CsaV3_5G002400 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G002400
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	meiotic recombination protein SPO11-2
Location	chr5: 1471911 .. 1475640 (+)
RNA-Seq Expression	CsaV3_5G002400
Synteny	CsaV3_5G002400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGGAGCTCACTTTTAGTGTCACAATTTTTGGATGAAAAACCGTGATTGCTTCACGGTTATTTACCATAGAGATGGTGATCTCTAAGGTGATAGAATGAAACGGGAGAGCCTCGCCAAGGCCAATGCCTTTTGCAACACTCTCCCAACTTTTGTTTGGAGGGAATATAACGATCACTATGGAATGATCGTTATATTTCCAACAACCAACATATATAATCAGCGCCATTTTCACCGGGTTTATGCTCGGTGACCTGCCGTCACAACTTCAACCAACTCCGCCTCTCCGATCCTTCAAACTCCTTCTGTAAGTTCACATCTGCTTTCTCTTGTTGTGTTGTCTTAATTGGAGTTATGATTCTTGGACTTTTGGTATGTACGTTCTTAGTTTATCGGAGTTTGTAGAAGTACAACTGAGTTTCGCATTTTTGGAAATAGTTTTTACATTGAAGCTAGATCATATCAAATTCTCCTCGTTATTGGATATATTACCCATCTTTAAATTGGTCTCATATCCGACACTTCCTGATGGGTGGCCATCCGTTGTTAATTTGCCATGGATTTAGTGAACATGTGAATGGAAGAGCTGCTGTCTGGATCAACTAAAAGGCTTTCGTTAAAAGTGTAACTGCCGTATAATGCAGCTTATTTTTACTAGTGCAGTTGCTAGGTGCAAGAAGTAAAGTAGAACAAGCAAATGAGTTAACTATTTGTCAATGTAATGAATAAGTTGAGATGATGATTTCCTGCAATTCGTCATCCAACCCACAATAGAACCCTTTCCCCGGCAGATTAGGGTAAGCATGAAGCAATTTCTTCATTACTCTGCTGATAAATAAATTTGTTGTTTAAAGCATTTTTTAGAAGAAAAAGGGTTTTGCTTAAATTAGATAGGTAATATGTCCAAAGCATTTTTTATACTAATGTGCAACGTCCTCTTTTAATTTTGTTATTTGTTTAAGAGGCTACAAAAAGAATACAAGAGCAACGAAATTCAAGTTGAATGGAGCCGGCAGGTTTATTCGAATCCTCCATGAGATTTTTCTCTGATCAAGAACTCTGCTATGCTGATATTCTCACTCCTCAAGAGGTATGATGAATTCACTTCATCATCCTTATCTCTAATCTTCGATTAGTGTTCCATTATATCTCAAGCATTGATTTCGAATAGGTCGTGGCTAGAATTCAAGTAGCTGTCCTCAATTTTCTCAGAATTCTCAACTCCTCCTCTCCAGCCATCTCAAATCTTCCTCTGGTATGCTTCCTAACTAAGAAATGAAATGATATACGATAGATGAACAAAATTTGGATGCACTTAGACGGTATTACACGTTAATGATTGGACAGATTGATCGAAGATCGAGCAATAGCCGAGTGAGTCAAGGAATTTTGACAGATGATTCGTGGATATTCCTTTCGCATTCCTTTTGTACGAGGTCTTTGATGAGACCCAACGCCTCTAAGGCTTTTGTCAGAGGTATTGTAAATGGAATCTAATCTTCGATGGTCAGATTTTTTTAATGATCACTTTGTTAGCCTATTTTTTTGTCTACTTTTGAGCTTTCCTTATTTTGTGATGTAGTTTGGAAGCTGATGGAGATGTGCTCTCAGATTCTGATTCAGGATAAGAAAGTGACGCAGAGGGAGCTTTTCTATAAGCTGCTCTGTGATTCACCGGTTTATTTTTCGACTCAGTTGCATGTCAATAGGACAATTCAAGGTGATTTTGTTCAACGAAGACCTGCTTACTAGTTAAGAACTAAAACTATATTAAGCATAATGATCAAAGTGCAGTAGTTTTATTGCAGATGTTGTAGCCTTACTTCAATGTAGCCGTTACAGCCTTGGAATTATGGCATCTAGTAGGGGACTTGTCGCCGGCCGTCTACTGTTGCAGGCACATTGCGCTGTTTTTCTTATCGGTTTGGTTATTTACGTTGCACATCACCACATCACATATATACGCATGAAGTGATAACCCGGCTTTTATTGACCCCTATTATTCTACTTTTGCATCACAACTACGTTGTGAATCCTTGAAATCAGGGTATTGATTTGATTATACATTGTTTATTGGTTTCTGGCCAACATGCACTTTTAAGGTATCTTCTACTAAACCAAATTCTTGGACGTTATGGCCTTCCTGAACAATTTTGATTCCTATAGGAGCCTGAGCAAGAAGTTGTGGACTGCACTGCCTGTGGGTCTTCTGGATATCCCATTTCAGGTGACTTGGACTTGCTGCAGACGTTGACTCTGAAGACTGACGCTCGTTACATAATTGTAATCGAAAAGGTCATTTTTCTTAAATTATGACCTGCTTTTTAATTATACTTTTGTGAAAACAATAATTCAAAAAATGCAGTCTATCATAATGTGTGCAAATGCATCAAACATTATTGGTTATGCAGCATGCGATATTCCAACGTTTGGCAGATGATCGCGTTTTCAATCGCATTCCTAGTATTCTTATCACAGCCAAAGGATATCCAGACTTAGCCACAAGGTAATTTTGTTCAACAGTTCATAAATCGCCATTCCTTTTGTTGCCTTCTTGGAAGTCGTAACTTAAACATATGAACTGCCTTCTCAGGTACTTTCTTCACAAAATTTGCAAAACGTTTTCGCATCTGCCAATGTTCGGCCTTGTTGATTGGTACGAGATCCTCCTTTACATCAACTCAACAAACTTCATAATTTTTTTCTCACTTTTAGCTTCTGGGTTCTAAAGGAACCCTGCGGGATTGGCCATTTTATGCACCTTCAAATACGGAAGTATAGGGATGGGCTTGGAGGCATACAGATATGGTAAGTCGCATTCATTTATTTGTTCGATCTGTTTCTAATTGCAAATCATAAAACTGAATAATCTCTTTACATTACCAGCTTGCAATGTTAAATGGTTGGGAGTACGAGGAGATGATTTACAACTGATACCACAAGAATCTCTGGTTCCACTCAAGCCCCGGGACCTACAAATTGCCAAAAGCTTGCTGTCCTCAAAAATATTACAGGTATCGTGCATAATTCTATACCTTTGATGCTATGGCATTTTAGGCTATCAAAATGCTTAAGAATATATCAAACCAACAGGAGAACTATCGACAAGAGCTGACATTAATGGTTGAGAGAGGGCAAAAGGCTGAACTTGAAGCTTTGTACCACAATGGATTCGATTACTTGGAGAAGTACATAGTCAAAAAGATTATTCAATTTAGTTACATCTGACATTATTTTCAACCTAGAGATGTAGAGGCATCTGCATAGAGTGAATAAAGGGCTATTTGCTAAAAAAACCATACCTTCTTTTTCAAGTCCATCTTTCTTAGAAGAGAAGTTCACAAAAACTGAAGAGACTCGTTCATCAATCAAAGTTTTCAGCTGCTTCAACTTTAAAGATTCCCCCGGTTCCTTTCCCCATGTTGCCATACTACGACGTCACCTGAGTCTCCATTGACATCAAAGGAAGTCTTTCTCCCTTGAAAGCTACTCTTAATATCCAACCCTTGCTGCCCCTAGTTGTGGATTTATCCTATAAAGTTCCAAAGTAGAAAAACTATTAGGTGCTATCTGTGAAAGAAACGGAACAGAAGATGGGAGGTTTTGAACAGCTAGCAAATGATGTAGTTTAAAGTTAAAATTGAAAGATGCATGACTAAAGGGGTTTTTAAGATATGAATGATTTATAATTCCTTTCGATGTGATCAAAGTCAAACGACTTGCTCATTTT

mRNA sequence

ATGGAGCCGGCAGGTTTATTCGAATCCTCCATGAGATTTTTCTCTGATCAAGAACTCTGCTATGCTGATATTCTCACTCCTCAAGAGGTCGTGGCTAGAATTCAAGTAGCTGTCCTCAATTTTCTCAGAATTCTCAACTCCTCCTCTCCAGCCATCTCAAATCTTCCTCTGATTGATCGAAGATCGAGCAATAGCCGAGTGAGTCAAGGAATTTTGACAGATGATTCGTGGATATTCCTTTCGCATTCCTTTTGTACGAGGTCTTTGATGAGACCCAACGCCTCTAAGGCTTTTGTCAGAGTTTGGAAGCTGATGGAGATGTGCTCTCAGATTCTGATTCAGGATAAGAAAGTGACGCAGAGGGAGCTTTTCTATAAGCTGCTCTGTGATTCACCGGTTTATTTTTCGACTCAGTTGCATGTCAATAGGACAATTCAAGATGTTGTAGCCTTACTTCAATGTAGCCGTTACAGCCTTGGAATTATGGCATCTAGTAGGGGACTTGTCGCCGGCCGTCTACTGTTGCAGGAGCCTGAGCAAGAAGTTGTGGACTGCACTGCCTGTGGGTCTTCTGGATATCCCATTTCAGGTGACTTGGACTTGCTGCAGACGTTGACTCTGAAGACTGACGCTCGTTACATAATTGTAATCGAAAAGCATGCGATATTCCAACGTTTGGCAGATGATCGCGTTTTCAATCGCATTCCTAGTATTCTTATCACAGCCAAAGGATATCCAGACTTAGCCACAAGGTACTTTCTTCACAAAATTTGCAAAACGTTTTCGCATCTGCCAATGTTCGGCCTTGTTGATTGGAACCCTGCGGGATTGGCCATTTTATGCACCTTCAAATACGGAAGTATAGGGATGGGCTTGGAGGCATACAGATATGCTTGCAATGTTAAATGGTTGGGAGTACGAGGAGATGATTTACAACTGATACCACAAGAATCTCTGGTTCCACTCAAGCCCCGGGACCTACAAATTGCCAAAAGCTTGCTGTCCTCAAAAATATTACAGGAGAACTATCGACAAGAGCTGACATTAATGGTTGAGAGAGGGCAAAAGGCTGAACTTGAAGCTTTGTACCACAATGGATTCGATTACTTGGAGAAGTACATAGTCAAAAAGATTATTCAATTTAGTTACATCTGA

Coding sequence (CDS)

ATGGAGCCGGCAGGTTTATTCGAATCCTCCATGAGATTTTTCTCTGATCAAGAACTCTGCTATGCTGATATTCTCACTCCTCAAGAGGTCGTGGCTAGAATTCAAGTAGCTGTCCTCAATTTTCTCAGAATTCTCAACTCCTCCTCTCCAGCCATCTCAAATCTTCCTCTGATTGATCGAAGATCGAGCAATAGCCGAGTGAGTCAAGGAATTTTGACAGATGATTCGTGGATATTCCTTTCGCATTCCTTTTGTACGAGGTCTTTGATGAGACCCAACGCCTCTAAGGCTTTTGTCAGAGTTTGGAAGCTGATGGAGATGTGCTCTCAGATTCTGATTCAGGATAAGAAAGTGACGCAGAGGGAGCTTTTCTATAAGCTGCTCTGTGATTCACCGGTTTATTTTTCGACTCAGTTGCATGTCAATAGGACAATTCAAGATGTTGTAGCCTTACTTCAATGTAGCCGTTACAGCCTTGGAATTATGGCATCTAGTAGGGGACTTGTCGCCGGCCGTCTACTGTTGCAGGAGCCTGAGCAAGAAGTTGTGGACTGCACTGCCTGTGGGTCTTCTGGATATCCCATTTCAGGTGACTTGGACTTGCTGCAGACGTTGACTCTGAAGACTGACGCTCGTTACATAATTGTAATCGAAAAGCATGCGATATTCCAACGTTTGGCAGATGATCGCGTTTTCAATCGCATTCCTAGTATTCTTATCACAGCCAAAGGATATCCAGACTTAGCCACAAGGTACTTTCTTCACAAAATTTGCAAAACGTTTTCGCATCTGCCAATGTTCGGCCTTGTTGATTGGAACCCTGCGGGATTGGCCATTTTATGCACCTTCAAATACGGAAGTATAGGGATGGGCTTGGAGGCATACAGATATGCTTGCAATGTTAAATGGTTGGGAGTACGAGGAGATGATTTACAACTGATACCACAAGAATCTCTGGTTCCACTCAAGCCCCGGGACCTACAAATTGCCAAAAGCTTGCTGTCCTCAAAAATATTACAGGAGAACTATCGACAAGAGCTGACATTAATGGTTGAGAGAGGGCAAAAGGCTGAACTTGAAGCTTTGTACCACAATGGATTCGATTACTTGGAGAAGTACATAGTCAAAAAGATTATTCAATTTAGTTACATCTGA

Protein sequence

MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDRRSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELEALYHNGFDYLEKYIVKKIIQFSYI*

Homology

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BLAST of CsaV3_5G002400 vs. NCBI nr
Match: XP_004143970.1 (meiotic recombination protein SPO11-2 [Cucumis sativus] >XP_011654717.1 meiotic recombination protein SPO11-2 [Cucumis sativus] >XP_011654718.1 meiotic recombination protein SPO11-2 [Cucumis sativus] >XP_031741008.1 meiotic recombination protein SPO11-2 [Cucumis sativus] >KGN50057.1 hypothetical protein Csa_000678 [Cucumis sativus])

HSP 1 Score: 764.6 bits (1973), Expect = 4.1e-217
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR
Sbjct: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
           RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ
Sbjct: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180
           RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ
Sbjct: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180

Query: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240
           EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI
Sbjct: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240

Query: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300
           TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN
Sbjct: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300

Query: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360
           VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE
Sbjct: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360

Query: 361 ALYHNGFDYLEKYIVKKIIQFSYI 385
           ALYHNGFDYLEKYIVKKIIQFSYI
Sbjct: 361 ALYHNGFDYLEKYIVKKIIQFSYI 384

[Close]

BLAST of CsaV3_5G002400 vs. NCBI nr
Match: XP_008437337.1 (PREDICTED: meiotic recombination protein SPO11-2 [Cucumis melo] >XP_008437338.1 PREDICTED: meiotic recombination protein SPO11-2 [Cucumis melo] >XP_008437341.1 PREDICTED: meiotic recombination protein SPO11-2 [Cucumis melo] >XP_008437342.1 PREDICTED: meiotic recombination protein SPO11-2 [Cucumis melo])

HSP 1 Score: 748.4 bits (1931), Expect = 3.0e-212
Identity = 375/384 (97.66%), Postives = 379/384 (98.70%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQ+AVLNFLRILNSSSPAISNLPLIDR
Sbjct: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQIAVLNFLRILNSSSPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
           RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDK+VTQ
Sbjct: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKRVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180
           RELFYKLLCDSP YFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ
Sbjct: 121 RELFYKLLCDSPAYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180

Query: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240
           EVVDCTACGSSGYPISGDLDLL+ LTLKTDARYIIVIEKHAIFQRLADDRVFN IPSILI
Sbjct: 181 EVVDCTACGSSGYPISGDLDLLKMLTLKTDARYIIVIEKHAIFQRLADDRVFNHIPSILI 240

Query: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300
           TAKGYPDLATRYFLHKI KTF HLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN
Sbjct: 241 TAKGYPDLATRYFLHKIGKTFPHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300

Query: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360
           VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSL+SSKILQENYRQELTLMVERGQKAELE
Sbjct: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLMSSKILQENYRQELTLMVERGQKAELE 360

Query: 361 ALYHNGFDYLEKYIVKKIIQFSYI 385
           ALYHNGFDYLEKYIVKKIIQFSYI
Sbjct: 361 ALYHNGFDYLEKYIVKKIIQFSYI 384

[Close]

BLAST of CsaV3_5G002400 vs. NCBI nr
Match: KAA0042721.1 (meiotic recombination protein SPO11-2 [Cucumis melo var. makuwa])

HSP 1 Score: 739.6 bits (1908), Expect = 1.4e-209
Identity = 374/394 (94.92%), Postives = 379/394 (96.19%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQ+AVLNFLRILNSSSPAISNLPLIDR
Sbjct: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQIAVLNFLRILNSSSPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
           RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDK+VTQ
Sbjct: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKRVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQ---- 180
           RELFYKLLCDSP YFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQ    
Sbjct: 121 RELFYKLLCDSPAYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQAHCT 180

Query: 181 ------EPEQEVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDR 240
                 EPEQEVVDCTACGSSGYPISGDLDLL+ LTLKTDARYIIVIEKHAIFQRLADDR
Sbjct: 181 AFLIGLEPEQEVVDCTACGSSGYPISGDLDLLKMLTLKTDARYIIVIEKHAIFQRLADDR 240

Query: 241 VFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGM 300
           VFN IPSILITAKGYPDLATRYFLHKI KTF HLPMFGLVDWNPAG+AILCTFKYGSIGM
Sbjct: 241 VFNHIPSILITAKGYPDLATRYFLHKIGKTFPHLPMFGLVDWNPAGMAILCTFKYGSIGM 300

Query: 301 GLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLM 360
           GLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSL+SSKILQENYRQELTLM
Sbjct: 301 GLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLMSSKILQENYRQELTLM 360

Query: 361 VERGQKAELEALYHNGFDYLEKYIVKKIIQFSYI 385
           VERGQKAELEALYHNGFDYLEKYIVKKIIQFSYI
Sbjct: 361 VERGQKAELEALYHNGFDYLEKYIVKKIIQFSYI 394

[Close]

BLAST of CsaV3_5G002400 vs. NCBI nr
Match: XP_038906472.1 (meiotic recombination protein SPO11-2 isoform X1 [Benincasa hispida] >XP_038906473.1 meiotic recombination protein SPO11-2 isoform X1 [Benincasa hispida] >XP_038906474.1 meiotic recombination protein SPO11-2 isoform X1 [Benincasa hispida] >XP_038906475.1 meiotic recombination protein SPO11-2 isoform X1 [Benincasa hispida] >XP_038906476.1 meiotic recombination protein SPO11-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 716.5 bits (1848), Expect = 1.3e-202
Identity = 358/384 (93.23%), Postives = 370/384 (96.35%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           MEP GLF+SSMRFFSDQELCYADILTPQEVVARIQ+AVLNFLRIL SS+PAISNLPLIDR
Sbjct: 1   MEPTGLFKSSMRFFSDQELCYADILTPQEVVARIQIAVLNFLRILTSSTPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
           RSSNSRV+QGILTDD WIFLSHSFCTRSLMR NA+KAFVRVWKLMEMCSQILIQDK+VTQ
Sbjct: 61  RSSNSRVNQGILTDDLWIFLSHSFCTRSLMRSNAAKAFVRVWKLMEMCSQILIQDKRVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180
           RELFYKLLCDSP YF TQLHVNRTIQDVVALLQCSR SLGIMASSRGLVAGRLLLQEPEQ
Sbjct: 121 RELFYKLLCDSPAYFPTQLHVNRTIQDVVALLQCSRCSLGIMASSRGLVAGRLLLQEPEQ 180

Query: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240
           EVVDCTACGSSGY ISGDLDLLQ LTLKTDARYIIVIEKHAIFQRLA+DR+FN IPSILI
Sbjct: 181 EVVDCTACGSSGYAISGDLDLLQKLTLKTDARYIIVIEKHAIFQRLAEDRIFNHIPSILI 240

Query: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300
           TAKGYPDLATR+FLH+I KTF HLP+FGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN
Sbjct: 241 TAKGYPDLATRFFLHRISKTFPHLPIFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300

Query: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360
           VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSL+SSKILQE YRQELTLMVE GQKAELE
Sbjct: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLMSSKILQEKYRQELTLMVEIGQKAELE 360

Query: 361 ALYHNGFDYLEKYIVKKIIQFSYI 385
           ALYHNGFDYLEKYIVKKIIQFSYI
Sbjct: 361 ALYHNGFDYLEKYIVKKIIQFSYI 384

[Close]

BLAST of CsaV3_5G002400 vs. NCBI nr
Match: XP_023533741.1 (meiotic recombination protein SPO11-2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 699.1 bits (1803), Expect = 2.1e-197
Identity = 344/384 (89.58%), Postives = 369/384 (96.09%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           ME  GLF+SSMRFFSDQELCYADILTPQEV+ARIQVAVLNFLRIL+SS+PAISNLPLIDR
Sbjct: 1   METTGLFKSSMRFFSDQELCYADILTPQEVLARIQVAVLNFLRILSSSTPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
            SSNSRV+QGILTD+SWIFLSHSFCTRSLMR NA+KAFVRVWKLMEMCSQIL+Q+K+VTQ
Sbjct: 61  SSSNSRVNQGILTDESWIFLSHSFCTRSLMRANAAKAFVRVWKLMEMCSQILLQEKRVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180
           RELFYKLLCDSP YF TQLHVNRTIQDVVALL+CSR+SLG+MASSRGLVAGRLLLQEPEQ
Sbjct: 121 RELFYKLLCDSPAYFPTQLHVNRTIQDVVALLRCSRFSLGVMASSRGLVAGRLLLQEPEQ 180

Query: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240
           E VDC ACGSSGY ISGDLDLLQ LTLKTDARY+IVIEKHAIFQRLA+DRVFN IPSILI
Sbjct: 181 ETVDCAACGSSGYAISGDLDLLQKLTLKTDARYVIVIEKHAIFQRLAEDRVFNHIPSILI 240

Query: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300
           TAKGYPD+ATRYFLH+I KTF HLP+FGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN
Sbjct: 241 TAKGYPDIATRYFLHRISKTFPHLPIFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300

Query: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360
           VKWLG+RGDD+QLIPQESLV LKPRDLQIAKSL+SS+ILQENYR+ELTLMVE GQKAELE
Sbjct: 301 VKWLGMRGDDVQLIPQESLVSLKPRDLQIAKSLMSSEILQENYREELTLMVEGGQKAELE 360

Query: 361 ALYHNGFDYLEKYIVKKIIQFSYI 385
           ALYHNGFDYLEKY+VKKIIQF+YI
Sbjct: 361 ALYHNGFDYLEKYLVKKIIQFNYI 384

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy Swiss-Prot
Match: Q9M4A1 (Meiotic recombination protein SPO11-2 OS=Arabidopsis thaliana OX=3702 GN=SPO11-2 PE=1 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 4.1e-156
Identity = 273/383 (71.28%), Postives = 326/383 (85.12%), Query Frame = 0


Query: 2   EPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDRR 61
           E +GL  SSM+FFSDQ L YADIL P E  ARI+V+VLN LRILNS  PAIS+L LI+R+
Sbjct: 3   ESSGL--SSMKFFSDQHLSYADILLPHEARARIEVSVLNLLRILNSPDPAISDLSLINRK 62

Query: 62  SSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQR 121
            SNS +++GILTD S+IFLS SF   SL     +KAFVRVWK+ME+C QIL+Q+K+VTQR
Sbjct: 63  RSNSCINKGILTDVSYIFLSTSFTKSSLTNAKTAKAFVRVWKVMEICFQILLQEKRVTQR 122

Query: 122 ELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQE 181
           ELFYKLLCDSP YFS+Q+ VNR++QDVVALL+CSRYSLGIMASSRGLVAGRL LQEP +E
Sbjct: 123 ELFYKLLCDSPDYFSSQIEVNRSVQDVVALLRCSRYSLGIMASSRGLVAGRLFLQEPGKE 182

Query: 182 VVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILIT 241
            VDC+ACGSSG+ I+GDL+LL    ++TDARYII++EKHAIF RL +DRVFN IP + IT
Sbjct: 183 AVDCSACGSSGFAITGDLNLLDNTIMRTDARYIIIVEKHAIFHRLVEDRVFNHIPCVFIT 242

Query: 242 AKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACNV 301
           AKGYPD+ATR+FLH++  TF  LP+  LVDWNPAGLAILCTFK+GSIGMGLEAYRYACNV
Sbjct: 243 AKGYPDIATRFFLHRMSTTFPDLPILVLVDWNPAGLAILCTFKFGSIGMGLEAYRYACNV 302

Query: 302 KWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELEA 361
           KW+G+RGDDL LIP+ESLVPLKP+D QIAKSLLSSKILQENY +EL+LMV+ G++AE+EA
Sbjct: 303 KWIGLRGDDLNLIPEESLVPLKPKDSQIAKSLLSSKILQENYIEELSLMVQTGKRAEIEA 362

Query: 362 LYHNGFDYLEKYIVKKIIQFSYI 385
           LY +G++YL KYI  KI+Q  YI
Sbjct: 363 LYCHGYNYLGKYIATKIVQGKYI 383

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy Swiss-Prot
Match: Q5ZPI9 (Meiotic recombination protein SPO11-2 OS=Oryza sativa subsp. indica OX=39946 GN=SPO11-2 PE=1 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.1e-135
Identity = 244/386 (63.21%), Postives = 311/386 (80.57%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRIL-NSSSPAISNLPLID 60
           M  AG+  +S+ F +D+ LC ADIL P EV ARI+VAVLNFL  L + ++PAIS LPLI 
Sbjct: 1   MAEAGVAAASL-FGADRRLCSADILPPAEVRARIEVAVLNFLAALTDPAAPAISALPLIS 60

Query: 61  RRSSNSRVSQGILTDD-SWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKV 120
           R ++N  + + +L DD S ++LS++ C RSL R N +KAFVRVWK+MEMC +IL + K V
Sbjct: 61  RGAANRGLRRALLRDDVSSVYLSYASCKRSLTRANDAKAFVRVWKVMEMCYKILGEGKLV 120

Query: 121 TQRELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEP 180
           T RELFY LL +SP YF+ Q HVN+T+QDVV+LL+C+R SLGIMASSRG + GRL+LQ P
Sbjct: 121 TLRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIMASSRGALIGRLVLQGP 180

Query: 181 EQEVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSI 240
           E+E VDC+  G SG+ I+GDL++L  L   +DARYIIV+EK AIFQRLA+DR+++ +P I
Sbjct: 181 EEEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEKDAIFQRLAEDRIYSHLPCI 240

Query: 241 LITAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYA 300
           LITAKGYPDLATR+ LH++ +T+ ++P+F LVDWNPAGLAILCT+KYGSI MGLE+YRYA
Sbjct: 241 LITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAILCTYKYGSISMGLESYRYA 300

Query: 301 CNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAE 360
           CNVKWLG+RGDDLQLIPQ +   LKPRDLQIAKSLLSSK LQ+ +R ELTLM+E G++AE
Sbjct: 301 CNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKFLQDKHRAELTLMLETGKRAE 360

Query: 361 LEALYHNGFDYLEKYIVKKIIQFSYI 385
           +EALY +GFD+L KY+ +KI+Q  YI
Sbjct: 361 IEALYSHGFDFLGKYVARKIVQGDYI 385

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy Swiss-Prot
Match: Q6ZD95 (Meiotic recombination protein SPO11-2 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-2 PE=2 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.4e-135
Identity = 243/386 (62.95%), Postives = 311/386 (80.57%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRIL-NSSSPAISNLPLID 60
           M  AG+  +S+ F +D+ LC ADIL P EV ARI+VAVLNFL  L + ++PAIS LPLI 
Sbjct: 1   MAEAGVAAASL-FGADRRLCSADILPPAEVRARIEVAVLNFLAALTDPAAPAISALPLIS 60

Query: 61  RRSSNSRVSQGILTDD-SWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKV 120
           R ++N  + + +L DD S ++LS++ C RSL R N +KAFVRVWK+MEMC +IL + K V
Sbjct: 61  RGAANRGLRRALLRDDVSSVYLSYASCKRSLTRANDAKAFVRVWKVMEMCYKILGEGKLV 120

Query: 121 TQRELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEP 180
           T RELFY LL +SP YF+ Q HVN+T+QDVV+LL+C+R SLGIMASSRG + GRL++Q P
Sbjct: 121 TLRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIMASSRGALIGRLVVQGP 180

Query: 181 EQEVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSI 240
           E+E VDC+  G SG+ I+GDL++L  L   +DARYIIV+EK AIFQRLA+DR+++ +P I
Sbjct: 181 EEEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEKDAIFQRLAEDRIYSHLPCI 240

Query: 241 LITAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYA 300
           LITAKGYPDLATR+ LH++ +T+ ++P+F LVDWNPAGLAILCT+KYGSI MGLE+YRYA
Sbjct: 241 LITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAILCTYKYGSISMGLESYRYA 300

Query: 301 CNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAE 360
           CNVKWLG+RGDDLQLIPQ +   LKPRDLQIAKSLLSSK LQ+ +R ELTLM+E G++AE
Sbjct: 301 CNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKFLQDKHRAELTLMLETGKRAE 360

Query: 361 LEALYHNGFDYLEKYIVKKIIQFSYI 385
           +EALY +GFD+L KY+ +KI+Q  YI
Sbjct: 361 IEALYSHGFDFLGKYVARKIVQGDYI 385

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy Swiss-Prot
Match: Q9Y5K1 (Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-45
Identity = 122/368 (33.15%), Postives = 209/368 (56.79%), Query Frame = 0


Query: 24  ILTPQEVVARIQVAVLNFLRIL-NSSSPAISNLPLIDRRSSNSRVSQGILTDDSWIFLSH 83
           + +  EV+A I+  + + +  L  + +PA +    ID RSS     + I  +DS      
Sbjct: 41  LASSSEVLASIENIIQDIITSLARNEAPAFT----IDNRSS----WENIKFEDSVGLQMV 100

Query: 84  SFCTRSLMR---PNASKAFVRVWKLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQL 143
           S CT   ++   P +++ F  + K++ M  +++  +   T+R+++Y    DS + F  Q 
Sbjct: 101 SHCTTRKIKSDSPKSAQKFSLILKILSMIYKLVQSNTYATKRDIYY---TDSQL-FGNQT 160

Query: 144 HVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDL 203
            V+  I D+  +L+ SR SL I+++S+GL+AG L   E +   V+CT CG++   +  ++
Sbjct: 161 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 220

Query: 204 DLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRI-PSILITAKGYPDLATRYFLHKIC 263
             ++ L   TDA++++++EK A FQRL DD   N++ P I+IT KG PDL TR  + K+ 
Sbjct: 221 QGIRNLV--TDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 280

Query: 264 KTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYAC-NVKWLGVRGDDLQL--IP 323
            TF H+P+F LVD +P G+ I+C +KYGS+ M  EA+      ++WLG+   DL+   +P
Sbjct: 281 DTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 340

Query: 324 QESLVPLKPRDLQIAKSLLSSKIL--QENYRQELTLMVERGQKAELEALYHNGFDYLEKY 382
           ++SL+PL  RD     S+L    +  Q  +R+E+ +M +   KAE++AL     DYL + 
Sbjct: 341 KDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 392

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy Swiss-Prot
Match: Q9LZ03 (DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-45
Identity = 110/308 (35.71%), Postives = 182/308 (59.09%), Query Frame = 0


Query: 87  RSLMRPNASKAFVR----VWKLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQLHVN 146
           +S +RP AS + VR      +++ +  Q+ +++  VT+R+LFY         F  Q   +
Sbjct: 128 KSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFY----TDVKLFQDQTQSD 187

Query: 147 RTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLL 206
             + DV  +L C+R SL ++A+ +G+V GRL+  +   +++DCT  G  G  I  ++D  
Sbjct: 188 AVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNID-- 247

Query: 207 QTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFS 266
           +   +++DA +I+++EK A + RLA+DR +NR P I++TAKG PD+ATR FL K+ K   
Sbjct: 248 RVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM-KMEL 307

Query: 267 HLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYAC-NVKWLGVRGDDLQ--LIPQESL 326
            LP+  LVD +P GL IL  +  GS  M  ++      ++KWLG+R  DL    IP++  
Sbjct: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367

Query: 327 VPLKPRDLQIAKSLLSSKILQEN--YRQELTLMVERGQKAELEALYHNGFDYL-EKYIVK 385
           +P+  +D++  K +L    +++N  + +EL LMV+  QKAE++AL   GF YL E Y+  
Sbjct: 368 LPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy TrEMBL
Match: A0A0A0KNU2 (TP6A_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152220 PE=3 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 2.0e-217
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR
Sbjct: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
           RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ
Sbjct: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180
           RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ
Sbjct: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180

Query: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240
           EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI
Sbjct: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240

Query: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300
           TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN
Sbjct: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300

Query: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360
           VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE
Sbjct: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360

Query: 361 ALYHNGFDYLEKYIVKKIIQFSYI 385
           ALYHNGFDYLEKYIVKKIIQFSYI
Sbjct: 361 ALYHNGFDYLEKYIVKKIIQFSYI 384

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy TrEMBL
Match: A0A1S3AUC6 (meiotic recombination protein SPO11-2 OS=Cucumis melo OX=3656 GN=LOC103482788 PE=3 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.5e-212
Identity = 375/384 (97.66%), Postives = 379/384 (98.70%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQ+AVLNFLRILNSSSPAISNLPLIDR
Sbjct: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQIAVLNFLRILNSSSPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
           RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDK+VTQ
Sbjct: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKRVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180
           RELFYKLLCDSP YFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ
Sbjct: 121 RELFYKLLCDSPAYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180

Query: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240
           EVVDCTACGSSGYPISGDLDLL+ LTLKTDARYIIVIEKHAIFQRLADDRVFN IPSILI
Sbjct: 181 EVVDCTACGSSGYPISGDLDLLKMLTLKTDARYIIVIEKHAIFQRLADDRVFNHIPSILI 240

Query: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300
           TAKGYPDLATRYFLHKI KTF HLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN
Sbjct: 241 TAKGYPDLATRYFLHKIGKTFPHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300

Query: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360
           VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSL+SSKILQENYRQELTLMVERGQKAELE
Sbjct: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLMSSKILQENYRQELTLMVERGQKAELE 360

Query: 361 ALYHNGFDYLEKYIVKKIIQFSYI 385
           ALYHNGFDYLEKYIVKKIIQFSYI
Sbjct: 361 ALYHNGFDYLEKYIVKKIIQFSYI 384

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy TrEMBL
Match: A0A5A7TMD5 (Meiotic recombination protein SPO11-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002190 PE=3 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 6.8e-210
Identity = 374/394 (94.92%), Postives = 379/394 (96.19%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQ+AVLNFLRILNSSSPAISNLPLIDR
Sbjct: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQIAVLNFLRILNSSSPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
           RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDK+VTQ
Sbjct: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKRVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQ---- 180
           RELFYKLLCDSP YFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQ    
Sbjct: 121 RELFYKLLCDSPAYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQAHCT 180

Query: 181 ------EPEQEVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDR 240
                 EPEQEVVDCTACGSSGYPISGDLDLL+ LTLKTDARYIIVIEKHAIFQRLADDR
Sbjct: 181 AFLIGLEPEQEVVDCTACGSSGYPISGDLDLLKMLTLKTDARYIIVIEKHAIFQRLADDR 240

Query: 241 VFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGM 300
           VFN IPSILITAKGYPDLATRYFLHKI KTF HLPMFGLVDWNPAG+AILCTFKYGSIGM
Sbjct: 241 VFNHIPSILITAKGYPDLATRYFLHKIGKTFPHLPMFGLVDWNPAGMAILCTFKYGSIGM 300

Query: 301 GLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLM 360
           GLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSL+SSKILQENYRQELTLM
Sbjct: 301 GLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLMSSKILQENYRQELTLM 360

Query: 361 VERGQKAELEALYHNGFDYLEKYIVKKIIQFSYI 385
           VERGQKAELEALYHNGFDYLEKYIVKKIIQFSYI
Sbjct: 361 VERGQKAELEALYHNGFDYLEKYIVKKIIQFSYI 394

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy TrEMBL
Match: A0A6J1H3X3 (meiotic recombination protein SPO11-2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459771 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.6e-197
Identity = 342/384 (89.06%), Postives = 368/384 (95.83%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           ME  GLF+SSMRFFSDQELCYADILTPQEV+ARIQVAVLNFLRIL+SS+PAISNLPLIDR
Sbjct: 1   METTGLFKSSMRFFSDQELCYADILTPQEVLARIQVAVLNFLRILSSSTPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
            SSNSRV+QGILTD+SWIFLSHSFCTRSLMR NA+KAFVRVWKLMEMCSQIL+Q+K+VTQ
Sbjct: 61  SSSNSRVNQGILTDESWIFLSHSFCTRSLMRANAAKAFVRVWKLMEMCSQILLQEKRVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180
           RELFYKL CDSP YF TQLHVNRTIQDVVALL+CSR+SLG+MASSRGLVAGRLLLQEPEQ
Sbjct: 121 RELFYKLFCDSPAYFPTQLHVNRTIQDVVALLRCSRFSLGVMASSRGLVAGRLLLQEPEQ 180

Query: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240
           E VDC ACG+SGY ISGDLDLLQ LTLKTDARY+IVIEKHAIFQRLA+DRVFN IPSILI
Sbjct: 181 ETVDCAACGTSGYAISGDLDLLQKLTLKTDARYVIVIEKHAIFQRLAEDRVFNHIPSILI 240

Query: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300
           TAKGYPD+ATRYFLH+I KTF HLP+FGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN
Sbjct: 241 TAKGYPDMATRYFLHRISKTFPHLPIFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300

Query: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360
           VKWLG+RGDD+QLIPQESLV LKPRDLQIAKSL+SS+ILQENYR+ELTLMVE GQKAELE
Sbjct: 301 VKWLGMRGDDVQLIPQESLVSLKPRDLQIAKSLMSSEILQENYREELTLMVEGGQKAELE 360

Query: 361 ALYHNGFDYLEKYIVKKIIQFSYI 385
           ALYHNGFDYLEKY+VKKIIQF+YI
Sbjct: 361 ALYHNGFDYLEKYLVKKIIQFNYI 384

[Close]

BLAST of CsaV3_5G002400 vs. ExPASy TrEMBL
Match: A0A6J1K4Y3 (meiotic recombination protein SPO11-2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491232 PE=3 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 1.0e-194
Identity = 339/384 (88.28%), Postives = 365/384 (95.05%), Query Frame = 0


Query: 1   MEPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDR 60
           ME  GLF+SSMRFFSDQELCYADILTPQE +ARIQVAVLNFLRIL+SS+PAISNLPLIDR
Sbjct: 1   METTGLFKSSMRFFSDQELCYADILTPQEALARIQVAVLNFLRILSSSTPAISNLPLIDR 60

Query: 61  RSSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQ 120
            S+NSRV+QGILTD+SWIFLSHSF TRSLMR NA+KAFVRVWKLMEMCSQIL+Q+K+VTQ
Sbjct: 61  SSNNSRVNQGILTDESWIFLSHSFSTRSLMRANAAKAFVRVWKLMEMCSQILLQEKRVTQ 120

Query: 121 RELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQ 180
           RELFYKLLCDSP YF TQLHVNRTIQDVV LL+CSR+SLG+MASSRGLVAGRLLLQEPEQ
Sbjct: 121 RELFYKLLCDSPAYFPTQLHVNRTIQDVVTLLRCSRFSLGVMASSRGLVAGRLLLQEPEQ 180

Query: 181 EVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILI 240
           E VDC ACGSSGY ISGDLDLLQ LTLKTDARY+IVIEKHAIFQRL +DRVFN IPSILI
Sbjct: 181 ETVDCAACGSSGYAISGDLDLLQKLTLKTDARYVIVIEKHAIFQRLVEDRVFNHIPSILI 240

Query: 241 TAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300
           TAKGYPD+ATRYFLH+I KTF HLP+FGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN
Sbjct: 241 TAKGYPDIATRYFLHRISKTFPHLPIFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACN 300

Query: 301 VKWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELE 360
           VKWLG+RGDD+QLIPQESLV LKPRDLQIAKSL+SS+ILQENYR+ELTLMVE GQKAELE
Sbjct: 301 VKWLGMRGDDVQLIPQESLVSLKPRDLQIAKSLMSSEILQENYREELTLMVEGGQKAELE 360

Query: 361 ALYHNGFDYLEKYIVKKIIQFSYI 385
           ALYHNGFDYL+KYIVKKIIQF+YI
Sbjct: 361 ALYHNGFDYLQKYIVKKIIQFNYI 384

[Close]

BLAST of CsaV3_5G002400 vs. TAIR 10
Match: AT1G63990.1 (sporulation 11-2 )

HSP 1 Score: 552.4 bits (1422), Expect = 2.9e-157
Identity = 273/383 (71.28%), Postives = 326/383 (85.12%), Query Frame = 0


Query: 2   EPAGLFESSMRFFSDQELCYADILTPQEVVARIQVAVLNFLRILNSSSPAISNLPLIDRR 61
           E +GL  SSM+FFSDQ L YADIL P E  ARI+V+VLN LRILNS  PAIS+L LI+R+
Sbjct: 3   ESSGL--SSMKFFSDQHLSYADILLPHEARARIEVSVLNLLRILNSPDPAISDLSLINRK 62

Query: 62  SSNSRVSQGILTDDSWIFLSHSFCTRSLMRPNASKAFVRVWKLMEMCSQILIQDKKVTQR 121
            SNS +++GILTD S+IFLS SF   SL     +KAFVRVWK+ME+C QIL+Q+K+VTQR
Sbjct: 63  RSNSCINKGILTDVSYIFLSTSFTKSSLTNAKTAKAFVRVWKVMEICFQILLQEKRVTQR 122

Query: 122 ELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQE 181
           ELFYKLLCDSP YFS+Q+ VNR++QDVVALL+CSRYSLGIMASSRGLVAGRL LQEP +E
Sbjct: 123 ELFYKLLCDSPDYFSSQIEVNRSVQDVVALLRCSRYSLGIMASSRGLVAGRLFLQEPGKE 182

Query: 182 VVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILIT 241
            VDC+ACGSSG+ I+GDL+LL    ++TDARYII++EKHAIF RL +DRVFN IP + IT
Sbjct: 183 AVDCSACGSSGFAITGDLNLLDNTIMRTDARYIIIVEKHAIFHRLVEDRVFNHIPCVFIT 242

Query: 242 AKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYACNV 301
           AKGYPD+ATR+FLH++  TF  LP+  LVDWNPAGLAILCTFK+GSIGMGLEAYRYACNV
Sbjct: 243 AKGYPDIATRFFLHRMSTTFPDLPILVLVDWNPAGLAILCTFKFGSIGMGLEAYRYACNV 302

Query: 302 KWLGVRGDDLQLIPQESLVPLKPRDLQIAKSLLSSKILQENYRQELTLMVERGQKAELEA 361
           KW+G+RGDDL LIP+ESLVPLKP+D QIAKSLLSSKILQENY +EL+LMV+ G++AE+EA
Sbjct: 303 KWIGLRGDDLNLIPEESLVPLKPKDSQIAKSLLSSKILQENYIEELSLMVQTGKRAEIEA 362

Query: 362 LYHNGFDYLEKYIVKKIIQFSYI 385
           LY +G++YL KYI  KI+Q  YI
Sbjct: 363 LYCHGYNYLGKYIATKIVQGKYI 383

[Close]

BLAST of CsaV3_5G002400 vs. TAIR 10
Match: AT5G02820.1 (Spo11/DNA topoisomerase VI, subunit A protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-46
Identity = 110/308 (35.71%), Postives = 182/308 (59.09%), Query Frame = 0


Query: 87  RSLMRPNASKAFVR----VWKLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQLHVN 146
           +S +RP AS + VR      +++ +  Q+ +++  VT+R+LFY         F  Q   +
Sbjct: 128 KSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFY----TDVKLFQDQTQSD 187

Query: 147 RTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLL 206
             + DV  +L C+R SL ++A+ +G+V GRL+  +   +++DCT  G  G  I  ++D  
Sbjct: 188 AVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNID-- 247

Query: 207 QTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFS 266
           +   +++DA +I+++EK A + RLA+DR +NR P I++TAKG PD+ATR FL K+ K   
Sbjct: 248 RVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM-KMEL 307

Query: 267 HLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYAC-NVKWLGVRGDDLQ--LIPQESL 326
            LP+  LVD +P GL IL  +  GS  M  ++      ++KWLG+R  DL    IP++  
Sbjct: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367

Query: 327 VPLKPRDLQIAKSLLSSKILQEN--YRQELTLMVERGQKAELEALYHNGFDYL-EKYIVK 385
           +P+  +D++  K +L    +++N  + +EL LMV+  QKAE++AL   GF YL E Y+  
Sbjct: 368 LPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427

[Close]

BLAST of CsaV3_5G002400 vs. TAIR 10
Match: AT3G13170.1 (Spo11/DNA topoisomerase VI, subunit A protein )

HSP 1 Score: 150.2 bits (378), Expect = 3.4e-36
Identity = 97/284 (34.15%), Postives = 165/284 (58.10%), Query Frame = 0


Query: 103 KLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQLHVNRTIQDVVALLQCSRYSLGIM 162
           +++ +  Q+L +++  ++R+++Y      P  F  Q  V+R I D+  L QCSRY+L ++
Sbjct: 81  RVLLIVQQLLQENRHASKRDIYYM----HPSAFKAQSIVDRAIGDICILFQCSRYNLNVV 140

Query: 163 ASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLLQTLTLKTDARYIIVIEKHAI 222
           +   GLV G L  +E  ++  DC    ++ YP+   ++ ++ +   + A YI+V+EK  +
Sbjct: 141 SVGNGLVMGWLKFREAGRK-FDCLNSLNTAYPVPVLVEEVEDIV--SLAEYILVVEKETV 200

Query: 223 FQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGLVDWNPAGLAILCT 282
           FQRLA+D        I+IT +GYPD++TR FL  + +   HLP+  LVD +P G  IL T
Sbjct: 201 FQRLANDMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKL-HLPVHCLVDCDPYGFEILAT 260

Query: 283 FKYGSIGMG--LEAYRYACNVKWLGVRGDDLQL--IPQESLVPLKPRDLQIAKSLLSSKI 342
           +++GS+ M   +E+ R A ++KWLG    D ++  +P++ L+PL   D +  +++L    
Sbjct: 261 YRFGSMQMAYDIESLR-APDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCY 320

Query: 343 LQE---NYRQELTLMVERGQKAELEALYHNGFDYL-EKYIVKKI 379
           L+     +R EL  M++RG K E+EAL  +   +L E YI  KI
Sbjct: 321 LKREMPQWRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKI 355

The following BLAST results are available for this feature:

BLAST of CsaV3_5G002400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143970.1	4.1e-217	100.00	meiotic recombination protein SPO11-2 [Cucumis sativus] >XP_011654717.1 meiotic ...	[more]
XP_008437337.1	3.0e-212	97.66	PREDICTED: meiotic recombination protein SPO11-2 [Cucumis melo] >XP_008437338.1 ...	[more]
KAA0042721.1	1.4e-209	94.92	meiotic recombination protein SPO11-2 [Cucumis melo var. makuwa]	[more]
XP_038906472.1	1.3e-202	93.23	meiotic recombination protein SPO11-2 isoform X1 [Benincasa hispida] >XP_0389064...	[more]
XP_023533741.1	2.1e-197	89.58	meiotic recombination protein SPO11-2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G002400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M4A1	4.1e-156	71.28	Meiotic recombination protein SPO11-2 OS=Arabidopsis thaliana OX=3702 GN=SPO11-2...	[more]
Q5ZPI9	1.1e-135	63.21	Meiotic recombination protein SPO11-2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q6ZD95	2.4e-135	62.95	Meiotic recombination protein SPO11-2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9Y5K1	2.3e-45	33.15	Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1	[more]
Q9LZ03	3.9e-45	35.71	DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1	[more]

BLAST of CsaV3_5G002400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNU2	2.0e-217	100.00	TP6A_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152220 PE=3...	[more]
A0A1S3AUC6	1.5e-212	97.66	meiotic recombination protein SPO11-2 OS=Cucumis melo OX=3656 GN=LOC103482788 PE...	[more]
A0A5A7TMD5	6.8e-210	94.92	Meiotic recombination protein SPO11-2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1H3X3	6.6e-197	89.06	meiotic recombination protein SPO11-2 isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1K4Y3	1.0e-194	88.28	meiotic recombination protein SPO11-2 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CsaV3_5G002400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63990.1	2.9e-157	71.28	sporulation 11-2	[more]
AT5G02820.1	2.7e-46	35.71	Spo11/DNA topoisomerase VI, subunit A protein	[more]
AT3G13170.1	3.4e-36	34.15	Spo11/DNA topoisomerase VI, subunit A protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002815	Spo11/DNA topoisomerase VI subunit A	PRINTS	PR01550	TOP6AFAMILY	coord: 214..231 score: 44.44 coord: 238..259 score: 45.74 coord: 138..155 score: 27.78 coord: 271..287 score: 48.53 coord: 156..171 score: 45.31
IPR002815	Spo11/DNA topoisomerase VI subunit A	PANTHER	PTHR10848	MEIOTIC RECOMBINATION PROTEIN SPO11	coord: 16..383
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 18..164 e-value: 3.8E-21 score: 77.4
None	No IPR available	GENE3D	3.40.1360.10		coord: 165..384 e-value: 4.4E-66 score: 224.6
None	No IPR available	PANTHER	PTHR10848:SF0	MEIOTIC RECOMBINATION PROTEIN SPO11	coord: 16..383
IPR013049	Spo11/DNA topoisomerase VI, subunit A, N-terminal	PFAM	PF04406	TP6A_N	coord: 96..161 e-value: 1.8E-15 score: 56.7
IPR034136	Topoisomerase 6 subunit A/Spo11, TOPRIM domain	CDD	cd00223	TOPRIM_TopoIIB_SPO	coord: 212..369 e-value: 4.18652E-60 score: 189.773
IPR036078	Spo11/DNA topoisomerase VI subunit A superfamily	SUPERFAMILY	56726	DNA topoisomerase IV, alpha subunit	coord: 96..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G002400.1	CsaV3_5G002400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0042138	meiotic DNA double-strand break formation
cellular_component	GO:0005694	chromosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity