
CsaV3_5G003280 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGGGAAGTTGAAAAGTGTAGGGGAGTATATTTGTCATTTGAAGTAAAATTATTAGTATAATGAGAAAAGGCCGTGGGCTTCTAAGGCCGAGTTGGTGGGCCAGATAAGGAAATGGGCTCCACATGGGAAAAAAGACAAACAGCTAAGCAAAGCGGAAGGCGAAGACCACGTGGTGTTTCTCTTCGCGGCGAACAGATCCAACGGCTCCAATTGAAAATATGGTTGGACGATGATCCAAGGGGCGAAATGAATTGCATTTAATTAATTAGCATAAATCTCAGTTCCCCACTTCCAAAAATGTTCCTTTTCTCCTCTTTTGAGCAAGCTACTCTGAAGCAATAAAAGTTGTAAAATTTTGGAAAACCCTAAATCATAATCTTTCACTGTTCTTCGCTTTTTTCACAGGATTTCTTCAAAAATCATGGGAGGAACTAAGCGCTCTGCCTTATCAGACTCGATTCCCGACACTTACGATTCTGTGGTATTTTCCTTTTTCTTCTTCAAACCTGATTCGTTCTTCCTCATATCCTACTTTTGATTTTTCTATATATATATATATATATTTTACAGCTTCAATGATGATTATTAATTTTTTTTTTTTTATTTGTGTGTGTGTGTGTACATGAATTGGTATAGACTCTGCTTTGCTTCATTGATTTTTTTTTTTTTTACTTCCTCTGTTTAGTTAGGATTGAGCATTTCCCCAATATTTAGAATCTAACTAGCAGAATAGTTCCGTCTAGTTGAACTCCGTTGGGTTAATTAGTTTCATTTAGTCGGTGCTTTTTGTCTGCTTATAGTAATCTTAGCTTTCTTTGAGTGTTTGGAAATCTTCCTTTAAGTCATAAGGTTGGCGCGTTTTTACTTTATTGAATTATTCATTCAGTTCTATTTGGGGTTATTTTTTATCGAATTTTCTACAAAATAACTGGAAGTCAATTAATTACGGGTTTGTTGCTAATTGATAAAGCACTCCCTGATTGAAGAATGAATCACATGATGTCTGGAAGGCTTTACTATTGTAATTTTCTCTCTCTCTCTTATTCGCAAATTTAATGCAGTTTGGTAACAAAAGAATATTGGCGGGATCCTCATTTGATATTCAGAGGGCAGAACCATCTCAACGACAGAAGACAAAAACACCTACGCTTGATGTGCGCCGGGCGGAGTCATCTCAGCAGCATGTGAGAGCACTTAACACTCAATTCGCAAGGTCTAACTGTGATTACCATATTTCAAAAGTGTTTCTTTTGTTTTATTATTTTCTACTACACGTTCTTGACACCATATATTAATAAATTCAAATGAACCTCTTGATCATTTGTTATCTTGCATTGTCGTTTCTTATACTTACTGATTTTATTGTTTTTCTTTTTTAAAGTAGCTAGTTGTACTTGCAACTGTTTATGATTTTAGAATGTTGGAAGTGTTAATATTGGGATTTCATACCCATATGGTATTAATTGTTTACAATATTTTTTGTTTATACAGTTGGGTGCAGTCACAATTAGCCAATCATCCAGATGAACTTTGGGAAGATGGTATCCGCGATTACTTGACTCATGCCTCAAGTATTATGGTAAGTGCTCATCATGTTTTGTTCTGCTTTTATCTGAACTCCAGCTTGGTGTTCTATAATCCTGCTTTATGACTTCATCAAGCCCTTGCAGATGTGCAACATCTTTAACACAATAAGAAATCAATTTGACTTGTTTAAGAATTTCTAACTACTATCAAACATTCATCTTTCTTTTGGTAAGGCAAAATTAATGTTCCCTGCTTTATATGCCATTAATTTATCATATCATAAGTTTGTTTGTTTAAAGTATTAAGTTCTACACCAAGTGACAGACTTGCATATCCAAATTATTTGTCAAATCAGTATCCATGACTTAATTTTTTTGTATTCAAAGGAAAAATTTAGTGATATTGTTGAGTGGCTCAAAGCAAACGCTGTTAAAGGAGAAAGTTCACCTTCTACCGGATCTCCCACAGCTGAAAAGAAGACAGAAATTGAACACAAGAATACTGATGTAAAACTATTTCAAGGACAAACTAATTTTGCACCTATCAGTGCAACTACTAGCAGTGCAACTTCATGGACCTCTGGGGCATTCTTCAACCATCAAACTCCTAGCATATTTGGTAACTACTTTTCTAGCATTGCAACTTCATGGACCTCTTATGTTATGATGTGATCTCAATGAATAAATAAAGATTGACATTTTGTTGAAGTTCCACTTATTCCAGATGTTTATATTTGATTAGGCTCGGACTAATTCTTTTATATATATATATATATATATATATATATATATATGAATTGTTTGTAGGAACAAGAACTACCATAACAACCCTGTTTTTGGACTCAAGTTTTTGCATTTGATACATGAACTTTTAACATTTACTAGCAACTTATTACCTTCATCTGTTCCTTTGTTCCTATGATTAAGTTCTTAGAGACCTAAAAGTAGTATATTTCGTTATGCAACTAGTATTGAACTATCCCATAATTCCTTAGCTGGTTCTAAATGGACTCCTTTTCTTCTCTTCCTTTGGCTAGGATTACAAAGTTCAGTTCCTGCCAATGGTGTTTCTGTTGGCCAGACTGCAGTTCCAACTTCAGAGAGTGTGGATGACGGTGAGATTCTTGAGTTTTTGCACTTTTCAGTTACAATGTTGCACCAAAGATGACCTGAGACTAACAAATTATAAATAAGTTTGAGTCGTCGTGTTGATGGAATCTGTTATTGACCGTTCTCAATGCTTGAATTTTGAGCTCAAAAGGGTTAGATTAAATGTATTATAGATTATCTACTGTCATTACTTTCCAAATTTGTTGATTTATCTTCTACAGAAACTTGTACTCAAATTTTATAGAATGGCACATCTTATGACTCATAATTTTCAAGAATCACTATATGTGGGGAGGGAAGGAGTGGGGGAATTCGGTCAGGATTGGTTTTTTGAGTTGATGCAAATGCCTTACAGCATGTAAATTAGGGGAGGGAGAGAGGGCTGTTTTAAATTGAAAGATGGCGTTGAGGGGAGCAAGGATCTTAATTGTGAGTTCAGAATCTTCCTTGGTCTGGGGCATATTTGATTGTTATTTTTAATTATATAGTGCCACGTTCTTAGTTTGAAGCCTTGTTTTGGTTGTAGAAAATGACTTGGAGCAGCCAAGCAGCCCATCTGTAAAGAAGTCTGAAGAGAAAGGGGTGGTTGTAGTGCACGAAGTTAAGTGCAAGCTTTATGTGAAGGTATTTGCTTCTGAAAAGTGGAATTTAAATGGTTCTATTTTCAGCATAAAGTTAATTAACAGCTCAGAAAGTCATTCTGTTTTTCGATGAGCACTTTTCAACATTTGCATTGTGAGATTTGTTCTAAAATATATATACACACATACATACATACATACATACATAAATAGATATATATTTGGGTAGATGCATGTTGACTTTATTTTATGACCTCTTTCTGGGAGGGGGAACCATTTTGTTTGAATATTTCCTTCTGGTATTCCATTGCTCTCAAAGGAAGAACAGAGGTAGATGTGAACCAGCACTTGAAATGCATTGTTATGACTGCTGTGAGAGTTGGGACCAGATAGCTTGATTGAGCTACTTGTTTTCAAACAGAGATAGTAGTCTGTTCTTTCTGTTGCAGTAGTTTTCCCTTGCAACTTTTATGTACGAGACAGCATAATTTGAGTATGGATATTATTTTATGGTTTCTGCTGAAGGATGAATGCAAAATGTTGCAAGTGATTTTAGAATATATGGAAAAATTTGGTGATGATAATAGTGCACGAGTAGTTTTCTGGAGGTATCCTTGGCATTCCAATTATTTTGTTGTTGACTCGTATCAATTGGAGCATTATTTTTGGAAATTGAGGAGGGAAAATTGGATGATCAAATGGATACAATGGAAGCACAAGCACCTTTTGGAGGAGTATGCAAGGCGTAGCGAAATCAATTGATGGCAAATAAGAATATTGCAACATCCTTGAAGGGATAAGGGTAGGTTGCTGGGCTTCTGCATGTTGTATCGCTGTGGTAGCCTCTGTGTAAAGATTGTGGTAGGATGTACAACCAACGACAAAATTTTCTTGGAGGAGCAGCTGACGAAGGCAGTGAATTAACTAGTGACTAAGAGATGTCTTGGGCTGTGGAGTCTAGAAAACCTCTTTAAATTGTTAAAGATTTGTATCTGTTGGTGTTTTTGATTGCCTAATTGTCTGAATATAATCAGTTTATCATGATCCATTAGATGAACTGTCTTGCAACGTGAGTGCAAATGAAGTTGTAAAGTAGTAAAAATGGAAAAAAAGTTATATTAGTTGCTTCATGATATATCCATATAGAAAATTTACTGTTGATGGATATATTGCTTCTGTCTTCCGTTATTTTTATTTGCCTTGTGTTTAATCTGACTTAAGATTTCATTTTTTTAGTACTCTTAGGATCTATAGATTAGCTACTGTATCCTTGACACACTACGTATGTGTGTTGTGTACATGCAGTCCACCGATCCAGCAGATAAAGATGCATGGAAAGACAAAGGCACAGGGCAGCTTTCCATAAAATGCAAGGAGGGTATCAGCAAGGGTACAAAGGAATCCAAACCAACGATTTTAATTCGAAATGATGTACGATTTATCATGCTTAATCTTTACTCTTTGATAATACTTCTTGTTTATCCCAGCTCTCTCTTCCCTAAGTCTTTCTTAACAACTGTGGTTGTTGGTTTATTCTTTTATTTCTCTCTCTATATATCTTACAATGTGTTGTATATTCTACTTATAGGTGGGGAGACTGCTTCTGAATGCTTTAATCTATCCAGGGATCAAAACAAATATTCAAAAGAATTCCATTGTTGCAATATTCCATACTTCGGTAATGTTTATCTTCATACCAATTATCAACATATTTGTATAACTTGGTCAGAAATAACGTGTGCTAGGAAATTCCCAAAGACATCCGTAGCTAATATTCTATTTTGTTTCTTGTAGAGTGAAGGCAATACTAACGATAATAGCGATAAAGATAAAGTTGTGGCACGAACATACTTGATTCGATTAAAAACAGAGGACGATCGGAATAAGCTGGCAACAGCAATTCAAGAATGCACTCCGGCACCTTGAGAGAGAGAGAGAGAGAGATTAAAGATGGTGTCTTTTAGAGGGGAAACCCTTTTATATGAGAAGAGAATTTTGTCAGTCTTATTTTCTTTGCCCCCATTTGTGAAGGGGGGTTTCTTCGGAAGACAAGATCAGTTTAAAATTCTAAATTGATCTCTCTACCAAATGAATCTACTTCTTTTAAAGAGAGGCTGAGGCAGTTGTACTATAAACAAGAGAATGAATGCTCTGTTTTATTTAGTGTAGCAATACAATAATGCAAAATTTCTTGGTTTCTC ATGTGCGCCGGGCGGAGTCATCTCAGCAGCATTTGGGTGCAGTCACAATTAGCCAATCATCCAGATGAACTTTGGGAAGATGGTATCCGCGATTACTTGACTCATGCCTCAAGTATTATGGAAAAATTTAGTGATATTGTTGAGTGGCTCAAAGCAAACGCTGTTAAAGGAGAAAGTTCACCTTCTACCGGATCTCCCACAGCTGAAAAGAAGACAGAAATTGAACACAAGAATACTGATGTAAAACTATTTCAAGGACAAACTAATTTTGCACCTATCAGTGCAACTACTAGCAGTGCAACTTCATGGACCTCTGGGGCATTCTTCAACCATCAAACTCCTAGCATATTTGGATTACAAAGTTCAGTTCCTGCCAATGGTGTTTCTGTTGGCCAGACTGCAGTTCCAACTTCAGAGAGTGTGGATGACGAAAATGACTTGGAGCAGCCAAGCAGCCCATCTGTAAAGAAGTCTGAAGAGAAAGGGGTGGTTGTAGTGCACGAAGTTAAGTGCAAGCTTTATGTGAAGTCCACCGATCCAGCAGATAAAGATGCATGGAAAGACAAAGGCACAGGGCAGCTTTCCATAAAATGCAAGGAGGGTATCAGCAAGGGTACAAAGGAATCCAAACCAACGATTTTAATTCGAAATGATGTGGGGAGACTGCTTCTGAATGCTTTAATCTATCCAGGGATCAAAACAAATATTCAAAAGAATTCCATTGTTGCAATATTCCATACTTCGAGTGAAGGCAATACTAACGATAATAGCGATAAAGATAAAGTTGTGGCACGAACATACTTGATTCGATTAAAAACAGAGGACGATCGGAATAAGCTGGCAACAGCAATTCAAGAATGCACTCCGGCACCTTGA ATGTGCGCCGGGCGGAGTCATCTCAGCAGCATTTGGGTGCAGTCACAATTAGCCAATCATCCAGATGAACTTTGGGAAGATGGTATCCGCGATTACTTGACTCATGCCTCAAGTATTATGGAAAAATTTAGTGATATTGTTGAGTGGCTCAAAGCAAACGCTGTTAAAGGAGAAAGTTCACCTTCTACCGGATCTCCCACAGCTGAAAAGAAGACAGAAATTGAACACAAGAATACTGATGTAAAACTATTTCAAGGACAAACTAATTTTGCACCTATCAGTGCAACTACTAGCAGTGCAACTTCATGGACCTCTGGGGCATTCTTCAACCATCAAACTCCTAGCATATTTGGATTACAAAGTTCAGTTCCTGCCAATGGTGTTTCTGTTGGCCAGACTGCAGTTCCAACTTCAGAGAGTGTGGATGACGAAAATGACTTGGAGCAGCCAAGCAGCCCATCTGTAAAGAAGTCTGAAGAGAAAGGGGTGGTTGTAGTGCACGAAGTTAAGTGCAAGCTTTATGTGAAGTCCACCGATCCAGCAGATAAAGATGCATGGAAAGACAAAGGCACAGGGCAGCTTTCCATAAAATGCAAGGAGGGTATCAGCAAGGGTACAAAGGAATCCAAACCAACGATTTTAATTCGAAATGATGTGGGGAGACTGCTTCTGAATGCTTTAATCTATCCAGGGATCAAAACAAATATTCAAAAGAATTCCATTGTTGCAATATTCCATACTTCGAGTGAAGGCAATACTAACGATAATAGCGATAAAGATAAAGTTGTGGCACGAACATACTTGATTCGATTAAAAACAGAGGACGATCGGAATAAGCTGGCAACAGCAATTCAAGAATGCACTCCGGCACCTTGA MCAGRSHLSSIWVQSQLANHPDELWEDGIRDYLTHASSIMEKFSDIVEWLKANAVKGESSPSTGSPTAEKKTEIEHKNTDVKLFQGQTNFAPISATTSSATSWTSGAFFNHQTPSIFGLQSSVPANGVSVGQTAVPTSESVDDENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGTKESKPTILIRNDVGRLLLNALIYPGIKTNIQKNSIVAIFHTSSEGNTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECTPAP* Homology
BLAST of CsaV3_5G003280 vs. NCBI nr
Match: KAE8647872.1 (hypothetical protein Csa_000090 [Cucumis sativus]) HSP 1 Score: 574.3 bits (1479), Expect = 5.9e-160 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. NCBI nr
Match: XP_004143935.1 (uncharacterized protein LOC101205107 [Cucumis sativus]) HSP 1 Score: 551.6 bits (1420), Expect = 4.1e-153 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. NCBI nr
Match: XP_008437206.1 (PREDICTED: uncharacterized protein LOC103482703 isoform X2 [Cucumis melo]) HSP 1 Score: 539.3 bits (1388), Expect = 2.1e-149 Identity = 271/291 (93.13%), Postives = 279/291 (95.88%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. NCBI nr
Match: XP_038875849.1 (uncharacterized protein LOC120068214 isoform X2 [Benincasa hispida]) HSP 1 Score: 529.3 bits (1362), Expect = 2.2e-146 Identity = 267/291 (91.75%), Postives = 275/291 (94.50%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. NCBI nr
Match: XP_008437205.1 (PREDICTED: uncharacterized protein LOC103482703 isoform X1 [Cucumis melo] >KAA0042801.1 uncharacterized protein E6C27_scaffold44G003040 [Cucumis melo var. makuwa]) HSP 1 Score: 521.2 bits (1341), Expect = 5.9e-144 Identity = 262/280 (93.57%), Postives = 270/280 (96.43%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. ExPASy TrEMBL
Match: A0A0A0KMP1 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G155600 PE=4 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 2.0e-153 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. ExPASy TrEMBL
Match: A0A1S3AU01 (uncharacterized protein LOC103482703 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482703 PE=4 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 1.0e-149 Identity = 271/291 (93.13%), Postives = 279/291 (95.88%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. ExPASy TrEMBL
Match: A0A5A7TMK5 (RanBD1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003040 PE=4 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 2.9e-144 Identity = 262/280 (93.57%), Postives = 270/280 (96.43%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. ExPASy TrEMBL
Match: A0A1S3AU17 (uncharacterized protein LOC103482703 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482703 PE=4 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 2.9e-144 Identity = 262/280 (93.57%), Postives = 270/280 (96.43%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. ExPASy TrEMBL
Match: A0A6J1E2W9 (uncharacterized protein LOC111430301 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430301 PE=4 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 4.3e-140 Identity = 256/291 (87.97%), Postives = 268/291 (92.10%), Query Frame = 0
BLAST of CsaV3_5G003280 vs. TAIR 10
Match: AT4G11790.1 (Pleckstrin homology (PH) domain superfamily protein ) HSP 1 Score: 250.8 bits (639), Expect = 1.4e-66 Identity = 166/383 (43.34%), Postives = 201/383 (52.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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