CsaV3_5G002750 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G002750
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 1694611 .. 1695118 (+)
RNA-Seq ExpressionCsaV3_5G002750
SyntenyCsaV3_5G002750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCATCTCCATTTTTTTCTTTTGCTTCTTGTGGATTCAAGCAGACGCAGGTGACCCATTTGCCCCATTTCTCTGTTTTTTGTTATTGCATTATTTGTTCTGCCATTGTAATAGTGCTTTACTTGCCACTAATATTGATTGGAAAAAGTTTGTTCATCTTTCATTTTTCTAGCCCCATCAAACCCACTTTTCTTTTTCTTTCCATAGAAACAAACAGAAACGGTCCCTTGCCTTATCTTGACTTACTGTTCAATGGAGACTTGTGTTGTAGATTATAGTGTCATTTCACCATTAAGATGGCCTACCTCTTTAGTTTTTAAGTGGAGAAATGATATGAAGCCTCTCGAGAAAGCTTCCTCTTTGGTTGCTTGGCCAATGGCCACTATTTGTCTTGGAATTGATGGAAAAAGTTTCACTCATTGCTTAAAATATAGCTTGTTTGCTTTCTTTACTTTCTTTTATTTGCTCAAATACGTGAAGGGGAAAGCAATATCTGAGTTTTGA

mRNA sequence

ATGGGTCCATCTCCATTTTTTTCTTTTGCTTCTTGTGGATTCAAGCAGACGCAGAAACAAACAGAAACGGTCCCTTGCCTTATCTTGACTTACTGTTCAATGGAGACTTGTGTTGTAGATTATAGTGTCATTTCACCATTAAGATGGCCTACCTCTTTAGTTTTTAAGTGGAGAAATGATATGAAGCCTCTCGAGAAAGCTTCCTCTTTGGTTGCTTGGCCAATGGCCACTATTTGTCTTGGAATTGATGGAAAAAGTTTCACTCATTGCTTAAAATATAGCTTGTTTGCTTTCTTTACTTTCTTTTATTTGCTCAAATACGTGAAGGGGAAAGCAATATCTGAGTTTTGA

Coding sequence (CDS)

ATGGGTCCATCTCCATTTTTTTCTTTTGCTTCTTGTGGATTCAAGCAGACGCAGAAACAAACAGAAACGGTCCCTTGCCTTATCTTGACTTACTGTTCAATGGAGACTTGTGTTGTAGATTATAGTGTCATTTCACCATTAAGATGGCCTACCTCTTTAGTTTTTAAGTGGAGAAATGATATGAAGCCTCTCGAGAAAGCTTCCTCTTTGGTTGCTTGGCCAATGGCCACTATTTGTCTTGGAATTGATGGAAAAAGTTTCACTCATTGCTTAAAATATAGCTTGTTTGCTTTCTTTACTTTCTTTTATTTGCTCAAATACGTGAAGGGGAAAGCAATATCTGAGTTTTGA

Protein sequence

MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRNDMKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF*
Homology
[Close]
BLAST of CsaV3_5G002750 vs. NCBI nr
Match: KGN50091.1 (hypothetical protein Csa_000663 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 2.5e-61
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND 60
           MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND
Sbjct: 1   MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND 60

Query: 61  MKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF 117
           MKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF
Sbjct: 61  MKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF 116

[Close]
BLAST of CsaV3_5G002750 vs. ExPASy TrEMBL
Match: A0A0A0KQW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153060 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND 60
           MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND
Sbjct: 1   MGPSPFFSFASCGFKQTQKQTETVPCLILTYCSMETCVVDYSVISPLRWPTSLVFKWRND 60

Query: 61  MKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF 117
           MKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF
Sbjct: 61  MKPLEKASSLVAWPMATICLGIDGKSFTHCLKYSLFAFFTFFYLLKYVKGKAISEF 116

The following BLAST results are available for this feature:
BLAST of CsaV3_5G002750 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50091.12.5e-61100.00hypothetical protein Csa_000663 [Cucumis sativus][more]
BLAST of CsaV3_5G002750 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G002750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQW21.2e-61100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153060 PE=4 SV=1[more]
BLAST of CsaV3_5G002750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G002750.1CsaV3_5G002750.1mRNA