CsaV3_5G002950 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G002950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RNA-binding protein NOB1
Location	chr5: 1856096 .. 1859659 (+)
RNA-Seq Expression	CsaV3_5G002950
Synteny	CsaV3_5G002950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCCTATTTCAATAGTGAGTTAAAGACGACGACGTTTAAGCTTTGGTTTCCTAATTGTGAACTTGCTCCAAATTTTTGTAGGGTTTTAGGGTTTCAATCAGTATCACTTTGCTTCATCAACCTCTCAATTCTGTTCTTCCTCTTCTTCTTACGGCCATGGAGACCCCTTCTCCGGCTTCATGCTGGAGCAATGTTGTGAAAACTCAACCAGCACCGAAGCCTCAGCATCAGACTCCGTCCTCCTCCGTTCAAGTGTTCGCCGATAGCTGTAAGTCCAGTAAAGGCGTTGCTGTTGCCGTTGTTGATGCCAACGCCATTATCCAAGGAGGAGACAAGCTTTCCTCCTCTGCCGATAAGTTTGTTTCAGTTCCTGAGGTTTTGGATGAGATTCGTGATCCCGTGTCTCGCCATAGGCTCGCCTTTGTTCCCTTCACTCTTGAATCCATGGATCCCTCTCCTGACGCTCTTAATAAAGGTAGAATTCTGAATTATAGTCTCTCTATGTTGTTACAGACTCATCGTGTTGTTACTTCAAAGTTGAACTGATTGTTGTTTATAAGGAATGCTAGGATTTAAGGTTTAAGGTTTATTGCTGTTAGACTGTGTTTTAGGTGACTTTGAGAGGCAGGATTTTATGTTATTGAAGAGATTACTTTTTAAACGGTTTCTAAAATTTTCAGCCTGGCTAAATACCACATTTTTTTAGAATTGATTTCAGTTGGTTAAACCGTCCTTTGCCCGTTCACCAAAAAGTCATTACTCGTGGATTCCAGTGATTGGAAGCTGGTCAAGATCCTCCATTGATTAACTAGTTTAGCTATATAGCCTTAGCCCACTCCAAGGCGTTGGGGGATGATGACAAGAGTTATACGTAATTAAGTTTTCAACTTGGGGGTTACCCAGTGCATGGGAGAGTATCTCCAATTATGTTGAACTTTTACCACCAGGCACCCCTTGATTGAGAAAGCTAATGATTAAGTAGTACTAACTCTGGCCTCTTACTGCAAAGAAAATGTGAAGCATGCAAAATAAGTCTAACTTGGTGGTAGCCTTCTGAAATCGGTCTTTCCTAGTTGAATACTCTGAGAACCTATTACTGTTGATATCATAGTTGTTTCTGCCGTCTTAAAGTATTTTCTGTTGAATCTTACAGTAATCAAGTTTGCAAGGGCTACTGGTGACTTACAGACGCTTTCAGATGTTGATATTAAACTTATTGCTCTCACTTACACATTGGAGACTCAGATTCATGGGACTAAACATCTTCGTGAGTGTCCTCCCCCTGTTCACATGGTTAATACAAAGAGGTTACCTGAGAAAGACATGCCTGGTTGGGGATCCAACGTTCCTAATCTGGAAGAATGGGAAGCGTTAGAGCAAGATGCTGATGATCCGTCCCGTTTGACATCAAAGATTCTGCCTCTGCAGGATTTAAACCTGAACATCATCCCTTCAGATGGCCAATCTGAAGATCTTTCACTAGAGCACAAGGATGATGATAACTTGGAGCATCTAGATGAAACTGAGAGTGATTCAAGAAGATCAAGGAGATATCCTCCGAAGAAGAAGGAAATTAATATTGAAGGGAAGAAGATGGTGGCCGATGGAATTGATGCATCTCAGGGACAATATGATGATAATGAGGGCGACTGGACACCTGCTGTCAGTCGAAGCACTCAGAGAAGGTATCATAGGAGGAAAGCTAGACGTGAATATTATGAGTCCTTGGCTGAAAAGGATAGTCAGCAAGATGTTGAAACCACAAATGGTGACATCCACGTGGAATTCAATGGGTCAGGTCAATCAGAGGATAAAATCTCTGAACTGCCAAATACTGGAAATGGGAATGAGAGCCAGATAGGAGAAGGAACAAACAATAATGAAAATATCTCAGAAATTTTGAAGCAGATGAGGCTTGAGGAAGATTCATTAAATGCTCTTCATATGAGCGCCTCCACAAAAGAAGGGTCTGATGAAAGTGAAGGGGAGAATGCAGTGGCTGTTGAGGGCACCAAAGATGCAGAAAAGGATGAAATGGAGCACATGGAAGATGCAAGTCAGACCAATGAAAGTGTCGACATGTCAAATGTAGATGATGTTAGCAGTGATCAGAGTTGGATGCTGAGGTCCTTGTCTGAATCAAGTGTAGCTTGTGTCACTGGCGATTATGCAATGCAGAACGTTCTTCTGCAAATGGGTTTACGATTGTTGGCTCCTGGAGGAATGCAGATCCGGCAACTTCACAGGTATGTATATTTAGTGGGCGATCTGATATTATGTGTGCCTCAACACTTTGTTAATTCACTAATTATCAATTGTTTAACCAACTTCATCAGTCAAAAACTACAACTTTTATTCCCTTTTCTGATCCACCTGAGTTCTGACAACCCCCAACAACCTTTGTCCAACCGATGGTTTAGTCGTTTTCATTTCTTACAACTCTAGCTAACTTTTAGGCTTATGAGTCGGTGTTAATTCTGCCTTGTATATTGATTGAGTAGCTTGTGATTAAGTCATCATGTAATGCAATTACGTACCCAAATGTTTACAATATGTGCTCTCAGGTGGATTTTGAAATGCCACGCCTGCTACAATGTCACAGCTGAAATTGGAAGGATATTTTGCCCAAAGTGTGGAAATGGTGGAACTTTGCGCAAGGTAGCTGTTACAGTTGGCGAGAATGGAGTTGTGTTAGCTGCCCGTAAGCCAAGGATTACTCTGCGAGGCACAAAAGTGAGTATTCCTCAGTGTTGTCCTTGAGAATAATATATATATATATACACATAATTTTAATATTAGATGTTTTTACTCACGAACAGTCTGATAATCAGTGGATTGTTTTAAATTTTAAGGCTACTCTAACCATCTTGAGGTATGCATTTTTTTTTCCTTTTATGTACAGTTTTCACTTCCCCTACCGCAAGGTGGAAGGGATGCCATTACCAAAAATCTTGTTTTACGTGAAGATCAACTCCCACAGAAGTTTCTTCATCCAAAAACCAAGAAGAAAGTCAATAAGCAGGTTCTTTTCAATCAAACTTGCCTTTCGTTTTTTATCATTATCCTGTCATTTTCTTCAAGATTTCACCTGAACTTCACATAACCAAGTAATCTATTTTCCATTTTTTTACCATTTTTCAGGGCGATGAATTTTTTGCTGTGGATGATTTCTTCAGCCACCACAATACTGACAAGAGAGCTCCTTTGCAGCCTCCCGTAAGGCAAGCTTTGGCTGTCTTCAGTGGAAAGAGAAATCCAAATGATAACCATTACTCTCGATCTAAGCATAGATAGAACTATTATTTATGGATTTTGATGTTCATTACTGTTTTCAGAATATCTTATGTGATTGAGTTATATTGTATTCAAAGTCTAAAGCTCAGCTTAAATGAGTGCAGTTTTGTCCTGAATTTTCTTCAAATTATTTGTTCAAGGCTGATTTATTATTTATTTCCTCAATTTCAGGGTTTGTTGGTTTCTTGACAAATTTCGGCCTATAATTCATAAATACTAAAGGGATATTTTTTAAATAGCAAAATAAACTAAAATATTTACGAAATA

mRNA sequence

ATGGAGACCCCTTCTCCGGCTTCATGCTGGAGCAATGTTGTGAAAACTCAACCAGCACCGAAGCCTCAGCATCAGACTCCGTCCTCCTCCGTTCAAGTGTTCGCCGATAGCTGTAAGTCCAGTAAAGGCGTTGCTGTTGCCGTTGTTGATGCCAACGCCATTATCCAAGGAGGAGACAAGCTTTCCTCCTCTGCCGATAAGTTTGTTTCAGTTCCTGAGGTTTTGGATGAGATTCGTGATCCCGTGTCTCGCCATAGGCTCGCCTTTGTTCCCTTCACTCTTGAATCCATGGATCCCTCTCCTGACGCTCTTAATAAAGTAATCAAGTTTGCAAGGGCTACTGGTGACTTACAGACGCTTTCAGATGTTGATATTAAACTTATTGCTCTCACTTACACATTGGAGACTCAGATTCATGGGACTAAACATCTTCGTGAGTGTCCTCCCCCTGTTCACATGGTTAATACAAAGAGGTTACCTGAGAAAGACATGCCTGGTTGGGGATCCAACGTTCCTAATCTGGAAGAATGGGAAGCGTTAGAGCAAGATGCTGATGATCCGTCCCGTTTGACATCAAAGATTCTGCCTCTGCAGGATTTAAACCTGAACATCATCCCTTCAGATGGCCAATCTGAAGATCTTTCACTAGAGCACAAGGATGATGATAACTTGGAGCATCTAGATGAAACTGAGAGTGATTCAAGAAGATCAAGGAGATATCCTCCGAAGAAGAAGGAAATTAATATTGAAGGGAAGAAGATGGTGGCCGATGGAATTGATGCATCTCAGGGACAATATGATGATAATGAGGGCGACTGGACACCTGCTGTCAGTCGAAGCACTCAGAGAAGGTATCATAGGAGGAAAGCTAGACGTGAATATTATGAGTCCTTGGCTGAAAAGGATAGTCAGCAAGATGTTGAAACCACAAATGGTGACATCCACGTGGAATTCAATGGGTCAGGTCAATCAGAGGATAAAATCTCTGAACTGCCAAATACTGGAAATGGGAATGAGAGCCAGATAGGAGAAGGAACAAACAATAATGAAAATATCTCAGAAATTTTGAAGCAGATGAGGCTTGAGGAAGATTCATTAAATGCTCTTCATATGAGCGCCTCCACAAAAGAAGGGTCTGATGAAAGTGAAGGGGAGAATGCAGTGGCTGTTGAGGGCACCAAAGATGCAGAAAAGGATGAAATGGAGCACATGGAAGATGCAAGTCAGACCAATGAAAGTGTCGACATGTCAAATGTAGATGATGTTAGCAGTGATCAGAGTTGGATGCTGAGGTCCTTGTCTGAATCAAGTGTAGCTTGTGTCACTGGCGATTATGCAATGCAGAACGTTCTTCTGCAAATGGGTTTACGATTGTTGGCTCCTGGAGGAATGCAGATCCGGCAACTTCACAGGTGGATTTTGAAATGCCACGCCTGCTACAATGTCACAGCTGAAATTGGAAGGATATTTTGCCCAAAGTGTGGAAATGGTGGAACTTTGCGCAAGGTAGCTGTTACAGTTGGCGAGAATGGAGTTGTGTTAGCTGCCCGTAAGCCAAGGATTACTCTGCGAGGCACAAAATTTTCACTTCCCCTACCGCAAGGTGGAAGGGATGCCATTACCAAAAATCTTGTTTTACGTGAAGATCAACTCCCACAGAAGTTTCTTCATCCAAAAACCAAGAAGAAAGTCAATAAGCAGGGCGATGAATTTTTTGCTGTGGATGATTTCTTCAGCCACCACAATACTGACAAGAGAGCTCCTTTGCAGCCTCCCGTAAGGCAAGCTTTGGCTGTCTTCAGTGGAAAGAGAAATCCAAATGATAACCATTACTCTCGATCTAAGCATAGATAG

Coding sequence (CDS)

ATGGAGACCCCTTCTCCGGCTTCATGCTGGAGCAATGTTGTGAAAACTCAACCAGCACCGAAGCCTCAGCATCAGACTCCGTCCTCCTCCGTTCAAGTGTTCGCCGATAGCTGTAAGTCCAGTAAAGGCGTTGCTGTTGCCGTTGTTGATGCCAACGCCATTATCCAAGGAGGAGACAAGCTTTCCTCCTCTGCCGATAAGTTTGTTTCAGTTCCTGAGGTTTTGGATGAGATTCGTGATCCCGTGTCTCGCCATAGGCTCGCCTTTGTTCCCTTCACTCTTGAATCCATGGATCCCTCTCCTGACGCTCTTAATAAAGTAATCAAGTTTGCAAGGGCTACTGGTGACTTACAGACGCTTTCAGATGTTGATATTAAACTTATTGCTCTCACTTACACATTGGAGACTCAGATTCATGGGACTAAACATCTTCGTGAGTGTCCTCCCCCTGTTCACATGGTTAATACAAAGAGGTTACCTGAGAAAGACATGCCTGGTTGGGGATCCAACGTTCCTAATCTGGAAGAATGGGAAGCGTTAGAGCAAGATGCTGATGATCCGTCCCGTTTGACATCAAAGATTCTGCCTCTGCAGGATTTAAACCTGAACATCATCCCTTCAGATGGCCAATCTGAAGATCTTTCACTAGAGCACAAGGATGATGATAACTTGGAGCATCTAGATGAAACTGAGAGTGATTCAAGAAGATCAAGGAGATATCCTCCGAAGAAGAAGGAAATTAATATTGAAGGGAAGAAGATGGTGGCCGATGGAATTGATGCATCTCAGGGACAATATGATGATAATGAGGGCGACTGGACACCTGCTGTCAGTCGAAGCACTCAGAGAAGGTATCATAGGAGGAAAGCTAGACGTGAATATTATGAGTCCTTGGCTGAAAAGGATAGTCAGCAAGATGTTGAAACCACAAATGGTGACATCCACGTGGAATTCAATGGGTCAGGTCAATCAGAGGATAAAATCTCTGAACTGCCAAATACTGGAAATGGGAATGAGAGCCAGATAGGAGAAGGAACAAACAATAATGAAAATATCTCAGAAATTTTGAAGCAGATGAGGCTTGAGGAAGATTCATTAAATGCTCTTCATATGAGCGCCTCCACAAAAGAAGGGTCTGATGAAAGTGAAGGGGAGAATGCAGTGGCTGTTGAGGGCACCAAAGATGCAGAAAAGGATGAAATGGAGCACATGGAAGATGCAAGTCAGACCAATGAAAGTGTCGACATGTCAAATGTAGATGATGTTAGCAGTGATCAGAGTTGGATGCTGAGGTCCTTGTCTGAATCAAGTGTAGCTTGTGTCACTGGCGATTATGCAATGCAGAACGTTCTTCTGCAAATGGGTTTACGATTGTTGGCTCCTGGAGGAATGCAGATCCGGCAACTTCACAGGTGGATTTTGAAATGCCACGCCTGCTACAATGTCACAGCTGAAATTGGAAGGATATTTTGCCCAAAGTGTGGAAATGGTGGAACTTTGCGCAAGGTAGCTGTTACAGTTGGCGAGAATGGAGTTGTGTTAGCTGCCCGTAAGCCAAGGATTACTCTGCGAGGCACAAAATTTTCACTTCCCCTACCGCAAGGTGGAAGGGATGCCATTACCAAAAATCTTGTTTTACGTGAAGATCAACTCCCACAGAAGTTTCTTCATCCAAAAACCAAGAAGAAAGTCAATAAGCAGGGCGATGAATTTTTTGCTGTGGATGATTTCTTCAGCCACCACAATACTGACAAGAGAGCTCCTTTGCAGCCTCCCGTAAGGCAAGCTTTGGCTGTCTTCAGTGGAAAGAGAAATCCAAATGATAACCATTACTCTCGATCTAAGCATAGATAG

Protein sequence

METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDKLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEALEQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRYPPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAEKDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMRLEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVFSGKRNPNDNHYSRSKHR*

Homology

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BLAST of CsaV3_5G002950 vs. NCBI nr
Match: XP_004143919.1 (RNA-binding protein NOB1 [Cucumis sativus] >KGN50114.1 hypothetical protein Csa_000110 [Cucumis sativus])

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 617/617 (100.00%), Postives = 617/617 (100.00%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK
Sbjct: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY
Sbjct: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR
Sbjct: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360

Query: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420
           LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD
Sbjct: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420

Query: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480
           DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY
Sbjct: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480

Query: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540
           NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI
Sbjct: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540

Query: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600
           TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF
Sbjct: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600

Query: 601 SGKRNPNDNHYSRSKHR 618
           SGKRNPNDNHYSRSKHR
Sbjct: 601 SGKRNPNDNHYSRSKHR 617

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BLAST of CsaV3_5G002950 vs. NCBI nr
Match: XP_008437247.1 (PREDICTED: RNA-binding protein NOB1 [Cucumis melo])

HSP 1 Score: 1149.4 bits (2972), Expect = 0.0e+00
Identity = 594/617 (96.27%), Postives = 601/617 (97.41%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           ME+PSPASCWSNVVKTQPAPKPQHQ+P+SSVQVFADSCKSSKGVAVAVVDANAIIQGGDK
Sbjct: 1   MESPSPASCWSNVVKTQPAPKPQHQSPTSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDADDPS LTSKILPLQDLNLN IPSDGQSEDLSLEHKD DN EHLDETESDSRRSRRY
Sbjct: 181 EQDADDPSSLTSKILPLQDLNLNTIPSDGQSEDLSLEHKDADNSEHLDETESDSRRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRY+RRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYNRRKARREYYESLAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KD QQD+ETTNGDI VE NGSGQSEDKISELPNTGNGNESQI E   NNEN+SEILKQMR
Sbjct: 301 KDIQQDIETTNGDIQVESNGSGQSEDKISELPNTGNGNESQIEEEMFNNENLSEILKQMR 360

Query: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420
           LEEDSLNALHMSASTKEGS ESEGEN +AVEG KDA KDEMEHMEDASQTNESVD SNVD
Sbjct: 361 LEEDSLNALHMSASTKEGS-ESEGEN-MAVEGIKDAVKDEMEHMEDASQTNESVDTSNVD 420

Query: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480
           DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY
Sbjct: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480

Query: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540
           NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI
Sbjct: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540

Query: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600
           TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF
Sbjct: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600

Query: 601 SGKRNPNDNHYSRSKHR 618
           SGKRNPNDNHYSRSKHR
Sbjct: 601 SGKRNPNDNHYSRSKHR 615

[Close]

BLAST of CsaV3_5G002950 vs. NCBI nr
Match: KAA0042772.1 (RNA-binding protein NOB1 [Cucumis melo var. makuwa])

HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 593/617 (96.11%), Postives = 601/617 (97.41%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           ME+PSPASCWSNVVKTQPAPKPQHQ+P+SSVQVFADSCKSSKGVAVAVVDANAIIQGGDK
Sbjct: 1   MESPSPASCWSNVVKTQPAPKPQHQSPTSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDADDPS LTSKILPLQDLNLN IPSDGQSEDLSLEHKD DN EHLDETESDSRRSRRY
Sbjct: 181 EQDADDPSSLTSKILPLQDLNLNTIPSDGQSEDLSLEHKDADNSEHLDETESDSRRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRY+RRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYNRRKARREYYESLAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KD QQD+ETTNGDI VE NGSGQSEDKISELPNTGNGNESQI E   NNEN+SEILKQMR
Sbjct: 301 KDIQQDIETTNGDIQVESNGSGQSEDKISELPNTGNGNESQIEEEMFNNENLSEILKQMR 360

Query: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420
           LEEDSLNALHMSASTKEGS ESEGE+ +AVEG KDA KDEMEHMEDASQTNESVD SNVD
Sbjct: 361 LEEDSLNALHMSASTKEGS-ESEGED-MAVEGIKDAVKDEMEHMEDASQTNESVDTSNVD 420

Query: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480
           DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY
Sbjct: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480

Query: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540
           NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI
Sbjct: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540

Query: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600
           TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF
Sbjct: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600

Query: 601 SGKRNPNDNHYSRSKHR 618
           SGKRNPNDNHYSRSKHR
Sbjct: 601 SGKRNPNDNHYSRSKHR 615

[Close]

BLAST of CsaV3_5G002950 vs. NCBI nr
Match: XP_038875873.1 (RNA-binding protein NOB1 [Benincasa hispida])

HSP 1 Score: 1137.5 bits (2941), Expect = 0.0e+00
Identity = 585/618 (94.66%), Postives = 598/618 (96.76%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           ME+PSPASCWSNVVK+QPAPKPQ QTP+SSVQVFADSCKSSKGVAVAVVDANAIIQGGDK
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQLQTPTSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDADDPS  TSKILPLQDLNLNIIPSDGQSEDLSLEHKD+ NLEH DETES S RSRRY
Sbjct: 181 EQDADDPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEHKDESNLEHQDETESGSTRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KD QQDVETT+GDI VE NGSGQS+DKISELPNTG+GNE QI EGTNNNEN+SEILKQMR
Sbjct: 301 KDCQQDVETTDGDIQVETNGSGQSQDKISELPNTGDGNEGQIEEGTNNNENLSEILKQMR 360

Query: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420
           LEEDSLNALH+SASTKE S ESEGENAVAVEGT D  KDE+EHMEDASQTNESVD SNVD
Sbjct: 361 LEEDSLNALHVSASTKEESGESEGENAVAVEGTNDTVKDELEHMEDASQTNESVDTSNVD 420

Query: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480
           DVSSDQSWMLRSLSESSVACVTGD+AMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY
Sbjct: 421 DVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480

Query: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540
           NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI
Sbjct: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540

Query: 541 TKNLVLREDQLPQKFLHPKTKKKVNK-QGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAV 600
           TKNLVLREDQLPQKFLHPKTKKKV+K QGDE FAVDDFFSHHNTDKRAPLQPPVRQALAV
Sbjct: 541 TKNLVLREDQLPQKFLHPKTKKKVHKQQGDELFAVDDFFSHHNTDKRAPLQPPVRQALAV 600

Query: 601 FSGKRNPNDNHYSRSKHR 618
           FSGKRNPNDNHYSRSKH+
Sbjct: 601 FSGKRNPNDNHYSRSKHK 618

[Close]

BLAST of CsaV3_5G002950 vs. NCBI nr
Match: XP_023533425.1 (RNA-binding protein NOB1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533427.1 RNA-binding protein NOB1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1082.4 bits (2798), Expect = 0.0e+00
Identity = 556/620 (89.68%), Postives = 584/620 (94.19%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           ME+PSPASCWSNVVK+QPAPKPQHQTP+S+VQVFADSCKSS+GVAVAVVDANAIIQGG+K
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LS+ ADKFVSVPEVLDE+RDPVSRHRLAFVPFTLESMDPSP+ALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDAD P   TSKILPLQDLNLNI+PSDGQSEDLSLEHKD+ N EH DETES SRRSR+Y
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSDGQSEDLSLEHKDEHNSEHQDETESGSRRSRKY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRY RRKARREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KDSQQDVETT+GD+ VE N SGQS+D+ISE P TGNGN+ QI EGTNNNEN+SEIL QMR
Sbjct: 301 KDSQQDVETTDGDVLVENNRSGQSQDQISE-PITGNGNDCQIAEGTNNNENLSEILNQMR 360

Query: 361 LEEDSLNALHM---SASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMS 420
           LEEDSLNA HM    AS KE  D SE EN VAVEG  D  KDEMEH+E +SQTNESVD S
Sbjct: 361 LEEDSLNAFHMEGLDASKKEELDISEVENIVAVEGMNDTAKDEMEHLEYSSQTNESVDTS 420

Query: 421 NVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH 480
           N+DD+SSDQSWMLRSLSESSVACVTGD+AMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH
Sbjct: 421 NIDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH 480

Query: 481 ACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGR 540
           ACYNVTAEIG+IFCPKCGNGGTLRKVAVTVGENGVVLA+RKPRITLRGTKFSLPLPQGGR
Sbjct: 481 ACYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGR 540

Query: 541 DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQAL 600
           DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQAL
Sbjct: 541 DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQAL 600

Query: 601 AVFSGKRNPNDNHYSRSKHR 618
           AVFSGKRNPNDNHYSRS H+
Sbjct: 601 AVFSGKRNPNDNHYSRSHHK 619

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy Swiss-Prot
Match: Q9FLL1 (RNA-binding NOB1-like protein OS=Arabidopsis thaliana OX=3702 GN=NOB1 PE=1 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 2.9e-199
Identity = 370/624 (59.29%), Postives = 470/624 (75.32%), Query Frame = 0


Query: 4   PSPASCWSNVVKTQPAPKPQ-HQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDKLS 63
           P P S WS++VK  P  KP  +    +++     +CKS+KG+++AVVDANAII+G   L+
Sbjct: 3   PKPTSMWSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSLT 62

Query: 64  SSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTLSD 123
           + ADKFV+VPEVL EIRDP SR RLAF+PFT+++M+PSP++L+KVIKFARATGDLQ+LSD
Sbjct: 63  NFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLSD 122

Query: 124 VDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEALEQ 183
           VD+KLIAL+YTLE Q++GTK+LR+ PPP+  V  KRLPEKD+PGWGSNV NLEEWEALE 
Sbjct: 123 VDLKLIALSYTLEAQVYGTKNLRDVPPPIQTVRVKRLPEKDLPGWGSNVANLEEWEALEN 182

Query: 184 DADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRYPP 243
           + ++ S   SKILPL+DLN+NII SD  SE  S+    ++   H ++ +   ++ RRYPP
Sbjct: 183 ETEEKSNANSKILPLKDLNMNIIASDNVSEVGSVVSHTEN---HEEDVQEGGKKHRRYPP 242

Query: 244 KKKEINIEGKKMVADGIDASQGQYDDNE--GDWTPAVSRSTQRRYHRRKARREYYESLAE 303
           KK EI +EG KMV +G+DASQGQYDD++   DW PAVSRST  +Y RRKAR E+Y +LAE
Sbjct: 243 KKTEIKLEG-KMVVEGVDASQGQYDDDDDASDWRPAVSRSTHSKYLRRKARWEHYNALAE 302

Query: 304 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 363
           ++ Q+D                Q  DK     +T   NE+   +   N E+IS ILK MR
Sbjct: 303 QEIQKD----------------QEADKAR---HTKEANETHAKDSGKNGEDISSILKDMR 362

Query: 364 LEEDSLNAL-------HMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNES 423
           LEE+SL AL       +  A+   G D+ + +  V  EG  D     +E++E AS+  ++
Sbjct: 363 LEEESLRALQEETEETNAEATLINGEDDIDHDIEVEAEGI-DVANQALENLEIASEAEDT 422

Query: 424 VDMSNV-DDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRW 483
            + S++ DD SS+QSW LR+LSESSVAC+TGDYAMQNV+LQMGLRLLAPGGMQIRQLHRW
Sbjct: 423 FEASSIGDDGSSEQSWSLRALSESSVACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRW 482

Query: 484 ILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPL 543
           ILKCHACY VT EIGRIFCPKCGNGGTLRKVAVT+G NG ++AA KPRITLRGT++S+P+
Sbjct: 483 ILKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGANGAIIAACKPRITLRGTQYSIPM 542

Query: 544 PQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPP 603
           P+GGR+AITKNL+LREDQLPQK LHP+TKKK +K GDE+F  DD F +H++D++APLQPP
Sbjct: 543 PKGGREAITKNLILREDQLPQKLLHPRTKKKASKPGDEYFVSDDVFLNHHSDRKAPLQPP 602

Query: 604 VRQALAVFSGKRNPNDNHYSRSKH 617
           VR+A++VFS KRNPNDNHYSRS H
Sbjct: 603 VRKAMSVFSQKRNPNDNHYSRSMH 602

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy Swiss-Prot
Match: Q4R537 (RNA-binding protein NOB1 OS=Macaca fascicularis OX=9541 GN=NOB1 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-29
Identity = 145/571 (25.39%), Postives = 228/571 (39.93%), Query Frame = 0


Query: 48  VVDANAIIQGGDKLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKV 107
           V DA A ++    L        ++ EV+ EIRD  +R RLA +P+ L   +P P  +  V
Sbjct: 8   VADAGAFLRDA-ALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPQYVRLV 67

Query: 108 IKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGW 167
            +F++ TGD  +LS  DI+++ALTY LE +  G  HL++ P  V + ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEE--WEALE-QDADDPSRLTSKILPLQDLNLNIIPS-DGQSEDLSLEHKDDDN 227
           G ++P+  +   EA +   A +P  L            N +PS D + ++L ++  +D  
Sbjct: 128 GFHLPSKPKSPQEAEKGHPACEPENLEFSSFMFW---RNPLPSIDHELQELLIDRSED-- 187

Query: 228 LEHLDETESDSRRSRRYPPKKKEINIEGKKMVADGIDASQGQYDDNEGDW-TPAVSRSTQ 287
                             P K+E   E      +G +  +   DD+ G W TP       
Sbjct: 188 -----------------VPSKEEEEAE------NGFEDRKDDSDDDGGGWITP------- 247

Query: 288 RRYHRRKARREYYESLAEKDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQI 347
                                                                       
Sbjct: 248 ------------------------------------------------------------ 307

Query: 348 GEGTNNNENISEILKQMRLEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEME 407
               NN + I + L+Q                                    D  KD   
Sbjct: 308 ----NNIKQIQQELEQC-----------------------------------DVPKD--- 367

Query: 408 HMEDASQTNESVDMSNVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPG 467
                                              V CVT D+AMQNVLLQMGL +LA  
Sbjct: 368 ---------------------------------VRVGCVTTDFAMQNVLLQMGLHVLAVN 402

Query: 468 GMQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLA--ARKPR 527
           GM IR+   +IL+CH C+  T+++ R+FC  CGN  TL+KV+VTV ++G +    +R P+
Sbjct: 428 GMLIREARSYILRCHGCFKTTSDMSRVFCAHCGN-KTLKKVSVTVSDDGALHMHFSRNPK 402

Query: 528 I-TLRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFA-VDDFF 587
           +   RG ++SLP P+GG+ A+  +L   + + PQ  L  K ++K N    ++ A V  F 
Sbjct: 488 VLNPRGLRYSLPTPKGGKYAVNPHLT-EDQRFPQLRLSRKARQKTNVFAPDYIAGVSPFV 402

Query: 588 SHHNTDKRAPLQPPVRQALAVFSGKRNPNDN 610
            +  + + A LQ  VR +  + +G+R  N N
Sbjct: 548 ENDVSSRSATLQ--VRDS-TLGAGRRRLNPN 402

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy Swiss-Prot
Match: Q6VEU1 (RNA-binding protein NOB1 OS=Rattus norvegicus OX=10116 GN=Nob1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.2e-29
Identity = 143/573 (24.96%), Postives = 231/573 (40.31%), Query Frame = 0


Query: 48  VVDANAIIQGGDKLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKV 107
           V DA A ++    L        ++ EV+ EIRD  +R RLA +P+ L   +P P+ +  V
Sbjct: 8   VADAGAFLRDA-PLQDIGKNIYTIREVVREIRDKATRRRLAVLPYELRFKEPFPEYVRLV 67

Query: 108 IKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGW 167
            +F++ TGD  +LS  DI+++ALTY LE +  G  HL++ P  V + ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKKEPEKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEEWEALEQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHL 227
           G ++P+  + +AL++  D                    P+DG SE+L             
Sbjct: 128 GFHLPS--KSKALQETVDHGP-----------------PADG-SENL------------- 187

Query: 228 DETESDSRRSRRYPPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHR 287
              E  S    R P     I+ E ++++ DG                             
Sbjct: 188 ---EFSSFMFWRNP--LPNIDHELQQLLIDG----------------------------- 247

Query: 288 RKARREYYESLAEKDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTN 347
              R E  E   E++ + ++E ++ D                             G G  
Sbjct: 248 ---REEEEEEEEEEEEEDELEDSDDD-----------------------------GGGWI 307

Query: 348 NNENISEILKQMRLEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDA 407
              NI +I                         + E E         D  KD        
Sbjct: 308 TPSNIKQI-------------------------QHESEQC-------DIPKD-------- 367

Query: 408 SQTNESVDMSNVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIR 467
                                         V CVT D+AMQNVLLQMGL +LA  GM +R
Sbjct: 368 ----------------------------VQVGCVTTDFAMQNVLLQMGLHVLAVNGMLVR 410

Query: 468 QLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLA--ARKPRI-TLR 527
           +   +IL+CH C+  T+++ R+FC  CGN  TL+KV+VT+ ++G +    +R P++   R
Sbjct: 428 EARSYILRCHGCFKTTSDMNRVFCGHCGN-KTLKKVSVTINDDGTLHMHFSRNPKVLNPR 410

Query: 528 GTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTD 587
           G ++SLP P+GG+ A+  +L   + + PQ  L  K ++K N    ++ A    F+ ++  
Sbjct: 488 GLRYSLPTPKGGKYAVNPHLT-EDQRFPQLRLSHKARQKTNVFAPDYIAGVSPFAENDIS 410

Query: 588 KRAPLQPPVRQALAVFSGKRNPNDNHYSRSKHR 618
            R+ +       L     + NPN +     K R
Sbjct: 548 SRSAILQVRDSMLGAGRRRLNPNASRKKFVKKR 410

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy Swiss-Prot
Match: Q5RBB3 (RNA-binding protein NOB1 OS=Pongo abelii OX=9601 GN=NOB1 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-28
Identity = 142/568 (25.00%), Postives = 226/568 (39.79%), Query Frame = 0


Query: 48  VVDANAIIQGGDKLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKV 107
           V DA A ++    L        ++ EV+ EIRD  +R RLA +P+ L   +P P+ +  V
Sbjct: 8   VADAGAFLRDA-ALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLV 67

Query: 108 IKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGW 167
            +F++ TGD  +LS  DI+++ALTY LE +  G  HL++ P  V + ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEEWEALEQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEH- 227
           G ++P+  +          P + T K  P  +      P + +            N++H 
Sbjct: 128 GFHLPSKPK----------PPQETEKGHPACE------PENLEFSSFMFWRNPLPNIDHE 187

Query: 228 LDETESDSRRSRRYPPKKKEINIEGKKMVADGIDASQGQYDDNEGDW-TPAVSRSTQRRY 287
           L E   D  R    P  ++E          +G +  +   DD+ G W TP          
Sbjct: 188 LQELLID--RGEDIPSDEEE--------EENGFEDRRDDSDDDGGGWITP---------- 247

Query: 288 HRRKARREYYESLAEKDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEG 347
                                                                       
Sbjct: 248 ------------------------------------------------------------ 307

Query: 348 TNNNENISEILKQMRLEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHME 407
            +N + I + L+Q  + ED                                         
Sbjct: 308 -SNIKQIQQELEQCDVPED----------------------------------------- 367

Query: 408 DASQTNESVDMSNVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQ 467
                                           V CVT D+AMQNVLLQMGL +LA  GM 
Sbjct: 368 ------------------------------VRVGCVTTDFAMQNVLLQMGLHVLAVNGML 401

Query: 468 IRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLA--ARKPRI-T 527
           IR+   +IL+CH C+  T+++ R+FC  CGN  TL+KV+VTV ++G +    +R P++  
Sbjct: 428 IREARSYILRCHGCFKTTSDMSRVFCSHCGN-KTLKKVSVTVSDDGTLHMHFSRNPKVLN 401

Query: 528 LRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFA-VDDFFSHH 587
            RG ++SLP P+GG+ AI  +L   + + PQ  L  K ++K N    ++ A V  F  + 
Sbjct: 488 PRGLRYSLPTPKGGKYAINPHLT-EDQRFPQLRLSRKARQKTNVFAPDYVAGVSPFVEND 401

Query: 588 NTDKRAPLQPPVRQALAVFSGKRNPNDN 610
            + + A LQ  VR + ++ +G+R  N N
Sbjct: 548 ISSRSATLQ--VRDS-SLGAGRRRLNPN 401

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy Swiss-Prot
Match: Q9ULX3 (RNA-binding protein NOB1 OS=Homo sapiens OX=9606 GN=NOB1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-28
Identity = 139/571 (24.34%), Postives = 226/571 (39.58%), Query Frame = 0


Query: 48  VVDANAIIQGGDKLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKV 107
           V DA A ++    L        ++ EV+ EIRD  +R RLA +P+ L   +P P+ +  V
Sbjct: 8   VADAGAFLRHA-ALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLV 67

Query: 108 IKFARATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGW 167
            +F++ TGD  +LS  DI+++ALTY LE +  G  HL++ P  V + ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNL----EEWEALEQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDN 227
           G ++P      +E E      +  +   S  +  ++   NI   D + ++L ++  +D  
Sbjct: 128 GFHLPYKPKPPQETEKGHSACEPENLEFSSFMFWRNPLPNI---DHELQELLIDRGEDVP 187

Query: 228 LEHLDETESDSRRSRRYPPKKKEINIEGKKMVADGIDASQGQYDDNEGDW-TPAVSRSTQ 287
            E  +E E                         +G +  +   DD+ G W TP       
Sbjct: 188 SEEEEEEE-------------------------NGFEDRKDDSDDDGGGWITP------- 247

Query: 288 RRYHRRKARREYYESLAEKDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQI 347
                                                                       
Sbjct: 248 ------------------------------------------------------------ 307

Query: 348 GEGTNNNENISEILKQMRLEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEME 407
               +N + I + L+Q  + ED                                      
Sbjct: 308 ----SNIKQIQQELEQCDVPED-------------------------------------- 367

Query: 408 HMEDASQTNESVDMSNVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPG 467
                                              V C+T D+AMQNVLLQMGL +LA  
Sbjct: 368 ---------------------------------VRVGCLTTDFAMQNVLLQMGLHVLAVN 402

Query: 468 GMQIRQLHRWILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLA--ARKPR 527
           GM IR+   +IL+CH C+  T+++ R+FC  CGN  TL+KV+VTV ++G +    +R P+
Sbjct: 428 GMLIREARSYILRCHGCFKTTSDMSRVFCSHCGN-KTLKKVSVTVSDDGTLHMHFSRNPK 402

Query: 528 I-TLRGTKFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFA-VDDFF 587
           +   RG ++SLP P+GG+ AI  +L   + + PQ  L  K ++K N    ++ A V  F 
Sbjct: 488 VLNPRGLRYSLPTPKGGKYAINPHLT-EDQRFPQLRLSQKARQKTNVFAPDYIAGVSPFV 402

Query: 588 SHHNTDKRAPLQPPVRQALAVFSGKRNPNDN 610
            +  + + A LQ  VR +  + +G+R  N N
Sbjct: 548 ENDISSRSATLQ--VRDS-TLGAGRRRLNPN 402

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy TrEMBL
Match: A0A0A0KML5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154760 PE=3 SV=1)

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 617/617 (100.00%), Postives = 617/617 (100.00%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK
Sbjct: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY
Sbjct: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR
Sbjct: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360

Query: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420
           LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD
Sbjct: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420

Query: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480
           DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY
Sbjct: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480

Query: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540
           NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI
Sbjct: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540

Query: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600
           TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF
Sbjct: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600

Query: 601 SGKRNPNDNHYSRSKHR 618
           SGKRNPNDNHYSRSKHR
Sbjct: 601 SGKRNPNDNHYSRSKHR 617

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy TrEMBL
Match: A0A1S3ATJ5 (RNA-binding protein NOB1 OS=Cucumis melo OX=3656 GN=LOC103482733 PE=3 SV=1)

HSP 1 Score: 1149.4 bits (2972), Expect = 0.0e+00
Identity = 594/617 (96.27%), Postives = 601/617 (97.41%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           ME+PSPASCWSNVVKTQPAPKPQHQ+P+SSVQVFADSCKSSKGVAVAVVDANAIIQGGDK
Sbjct: 1   MESPSPASCWSNVVKTQPAPKPQHQSPTSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDADDPS LTSKILPLQDLNLN IPSDGQSEDLSLEHKD DN EHLDETESDSRRSRRY
Sbjct: 181 EQDADDPSSLTSKILPLQDLNLNTIPSDGQSEDLSLEHKDADNSEHLDETESDSRRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRY+RRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYNRRKARREYYESLAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KD QQD+ETTNGDI VE NGSGQSEDKISELPNTGNGNESQI E   NNEN+SEILKQMR
Sbjct: 301 KDIQQDIETTNGDIQVESNGSGQSEDKISELPNTGNGNESQIEEEMFNNENLSEILKQMR 360

Query: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420
           LEEDSLNALHMSASTKEGS ESEGEN +AVEG KDA KDEMEHMEDASQTNESVD SNVD
Sbjct: 361 LEEDSLNALHMSASTKEGS-ESEGEN-MAVEGIKDAVKDEMEHMEDASQTNESVDTSNVD 420

Query: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480
           DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY
Sbjct: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480

Query: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540
           NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI
Sbjct: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540

Query: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600
           TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF
Sbjct: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600

Query: 601 SGKRNPNDNHYSRSKHR 618
           SGKRNPNDNHYSRSKHR
Sbjct: 601 SGKRNPNDNHYSRSKHR 615

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy TrEMBL
Match: A0A5A7TH94 (RNA-binding protein NOB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002720 PE=3 SV=1)

HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 593/617 (96.11%), Postives = 601/617 (97.41%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           ME+PSPASCWSNVVKTQPAPKPQHQ+P+SSVQVFADSCKSSKGVAVAVVDANAIIQGGDK
Sbjct: 1   MESPSPASCWSNVVKTQPAPKPQHQSPTSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDADDPS LTSKILPLQDLNLN IPSDGQSEDLSLEHKD DN EHLDETESDSRRSRRY
Sbjct: 181 EQDADDPSSLTSKILPLQDLNLNTIPSDGQSEDLSLEHKDADNSEHLDETESDSRRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRY+RRKARREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYNRRKARREYYESLAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KD QQD+ETTNGDI VE NGSGQSEDKISELPNTGNGNESQI E   NNEN+SEILKQMR
Sbjct: 301 KDIQQDIETTNGDIQVESNGSGQSEDKISELPNTGNGNESQIEEEMFNNENLSEILKQMR 360

Query: 361 LEEDSLNALHMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMSNVD 420
           LEEDSLNALHMSASTKEGS ESEGE+ +AVEG KDA KDEMEHMEDASQTNESVD SNVD
Sbjct: 361 LEEDSLNALHMSASTKEGS-ESEGED-MAVEGIKDAVKDEMEHMEDASQTNESVDTSNVD 420

Query: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480
           DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY
Sbjct: 421 DVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACY 480

Query: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540
           NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI
Sbjct: 481 NVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAI 540

Query: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600
           TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF
Sbjct: 541 TKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVF 600

Query: 601 SGKRNPNDNHYSRSKHR 618
           SGKRNPNDNHYSRSKHR
Sbjct: 601 SGKRNPNDNHYSRSKHR 615

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy TrEMBL
Match: A0A6J1H071 (RNA-binding protein NOB1-like OS=Cucurbita moschata OX=3662 GN=LOC111459243 PE=3 SV=1)

HSP 1 Score: 1078.2 bits (2787), Expect = 0.0e+00
Identity = 554/620 (89.35%), Postives = 582/620 (93.87%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           ME+P PASCWSNVVK+QPAPKPQHQTP+S+VQVFADSCKSS+GVAVAVVDANAIIQGG+K
Sbjct: 1   MESPYPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LS+ ADKFVSVPEVLDE+RDPVSRHRLAFVPFTLESMDPSP+ALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDAD P   TSKILPLQDLNLNI+PSDGQSEDLSLEHKD+ N EH DETES SRRSRRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSDGQSEDLSLEHKDEHNSEHPDETESGSRRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRY RRKARREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KDSQQDVETT+GD+ VE N SGQS+D+ISE P TGNGN+ QI EGTNNNEN+SEIL QMR
Sbjct: 301 KDSQQDVETTDGDVLVENNRSGQSQDQISE-PITGNGNDCQIAEGTNNNENLSEILNQMR 360

Query: 361 LEEDSLNALHM---SASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMS 420
           LEEDSLNA HM    AS KE  D SE EN VA EG  D  KDEMEH+E +SQTNESVD S
Sbjct: 361 LEEDSLNAFHMEGLDASKKEELDISEVENIVAAEGINDTAKDEMEHLEYSSQTNESVDTS 420

Query: 421 NVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH 480
           N+DD+SSDQSWMLRSLSESSVACVTGD+AMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH
Sbjct: 421 NIDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH 480

Query: 481 ACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGR 540
           ACYNVTAEIG+IFCPKCGNGGTLRKVAVTVGENGVVLA+RKPRITLRGTKFSLPLPQGGR
Sbjct: 481 ACYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGR 540

Query: 541 DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQAL 600
           DAITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FFAVDDFFSHHNTDKRAPLQPPVRQAL
Sbjct: 541 DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQAL 600

Query: 601 AVFSGKRNPNDNHYSRSKHR 618
           AVFSGKRNPNDNHYSRS H+
Sbjct: 601 AVFSGKRNPNDNHYSRSHHK 619

[Close]

BLAST of CsaV3_5G002950 vs. ExPASy TrEMBL
Match: A0A6J1K514 (RNA-binding protein NOB1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490817 PE=3 SV=1)

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 553/620 (89.19%), Postives = 581/620 (93.71%), Query Frame = 0


Query: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60
           ME+PSPASCWSNVVK+QPAPKPQHQTP+S+VQVFADSCKSS+GVAVAVVDANAIIQGG+K
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120
           LS+ ADKFVSVPEVLDE+RDPVSRHRLAFVPFTLESMDPSP+ALNKVIKFARATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240
           EQDAD P   TSKILPLQDLNLNI+PS GQSEDLSLEHKD+ N EH DETES SRRSRRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSGGQSEDLSLEHKDEHNSEHQDETESGSRRSRRY 240

Query: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300
           PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRY RRKARREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360
           KDSQQDVETT GD+ VE N SGQS+D+ISE P TGNGN+ QI EGTNNNEN+SEIL QMR
Sbjct: 301 KDSQQDVETTEGDVLVENNRSGQSQDQISE-PITGNGNDCQIAEGTNNNENLSEILNQMR 360

Query: 361 LEEDSLNALHM---SASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMS 420
           LEEDSLNA HM    A  KE  D SE EN VAVEG  D  KDEMEH+E +SQTNESVD S
Sbjct: 361 LEEDSLNAFHMEGLGALKKEELDTSEVENIVAVEGMNDTAKDEMEHLEYSSQTNESVDTS 420

Query: 421 NVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH 480
           N+DD+SSDQSWMLRSLSESSVACVTGD+AMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH
Sbjct: 421 NIDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH 480

Query: 481 ACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGR 540
           ACYNVTAEIG+IFCPKCGNGGTLRKVAVTVGENGVVLA+RKPRITLRGTKFSLPLPQGGR
Sbjct: 481 ACYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGR 540

Query: 541 DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQAL 600
           DAITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FFAVDDFFSHHNTDKRAPLQPPVRQAL
Sbjct: 541 DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQAL 600

Query: 601 AVFSGKRNPNDNHYSRSKHR 618
           AVFSGKRNPNDNH+SRS H+
Sbjct: 601 AVFSGKRNPNDNHFSRSHHK 619

[Close]

BLAST of CsaV3_5G002950 vs. TAIR 10
Match: AT5G41190.1 (CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 696.4 bits (1796), Expect = 2.0e-200
Identity = 370/624 (59.29%), Postives = 470/624 (75.32%), Query Frame = 0


Query: 4   PSPASCWSNVVKTQPAPKPQ-HQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDKLS 63
           P P S WS++VK  P  KP  +    +++     +CKS+KG+++AVVDANAII+G   L+
Sbjct: 3   PKPTSMWSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSLT 62

Query: 64  SSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTLSD 123
           + ADKFV+VPEVL EIRDP SR RLAF+PFT+++M+PSP++L+KVIKFARATGDLQ+LSD
Sbjct: 63  NFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLSD 122

Query: 124 VDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEALEQ 183
           VD+KLIAL+YTLE Q++GTK+LR+ PPP+  V  KRLPEKD+PGWGSNV NLEEWEALE 
Sbjct: 123 VDLKLIALSYTLEAQVYGTKNLRDVPPPIQTVRVKRLPEKDLPGWGSNVANLEEWEALEN 182

Query: 184 DADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRYPP 243
           + ++ S   SKILPL+DLN+NII SD  SE  S+    ++   H ++ +   ++ RRYPP
Sbjct: 183 ETEEKSNANSKILPLKDLNMNIIASDNVSEVGSVVSHTEN---HEEDVQEGGKKHRRYPP 242

Query: 244 KKKEINIEGKKMVADGIDASQGQYDDNE--GDWTPAVSRSTQRRYHRRKARREYYESLAE 303
           KK EI +EG KMV +G+DASQGQYDD++   DW PAVSRST  +Y RRKAR E+Y +LAE
Sbjct: 243 KKTEIKLEG-KMVVEGVDASQGQYDDDDDASDWRPAVSRSTHSKYLRRKARWEHYNALAE 302

Query: 304 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 363
           ++ Q+D                Q  DK     +T   NE+   +   N E+IS ILK MR
Sbjct: 303 QEIQKD----------------QEADKAR---HTKEANETHAKDSGKNGEDISSILKDMR 362

Query: 364 LEEDSLNAL-------HMSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNES 423
           LEE+SL AL       +  A+   G D+ + +  V  EG  D     +E++E AS+  ++
Sbjct: 363 LEEESLRALQEETEETNAEATLINGEDDIDHDIEVEAEGI-DVANQALENLEIASEAEDT 422

Query: 424 VDMSNV-DDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRW 483
            + S++ DD SS+QSW LR+LSESSVAC+TGDYAMQNV+LQMGLRLLAPGGMQIRQLHRW
Sbjct: 423 FEASSIGDDGSSEQSWSLRALSESSVACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRW 482

Query: 484 ILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPL 543
           ILKCHACY VT EIGRIFCPKCGNGGTLRKVAVT+G NG ++AA KPRITLRGT++S+P+
Sbjct: 483 ILKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGANGAIIAACKPRITLRGTQYSIPM 542

Query: 544 PQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPP 603
           P+GGR+AITKNL+LREDQLPQK LHP+TKKK +K GDE+F  DD F +H++D++APLQPP
Sbjct: 543 PKGGREAITKNLILREDQLPQKLLHPRTKKKASKPGDEYFVSDDVFLNHHSDRKAPLQPP 602

Query: 604 VRQALAVFSGKRNPNDNHYSRSKH 617
           VR+A++VFS KRNPNDNHYSRS H
Sbjct: 603 VRKAMSVFSQKRNPNDNHYSRSMH 602

The following BLAST results are available for this feature:

BLAST of CsaV3_5G002950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143919.1	0.0e+00	100.00	RNA-binding protein NOB1 [Cucumis sativus] >KGN50114.1 hypothetical protein Csa_...	[more]
XP_008437247.1	0.0e+00	96.27	PREDICTED: RNA-binding protein NOB1 [Cucumis melo]	[more]
KAA0042772.1	0.0e+00	96.11	RNA-binding protein NOB1 [Cucumis melo var. makuwa]	[more]
XP_038875873.1	0.0e+00	94.66	RNA-binding protein NOB1 [Benincasa hispida]	[more]
XP_023533425.1	0.0e+00	89.68	RNA-binding protein NOB1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533...	[more]

BLAST of CsaV3_5G002950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLL1	2.9e-199	59.29	RNA-binding NOB1-like protein OS=Arabidopsis thaliana OX=3702 GN=NOB1 PE=1 SV=1	[more]
Q4R537	2.8e-29	25.39	RNA-binding protein NOB1 OS=Macaca fascicularis OX=9541 GN=NOB1 PE=2 SV=1	[more]
Q6VEU1	6.2e-29	24.96	RNA-binding protein NOB1 OS=Rattus norvegicus OX=10116 GN=Nob1 PE=2 SV=1	[more]
Q5RBB3	1.1e-28	25.00	RNA-binding protein NOB1 OS=Pongo abelii OX=9601 GN=NOB1 PE=2 SV=1	[more]
Q9ULX3	2.4e-28	24.34	RNA-binding protein NOB1 OS=Homo sapiens OX=9606 GN=NOB1 PE=1 SV=1	[more]

BLAST of CsaV3_5G002950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KML5	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154760 PE=3 SV=1	[more]
A0A1S3ATJ5	0.0e+00	96.27	RNA-binding protein NOB1 OS=Cucumis melo OX=3656 GN=LOC103482733 PE=3 SV=1	[more]
A0A5A7TH94	0.0e+00	96.11	RNA-binding protein NOB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1H071	0.0e+00	89.35	RNA-binding protein NOB1-like OS=Cucurbita moschata OX=3662 GN=LOC111459243 PE=3...	[more]
A0A6J1K514	0.0e+00	89.19	RNA-binding protein NOB1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of CsaV3_5G002950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41190.1	2.0e-200	59.29	CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR0...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014881	Nin one binding (NOB1) Zn-ribbon-like	PFAM	PF08772	NOB1_Zn_bind	coord: 466..536 e-value: 8.8E-23 score: 80.3
IPR017117	Ribonuclease Nob1, eukaryote	PIRSF	PIRSF037125	Nob1	coord: 26..617 e-value: 7.0E-130 score: 431.9
IPR036283	NOB1 zinc finger-like superfamily	GENE3D	6.20.210.10		coord: 460..535 e-value: 4.0E-22 score: 79.8
IPR036283	NOB1 zinc finger-like superfamily	SUPERFAMILY	144206	NOB1 zinc finger-like	coord: 466..529
None	No IPR available	GENE3D	3.40.50.1010		coord: 38..153 e-value: 7.7E-27 score: 95.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..253
None	No IPR available	PANTHER	PTHR12814:SF3	SUBFAMILY NOT NAMED	coord: 3..616
IPR033411	Ribonuclease, PIN domain	PFAM	PF17146	PIN_6	coord: 48..134 e-value: 5.4E-25 score: 87.6
IPR033411	Ribonuclease, PIN domain	CDD	cd09876	PIN_Nob1-like	coord: 58..145 e-value: 7.02109E-34 score: 123.006
IPR039907	RNA-binding protein NOB1	PANTHER	PTHR12814	RNA-BINDING PROTEIN NOB1	coord: 3..616

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G002950.1	CsaV3_5G002950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0042274	ribosomal small subunit biogenesis
molecular_function	GO:0004521	endoribonuclease activity