATTTCTAAAAATTTAATTTTCTTCTTGAAATTTGACAAGAATTCAAATGTTTTTTTAAATAAATTTGAAAATCATACTCAAGGAACAATGGTCAAGCACAATATATGTGTGTGTATATATATATATTAAAAAAAGAATCATTATCAAACGGGGCCTGCTATTTCCTACATTTTCCATTCAAAATCTTTATTTCCTACATTTTGATTCTACTGATTGGTGCTTTCTGTGTCAATGACATCTGTAAGGACTACAAAGTTGAAGAGCAATTAAAAGAGGTGTTTCTGTTGCAACGTGCATTCATCTGGCAGTTAATGTGTTTCTTCTAATTCATTACTTTACATGCAGGACAAATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACTCCAAGGGTGCCTTACAAAACTCCTGGGGAGGGATTTTGGCAATGGGTTGATTTGTGGAATGCACTGGTAAGTGATAGATCTAGTTATGTAATTTTGGCTCTGACTAAGGCTGAGCAGAATTTCAGTTTGACATTATGAGACTCATCAGCCACGACACGAGTTTCCTACAATTAAGTTACCACAAAATTTACTATTAGCATCAGTGTATTTTTCACAGTAGAAAGATGCTGCTGTTGGTTTTATCATTTTGTTACATTATTGCCTTTATTTTCTTTCCTGTCCATTTATACCAAATTTAATTCTTTTGGCTAGAATCTCTGAATATAAAAACCAACTTTTTGGTAAATAAATATATAAAGTACCGAACTTTTATAACCTCACGATTTTTCTTGTGTTCAGTATCGAGAACGAGTTATCTTCATTGGGGATTACGTTGATGAAGAGTTTAGCAATCAAATTTTGGCAACAATGCTGTATCTTGACAGCGTTGAAGCTTCCAAGAAACTCTATATTTACATAAATGGCCCAGGTGGAGATGTGAGTTAAATATGTTTACAAATTTATATCTTTTATTTGGATCCGCTCCACCATATTTATCCTTTATATTTTCTGTTCTCTCAATTATATTCTAGTGGTTCATTTAGTATTATTAGTTTTCTGATGAAACCTTGCATCTCTGCAGCTAACTCCAACTTTGGCCCTCTACGATACAATGCAAAGTTTGAAGAGTCCTATAGCTACACATTGTATGGGTCAGGCCTATAATATGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGTATACAGATTCAATTATTGTTAAAGAAATGTTGGATTTTGTAGGGAGTTTTTCGATATATTAAACGTGAACACTATTTTTTCAATCAGTCACATCATTCATATTCATCAAAACATATCTTATGCAACTTCATAAGATAAATCTCAACCTCTTTATTTGCATTAAATAAAATTGGAAATGCTCATTCCTTTTGCCTAACTGTCTCCTTCCTTTTTATCTCTTTTAAATCTTACCACGCCTTTCCTTGTCCAGGGTAACCGCTCTGCTATGCCACTATCACGAATTGCTTTGCAATCCCCAGCCGGATCTGCTCGTGGCCGGGTATCATTAATTTGTTATATCACGTCACACACATTGATCATGTATTGCCTTGTTAAGTTCTAAACATTTTGTTCTGTTACATTTTTGTTTGAAAATCGTCTTGACAGGCTGATGATATTCAAAATGAAGCAAACCAGCTCTTAAAAATCAGGGATTATCTTTTTGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGGTCGGTTCCTCAGCACCATAGCATATAAATATATAATAATATCTTCATTCATGACAAAACCTACTCTTGATACTAGTGAGATAACCAACATGACTTTTTTGGTTTATTAATCTTGAGCTACTCTTGCTACTAGTGAGATAACCAACATGACTTTTTTGGTTTATTAGTCTTGAGCTTTTACGAACTTGCAACATAGCTCGCAAACACCAAATTTGAATTTTGAGTTGTGAATCTTACATTGTACTGATTTGAAAACGTTTTTGAAAAATACAACCTTAACTTAAAGACTTTTTATAAATGGATAAATGCAGATTCACAAGGACTTGAGTGGAACTAAGCGATTTAATGCGCAGCAAGCTCTTGAGTATGGACTTATTGACCGTATAGCTAGGCCAGCTCGCATTAAGGCTGATGCACCTCGCAAGGATGATGGAACAGGGCTTGGTTAGAGTTAAGTAAATCCTTCACATGTTTATTTTTAGGCTCACATGAAGCACACAACTAATTAATTATAATTTATTTATGAAAGTTCGTATCTAGTTTTGATCCATTATATTTAAATGGAAGATTTTTGGAAACATTATGTTTGTTAATTTTTTCTAACATGGTTCAATCGGTTAGGTCTATATCAGGTTGAATTTGGACATTTGTGGCAAGAAGCATACTATTTATATCTGTAAGCTAATAAATTCAGCCTAGACTTAACTACTAATTTTAACCCAAATTAAATTTTCTTAAAGATTAGAGATGATCTAAATATTTA

mRNA sequence

ATGGCAGTCACTTCTATTCCTTGTCTTCAACCTCAAATCAAAGTTTCTCAGCCTTCTCTCAGCGTTGCAACCAAGGTTTACACGGGATTAAAGCCTCAATCAGCTAGTCCATTCGGAGGAGCAAAACCTAATATTACTGCTGAATTCTATGGAAAAGTTCACAAAAGTTTGCAGACCAGGACAAATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACTCCAAGGGTGCCTTACAAAACTCCTGGGGAGGGATTTTGGCAATGGGTTGATTTGTGGAATGCACTGTATCGAGAACGAGTTATCTTCATTGGGGATTACGTTGATGAAGAGTTTAGCAATCAAATTTTGGCAACAATGCTGTATCTTGACAGCGTTGAAGCTTCCAAGAAACTCTATATTTACATAAATGGCCCAGGTGGAGATCTAACTCCAACTTTGGCCCTCTACGATACAATGCAAAGTTTGAAGAGTCCTATAGCTACACATTGTATGGGTCAGGCCTATAATATGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGGTAACCGCTCTGCTATGCCACTATCACGAATTGCTTTGCAATCCCCAGCCGGATCTGCTCGTGGCCGGGCTGATGATATTCAAAATGAAGCAAACCAGCTCTTAAAAATCAGGGATTATCTTTTTGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATTCACAAGGACTTGAGTGGAACTAAGCGATTTAATGCGCAGCAAGCTCTTGAGTATGGACTTATTGACCGTATAGCTAGGCCAGCTCGCATTAAGGCTGATGCACCTCGCAAGGATGATGGAACAGGGCTTGGTTAG

Coding sequence (CDS)

ATGGCAGTCACTTCTATTCCTTGTCTTCAACCTCAAATCAAAGTTTCTCAGCCTTCTCTCAGCGTTGCAACCAAGGTTTACACGGGATTAAAGCCTCAATCAGCTAGTCCATTCGGAGGAGCAAAACCTAATATTACTGCTGAATTCTATGGAAAAGTTCACAAAAGTTTGCAGACCAGGACAAATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACTCCAAGGGTGCCTTACAAAACTCCTGGGGAGGGATTTTGGCAATGGGTTGATTTGTGGAATGCACTGTATCGAGAACGAGTTATCTTCATTGGGGATTACGTTGATGAAGAGTTTAGCAATCAAATTTTGGCAACAATGCTGTATCTTGACAGCGTTGAAGCTTCCAAGAAACTCTATATTTACATAAATGGCCCAGGTGGAGATCTAACTCCAACTTTGGCCCTCTACGATACAATGCAAAGTTTGAAGAGTCCTATAGCTACACATTGTATGGGTCAGGCCTATAATATGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGGTAACCGCTCTGCTATGCCACTATCACGAATTGCTTTGCAATCCCCAGCCGGATCTGCTCGTGGCCGGGCTGATGATATTCAAAATGAAGCAAACCAGCTCTTAAAAATCAGGGATTATCTTTTTGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATTCACAAGGACTTGAGTGGAACTAAGCGATTTAATGCGCAGCAAGCTCTTGAGTATGGACTTATTGACCGTATAGCTAGGCCAGCTCGCATTAAGGCTGATGCACCTCGCAAGGATGATGGAACAGGGCTTGGTTAG

Protein sequence

MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTRTNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG*

Homology

[Close]

BLAST of CsaV3_5G003660 vs. NCBI nr
Match: XP_004147568.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis sativus] >KGN50188.1 hypothetical protein Csa_000125 [Cucumis sativus])

HSP 1 Score: 570.5 bits (1469), Expect = 8.3e-159
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR
Sbjct: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI
Sbjct: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL
Sbjct: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK
Sbjct: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG
Sbjct: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 285

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BLAST of CsaV3_5G003660 vs. NCBI nr
Match: XP_038906920.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 504.6 bits (1298), Expect = 5.6e-139
Identity = 245/285 (85.96%), Postives = 267/285 (93.68%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MAV+S PCLQPQIKVSQP LS  TKVY+GLKPQSASPFGGAKPN+TAEFYGKVHKSLQ R
Sbjct: 1   MAVSSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQAR 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
             NKKAARAQFQMMPIGTPRVPY+TPGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  AQNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDS+E SKKLY+YINGPGGDLTP++A+YDTMQSLKSP+ATHC+G AYN+AAFLL
Sbjct: 121 LATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKGNR AMPLSRIALQSPAG+ARG+ADDIQNEAN+LL+IRDYL+DELSKKTGQPVEK
Sbjct: 181 AAGEKGNRCAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEK 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           I++DLS  KRFNAQ+AL+YGLIDRI RP RIKADAPRKD GTGLG
Sbjct: 241 INEDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. NCBI nr
Match: XP_008437161.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 503.4 bits (1295), Expect = 1.3e-138
Identity = 247/285 (86.67%), Postives = 264/285 (92.63%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MAV+S PC QPQIKVSQPSLS  TKVY+GLKPQSASPFGG KPNITAEFYGKVHKSLQ R
Sbjct: 1   MAVSSTPCFQPQIKVSQPSLSFTTKVYSGLKPQSASPFGGVKPNITAEFYGKVHKSLQAR 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           T+NKKAARAQFQMMPIGTPRVPY+ PGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDS+E S+K Y+YINGPGGDLTPT+ALYDTMQSL SP+ATHC+G AYNMAAFLL
Sbjct: 121 LATMLYLDSIETSRKFYMYINGPGGDLTPTMALYDTMQSLNSPVATHCVGYAYNMAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKGNR AMPLSRIALQSPAGSARG+ADDIQNEAN+LL+IRDYLF+ELSKKTGQPVEK
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLFEELSKKTGQPVEK 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           I KDLS  K FNAQ+AL+YGLIDRIARP RIKADAPRKD GTGLG
Sbjct: 241 ISKDLSRLKPFNAQEALDYGLIDRIARPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. NCBI nr
Match: XP_022158384.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-137
Identity = 244/285 (85.61%), Postives = 267/285 (93.68%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MAV+S PCLQPQIKVSQP LS ATK+Y+GLK QSA PFGGAKPN+T EFYGKVHKSL +R
Sbjct: 1   MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSR 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           T+NKKAARAQFQMMPIGTPRVPY+TPGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDS+E SKKLY+YINGPGGDLTP++A+YDTMQSLKSP+ATHC+G AYN+AAFLL
Sbjct: 121 LATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKGNR AMPLSRIALQSPAG+ARG+ADDIQNEAN+LL+IRDYLFDELSKKTGQPVEK
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEK 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           I+KDLS  KRFNAQ+AL+YGLIDRI RP RIKADAPRKD GTGLG
Sbjct: 241 INKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. NCBI nr
Match: XP_022957748.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucurbita moschata] >KAG6606148.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036093.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 478.0 bits (1229), Expect = 5.6e-131
Identity = 233/285 (81.75%), Postives = 260/285 (91.23%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MA +S PC QPQI  SQ  LS ATKVY+GLK QSASPFGGAKPN+TAEFYGKVHKSLQ+ 
Sbjct: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           TNNKKA+R QFQMMPIGTPRVPY+ PGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDS+E+SK LY+YINGPGGDLTP+LA+YDTMQSLKS + THC+G AY++AAFLL
Sbjct: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKG+R+AMPLSRIALQSP G+ARG+ADD++NEAN+LL+IRDYLF+ELSKKTGQPVE+
Sbjct: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           I+KDLS  KRFNAQ ALEYGLIDRI RPARIKADAPRKDDG GLG
Sbjct: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy Swiss-Prot
Match: Q9XJ36 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.7e-106
Identity = 187/271 (69.00%), Postives = 230/271 (84.87%), Query Frame = 0


Query: 17  QPSL--SVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTRTNNKKAARAQFQMM 76
           QPSL  S + K+Y+GLKPQSAS       N+  EFYG+V+KSLQ+ T   KA+R++ +MM
Sbjct: 11  QPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTG--KASRSRVKMM 70

Query: 77  PIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEASK 136
           PIGTPRVPY+   EG WQWVD+WNALYRERVIFIG  +DEEFSNQILATMLYLD+++ S+
Sbjct: 71  PIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSR 130

Query: 137 KLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLS 196
           ++Y+Y+NGPGGDLTP+LA+YDTM+SLKSP+ THC+G AYN+A FLLAAGEKG+R AMPLS
Sbjct: 131 RIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLS 190

Query: 197 RIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNAQ 256
           RIALQSPAG+ARG+ADDIQNEA +L +IRDYLF+EL+K TGQP E++ KDLS  KRFNA+
Sbjct: 191 RIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAE 250

Query: 257 QALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           +A+EYGLID+I RP RIK DAPR+D+  GLG
Sbjct: 251 EAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy Swiss-Prot
Match: Q8DJZ9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.8e-54
Identity = 99/192 (51.56%), Postives = 139/192 (72.40%), Query Frame = 0


Query: 74  MPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEAS 133
           MPIG P+VPY+ PGE + QW+D++N LYRER+IF+G  VD+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPG 60

Query: 134 KKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPL 193
           K + +YIN PGG +T  +A+YDTMQ +KS + T C+G A +M +FLLAAG KG R A+P 
Sbjct: 61  KDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120

Query: 194 SRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNA 253
           SRI +  P+G  RG+A DI+ EA ++L++R  L +  +  TGQP+EKI +D+      +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSA 180

Query: 254 QQALEYGLIDRI 266
           ++A  YGLIDR+
Sbjct: 181 EEAKNYGLIDRV 192

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy Swiss-Prot
Match: Q8YP43 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.7e-53
Identity = 100/192 (52.08%), Postives = 136/192 (70.83%), Query Frame = 0


Query: 74  MPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEAS 133
           MPIG P+VPY+ PG  F  W+ +++ LYRER+IF+G  VD+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60

Query: 134 KKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPL 193
           K +Y+YIN PGG +T  LA+YDTMQ +KS + T C+G A +M +FLLAAG KG R A+P 
Sbjct: 61  KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120

Query: 194 SRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNA 253
           SRI +  P+G  RG+A DI+ EA ++L+IR  L    +  T QP+ KI KD+      +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSA 180

Query: 254 QQALEYGLIDRI 266
           Q+A+EYGLIDR+
Sbjct: 181 QEAMEYGLIDRV 192

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy Swiss-Prot
Match: Q3MDK7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-52
Identity = 100/192 (52.08%), Postives = 135/192 (70.31%), Query Frame = 0


Query: 74  MPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEAS 133
           MPIG P+VPY+ PG  F  W+ +++ LYRER+IF+G  VD+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60

Query: 134 KKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPL 193
           K +Y+YIN PGG +T  LA+YDTMQ +KS + T C+G A +M +FLLAAG KG R A+P 
Sbjct: 61  KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120

Query: 194 SRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNA 253
           SRI +  P+G  RG+A DI+ EA ++L+IR  L    +  T QP+ KI KD+      +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEKDMDRDFFMSA 180

Query: 254 QQALEYGLIDRI 266
           Q+A EYGLIDR+
Sbjct: 181 QEAKEYGLIDRV 192

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy Swiss-Prot
Match: Q5N1Q7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-49
Identity = 95/193 (49.22%), Postives = 135/193 (69.95%), Query Frame = 0


Query: 74  MPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEAS 133
           MPIG P VPY+ PG  F +W+D++N L  ER+IF+G  V +  +N I+A +LYLDS ++S
Sbjct: 1   MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSS 60

Query: 134 KKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPL 193
           K +Y+YIN PGG +T  +A+YDTMQ +KSP+ T C+G A +M AFLL AG KG R A+P 
Sbjct: 61  KPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPH 120

Query: 194 SRIALQSP-AGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFN 253
           SRI +  P  G+ R +A DI+ EA ++L+I+  L   ++ +TGQP+EKI KD       +
Sbjct: 121 SRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMS 180

Query: 254 AQQALEYGLIDRI 266
           A++A EYGLID++
Sbjct: 181 AEEAREYGLIDQV 193

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy TrEMBL
Match: A0A0A0KKQ7 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_5G157950 PE=3 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.0e-159
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR
Sbjct: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI
Sbjct: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL
Sbjct: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK
Sbjct: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG
Sbjct: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy TrEMBL
Match: A0A1S3ATH1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103482668 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 6.1e-139
Identity = 247/285 (86.67%), Postives = 264/285 (92.63%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MAV+S PC QPQIKVSQPSLS  TKVY+GLKPQSASPFGG KPNITAEFYGKVHKSLQ R
Sbjct: 1   MAVSSTPCFQPQIKVSQPSLSFTTKVYSGLKPQSASPFGGVKPNITAEFYGKVHKSLQAR 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           T+NKKAARAQFQMMPIGTPRVPY+ PGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDS+E S+K Y+YINGPGGDLTPT+ALYDTMQSL SP+ATHC+G AYNMAAFLL
Sbjct: 121 LATMLYLDSIETSRKFYMYINGPGGDLTPTMALYDTMQSLNSPVATHCVGYAYNMAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKGNR AMPLSRIALQSPAGSARG+ADDIQNEAN+LL+IRDYLF+ELSKKTGQPVEK
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLFEELSKKTGQPVEK 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           I KDLS  K FNAQ+AL+YGLIDRIARP RIKADAPRKD GTGLG
Sbjct: 241 ISKDLSRLKPFNAQEALDYGLIDRIARPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy TrEMBL
Match: A0A6J1DZ88 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111024880 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.1e-138
Identity = 244/285 (85.61%), Postives = 267/285 (93.68%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MAV+S PCLQPQIKVSQP LS ATK+Y+GLK QSA PFGGAKPN+T EFYGKVHKSL +R
Sbjct: 1   MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSR 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           T+NKKAARAQFQMMPIGTPRVPY+TPGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDS+E SKKLY+YINGPGGDLTP++A+YDTMQSLKSP+ATHC+G AYN+AAFLL
Sbjct: 121 LATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKGNR AMPLSRIALQSPAG+ARG+ADDIQNEAN+LL+IRDYLFDELSKKTGQPVEK
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEK 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           I+KDLS  KRFNAQ+AL+YGLIDRI RP RIKADAPRKD GTGLG
Sbjct: 241 INKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy TrEMBL
Match: A0A6J1H153 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111459199 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.7e-131
Identity = 233/285 (81.75%), Postives = 260/285 (91.23%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MA +S PC QPQI  SQ  LS ATKVY+GLK QSASPFGGAKPN+TAEFYGKVHKSLQ+ 
Sbjct: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           TNNKKA+R QFQMMPIGTPRVPY+ PGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDS+E+SK LY+YINGPGGDLTP+LA+YDTMQSLKS + THC+G AY++AAFLL
Sbjct: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKG+R+AMPLSRIALQSP G+ARG+ADD++NEAN+LL+IRDYLF+ELSKKTGQPVE+
Sbjct: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           I+KDLS  KRFNAQ ALEYGLIDRI RPARIKADAPRKDDG GLG
Sbjct: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. ExPASy TrEMBL
Match: A0A6J1JZK9 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111491133 PE=3 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.3e-130
Identity = 230/285 (80.70%), Postives = 259/285 (90.88%), Query Frame = 0


Query: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60
           MA +S PC QPQI  SQ  +S ATKVY+GLK QSASPFGGAKPN+T EFYGKVHKSLQ+ 
Sbjct: 1   MAASSTPCFQPQIITSQSPISPATKVYSGLKLQSASPFGGAKPNLTVEFYGKVHKSLQSS 60

Query: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120
           TNNKKA+R QFQMMPIGTPRVPY+ PGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180
           LATMLYLDS+E+SK LY+Y+NGPGGDLTP+LA+YDTMQSLKS + THC+G AY++AAFLL
Sbjct: 121 LATMLYLDSIESSKALYMYLNGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180

Query: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240
           AAGEKG+R+AMPLSRIALQSP G+ARG+ADD++NEAN+LL+IRDYLF+ELSKKTGQPVE+
Sbjct: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240

Query: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           I+KDLS  KRFNAQ ALEYGLIDRI RPARIKADAPRKDDG GLG
Sbjct: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 285

[Close]

BLAST of CsaV3_5G003660 vs. TAIR 10
Match: AT1G12410.1 (CLP protease proteolytic subunit 2 )

HSP 1 Score: 387.1 bits (993), Expect = 1.2e-107
Identity = 187/271 (69.00%), Postives = 230/271 (84.87%), Query Frame = 0


Query: 17  QPSL--SVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTRTNNKKAARAQFQMM 76
           QPSL  S + K+Y+GLKPQSAS       N+  EFYG+V+KSLQ+ T   KA+R++ +MM
Sbjct: 11  QPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTG--KASRSRVKMM 70

Query: 77  PIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEASK 136
           PIGTPRVPY+   EG WQWVD+WNALYRERVIFIG  +DEEFSNQILATMLYLD+++ S+
Sbjct: 71  PIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSR 130

Query: 137 KLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLS 196
           ++Y+Y+NGPGGDLTP+LA+YDTM+SLKSP+ THC+G AYN+A FLLAAGEKG+R AMPLS
Sbjct: 131 RIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLS 190

Query: 197 RIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNAQ 256
           RIALQSPAG+ARG+ADDIQNEA +L +IRDYLF+EL+K TGQP E++ KDLS  KRFNA+
Sbjct: 191 RIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAE 250

Query: 257 QALEYGLIDRIARPARIKADAPRKDDGTGLG 286
           +A+EYGLID+I RP RIK DAPR+D+  GLG
Sbjct: 251 EAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279

[Close]

BLAST of CsaV3_5G003660 vs. TAIR 10
Match: ATCG00670.1 (plastid-encoded CLP P )

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-39
Identity = 77/194 (39.69%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 74  MPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEAS 133
           MPIG P+VP+++PGEG   WVD++N LYRER+ F+G  VD E SNQ+++ M+YL   + +
Sbjct: 1   MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60

Query: 134 KKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPL 193
           K LY++IN PGG +   +A+YDTMQ ++  + T CMG A ++A+F+L  G    R A P 
Sbjct: 61  KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120

Query: 194 SRIALQSPAGS-ARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFN 253
           +R+ +  PA S    +  +   EA +LLK+R+ +     ++TG+P+  I +D+      +
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180

Query: 254 AQQALEYGLIDRIA 267
           A +A  +G++D +A
Sbjct: 181 ATEAQAHGIVDLVA 194

[Close]

BLAST of CsaV3_5G003660 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-33
Identity = 68/183 (37.16%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 95  DLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEASKKLYIYINGPGGDLTPTLALY 154
           D+++ L +ER+I I   ++++ S+ ++A +LYL+S   SK +++Y+N PGG +T  LA+Y
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107

Query: 155 DTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLSRIALQSPAGSARGRADDIQN 214
           DTMQ ++SPI+T C+GQA +MA+ LLAAG KG R ++P + + +  P+G   G+A DI  
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167

Query: 215 EANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNAQQALEYGLIDRI--ARPARIK 274
              Q++++ D L +   K TGQP++ +  ++        ++A  +G+ID +   RP  + 
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELV 227

Query: 275 ADA 276
            DA
Sbjct: 228 KDA 230

[Close]

BLAST of CsaV3_5G003660 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 138.3 bits (347), Expect = 9.8e-33
Identity = 69/166 (41.57%), Postives = 111/166 (66.87%), Query Frame = 0


Query: 100 LYRERVIFIGDYVDEEFSNQILATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQS 159
           L++ R+I  G  VD++ +N I+A +LYLD+V+ +K + +Y+N PGG +T  +A++DTM+ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 160 LKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQL 219
           ++  ++T C+G A +M AFLL+AG KG R ++P SRI +  P G A+G   DI  +AN++
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 220 LKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNAQQALEYGLIDRI 266
           L  +  L   L+  TGQ +EKI++D       +A++A EYGLID +
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGV 284

[Close]

BLAST of CsaV3_5G003660 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-29
Identity = 62/186 (33.33%), Postives = 108/186 (58.06%), Query Frame = 0


Query: 94  VDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEASKKLYIYINGPGGDLTPTLAL 153
           +D  N L R+R++F+G  VD+  ++ +++ +L LD+ ++ + + ++IN PGG +T  + +
Sbjct: 84  LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGI 143

Query: 154 YDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLSRIALQSPAGSARGRADDIQ 213
           YD M+  K+ ++T C+G A +M AFLLA+G KG R  MP S++ +  P G+A G+A ++ 
Sbjct: 144 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMS 203

Query: 214 NEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNAQQALEYGLIDRIARPARIKA 273
               +++  +  L    S+ TG+P  +I  D       N  +A EYGLID +    +   
Sbjct: 204 IRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGL 263

Query: 274 DAPRKD 280
            AP  D
Sbjct: 264 IAPIGD 269

The following BLAST results are available for this feature:

BLAST of CsaV3_5G003660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147568.1	8.3e-159	100.00	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
XP_038906920.1	5.6e-139	85.96	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
XP_008437161.1	1.3e-138	86.67	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chl...	[more]
XP_022158384.1	1.1e-137	85.61	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
XP_022957748.1	5.6e-131	81.75	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]

BLAST of CsaV3_5G003660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ36	1.7e-106	69.00	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
Q8DJZ9	5.8e-54	51.56	ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatu...	[more]
Q8YP43	3.7e-53	52.08	Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain ...	[more]
Q3MDK7	1.4e-52	52.08	ATP-dependent Clp protease proteolytic subunit 2 OS=Trichormus variabilis (strai...	[more]
Q5N1Q7	1.1e-49	49.22	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain AT...	[more]

BLAST of CsaV3_5G003660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKQ7	4.0e-159	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A1S3ATH1	6.1e-139	86.67	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1DZ88	5.1e-138	85.61	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1H153	2.7e-131	81.75	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JZK9	2.3e-130	80.70	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CsaV3_5G003660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12410.1	1.2e-107	69.00	CLP protease proteolytic subunit 2	[more]
ATCG00670.1	7.0e-39	39.69	plastid-encoded CLP P	[more]
AT5G23140.1	3.4e-33	37.16	nuclear-encoded CLP protease P7	[more]
AT1G02560.1	9.8e-33	41.57	nuclear encoded CLP protease 5	[more]
AT1G66670.1	3.9e-29	33.33	CLP protease proteolytic subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 95..110 score: 41.72 coord: 187..206 score: 34.75 coord: 135..155 score: 44.64 coord: 166..183 score: 55.69 coord: 244..263 score: 37.12
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 77..269 score: 31.745827
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 95..265 e-value: 5.66327E-84 score: 247.74
None	No IPR available	GENE3D	3.90.226.10		coord: 65..274 e-value: 9.2E-58 score: 197.2
None	No IPR available	PANTHER	PTHR10381:SF46	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC	coord: 9..279
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 92..267 e-value: 1.1E-59 score: 201.4
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 9..279
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 91..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G003660.1	CsaV3_5G003660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity