CsaV3_5G002080 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G002080
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pectin lyase-like superfamily protein
Location	chr5: 1260119 .. 1263969 (+)
RNA-Seq Expression	CsaV3_5G002080
Synteny	CsaV3_5G002080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCATGTCCTCATTTTTGCATATATTCTACCTTCGTTGGTTTTTTCTTCCATATCTTTTCTTAGATTTTTATTTTTAAAATCGTGGGTAGAATGTAGATAACATCTGAACAAAGTTGATTTTTTAATTTGGAAGAAGATAATGAAGCATCCAACCATAACTTCAACCCATATATCATATAATAAAATTTCTTCCTCTCAAAACGCAAAGTGGGGGCCAGAGCGCTAAAATCAAAAGCATTTCTTTTCCTTACAAACAAACTTAATCACACACTTAAAGCCTCCTTACTCATTCTTCTCTTTCTTCCTCCCCATTTTCTTCCATTAATTACTTAAATCTTTTCTCCATTTCCACTTCCTTCTTGGATCTTTCTCCTTGTTTTCACTCTCAGATCTACTCCCATCCTTCTTCTTCTTTAAATCCTTACTTAATTCCCCCTAAAAAGCTTCTCTCAACTCCTTTCTCCTTGTTTTCTTTCCCATTTCTTCACAATGCTCCCCTTTCCCCTCTTCATTTTCATCTTCTTCACTACCCTTTTCCCCTCTCCTCTCGCCGTCGCCGACCTCACTACCTGCTCCGGTATAGTCCCCATGAAGTACAGGAACGACAAGATTTCCATTGCCGACTTTGGTGGAATCGGCGATGGTCGAACATTGAATACCAGAGCCTTTCGAGCTGCCATTTATCGGATTCAGCATTTGAGGAGACGAGGGGGTACTTTGCTTTACATTCCTCCGGGGGTTTACTTGACCGAGACCTTCAATCTCACTAGCCATATGACTCTCTATCTTGCTAAAGGCGCTGTTATCAAAGCTGTTCAGGTATTTACATCTCTCTCAAGTCTCAACTCAACCGAACTTCATCCTTCTTTTCCTAGTTTGTGATTTGTGTGGTTGTTCATGTTTAGGGTCTTTGTTTGTGTGTTTTTTTAATCGTCAATTCTGACATTGAGCTTGTTTTTGTTGGAGATTGGTATGAAATCCAGAAACAAATAAAACAGAAAATGTAAACGGGAGAGAATCGACACAGAGGTTACATGGTTGACTAACAGTGTAGCTAGGTTCATGGCAGTGAGAGAACAATTCTCAATTTATTATTATTAGAGTGAAAATCTTATATTACAGATTTAGGAGGACCAGTAGTGTTATAAAATTTCTATATTGCACTCTTCTTTAACTTCAGAACCTGAGTCGTAAATAACATAAATAATGTGGAATAACAAATTCAAAACATTCATAATGATAATGGTTTCTAAATTAGAGGATTGGGATTTATGAGAATGAATGTGGGTCCTGAATGGAAATTGCAAGAAGTGGTGGGTGGGTCTTTGATTTAAGCTGTGGCATGTGCATCCACTCTAAATTAATACTATGATATATGATTGGACCCTTGACAGGCTGTTCTTTGTCAGCCTCTGATGCTAACTTTTAATTAGAATATGATCCCATTTTAGTTGATTGGTCAATTCACAGCTCAAAATTGCTAATTTGTGATTGTTATTCTACTGATCTGGACATCAATTTCATGCAAACAAAATTGGTTGTCAGTTAGTTCATGTTCAAATATCTAATGTGTAAACTATGTCAAAAAATTGGTAGGCCTTAAATTACAATGATAATGACAACGTTGTTAACGAGTGATAGTAATTAGTCTTAAATTTGCTAGGATACCCCATAACGTGAAAACTCAAGAAGCACACAGATAGTTATTCGTTGCAATATCAAGAGAAGTTACGATATACCATAGCCTTTCTAGAGGCCTATCTTAGTCTCTCCAAGTCCCACAATGGAAGCTTTCACCAAAAATAGTCTCCTAAGGCCCCTATCTCCCTTTGTTTAAGATCAAGTCTCTCCTGGCTAACCTATTTACTACACTCACAACATCATGTTTATTTCTGCTAGCAGAAAGAAAAAAGGGGGTCTAGTTTATGCTTTTTGATCTTTTTGAAATTAGAACGTCTCTACTATCCTTCCTATGAAGTGATTTGCTGATGATCATGAGACTTGTCCGACATCTGTAAATTTTCTAATATGCTAAATAGCTGAAGATTCTTTCACTTTACTTGCATCATGCAAATTTCTTTAGTAAGCTTGTGGTTTTCGATTGATTGTCCAGGATTCTTCAAATTGGCCAGTAATAGCTCCGTTGCCATCTTATGGAAGAGGGAGAGAGCGCCCTGGAGGAAGATATATAAGCCTTATCCATGGAGATGGTGTTCATGATGTGGTGATCACTGGTATGAATCATCAAGTTCTTTTAAATATGAAAGATATCACAACCTTGGGTTACCTGTGCTGTTTTTGGAAAAGTTATGGATATTGATAGCCTGAGTAAAATTGTTATCTTAGGTGAGAATGGGACTATTGATGGCCAAGGTGATGCCTGGTGGAATATGTGGAGGACAGGAACTCTGAAGTACACTAGGCCTAGTCTTGTTGAATTTGTCAATTCATACAATATCATCATATCCAATGTAATGTTCCTGAATTCTCCGTTTTGGAACATTCACCCTGTTTACTGCCGGTAAGAATTGAAGTCTTATCATCAATCTTGTTACAGCTCCATATAATTGCTCCAAGCTCCGTTGTATAGTTCTATCATACATTTTTATCTTCTATTGCAGGAATGTTGTTGTCAGATATGTCACAATATTGGCTCCTCGTGATTCCCCTAACACCGATGGAGTTGATCCAGGTGCACTTTCGGATTCTTTGGTGCTTCATTGTTCTGATTACAAGAGCTAAACAAACTTGTTAAAACAAGTGCTTATTGTAAATCATGTTCAAAATTCTCATTATATTAGCTTTGTATATCCTTAAAAGTAACAAAACTTGCAAACTGATGCTCCACAGATTCAAGCAATAACGTTTGCATAGAAGATTCCTACATTTCAACTGGAGATGATCTTGTAGCTGTGAAGAGTGGGTGGGATGAATACGGTATTGCTTATGGTCGCTGTAGTTACGACATTACCATCCGAAGAATTTCGGGGTCTAGTCCATTTGCTGGAGTTGCAGTTGGAAGTGAAGCCTCTGGTGGAGTGGCAAATGTATTGGCAGAACACCTGAACTTTTACGATATGGGAGTTGGTATCAACATCAAGACAAACATCGGAAGGGGAGGGTTCATAAAGAACATAACTGTGTCCAATGTCTACATGGAGAATTCAAGAAAGGGTCTAAAGATTGCTGGCGATGCCGGAGATCATCCCGACGACAAGTTCGACCCAAATGCTCTTCCTATTGTCAAAGACATCACAATTAAAAATATTTGGGGCGTGAATGTACAGCAAGCTGGTTCTATATATGGCTTGAGAGACTCTCCATTTACTGGTATATGTCTTTCGAACATCAACCTTCGCGGTGCGACAAGGCCAAGATCAGTACCGTGGACTTGCTCGTATGTAAGTGGTGCAGCTTCTTTGGTTAGTCCATGGCCGTGCTCGGAGCTCACCAGCACAGACCAAGATGGCCTGTGCTCTGATAATTTCTAAATACATGTACTTCATATATTTTGTTCTTTAAACTTGTGAAATTTTCACATTCTCAGTTTGTAGCATCTATATTTTATTTGTCTTGAAAGTGTTTACGAAGATGTTCAATATCATAATGGAAGTATCGAATGTATTAAAATTTGAACTTGTTCTACGGAAAGTTAGACTAAAATGTAATGAGACTCAAAGTGTAGGGCCTAAAGACAGGTATTTTAACCCAAGAAAATTAAAAAATAAGTCCATTGTTTTGCCTTTTTTACCCAATATTCTCTCATGTTGAATAATGAATTAAAGTTATTTTTCGTTTTTTGTTTCCATACTTTCTGTTCTCAAATATGAAAACAAACAACCTAGAAC

mRNA sequence

ATGCTCCCCTTTCCCCTCTTCATTTTCATCTTCTTCACTACCCTTTTCCCCTCTCCTCTCGCCGTCGCCGACCTCACTACCTGCTCCGGTATAGTCCCCATGAAGTACAGGAACGACAAGATTTCCATTGCCGACTTTGGTGGAATCGGCGATGGTCGAACATTGAATACCAGAGCCTTTCGAGCTGCCATTTATCGGATTCAGCATTTGAGGAGACGAGGGGGTACTTTGCTTTACATTCCTCCGGGGGTTTACTTGACCGAGACCTTCAATCTCACTAGCCATATGACTCTCTATCTTGCTAAAGGCGCTGTTATCAAAGCTGTTCAGGATTCTTCAAATTGGCCAGTAATAGCTCCGTTGCCATCTTATGGAAGAGGGAGAGAGCGCCCTGGAGGAAGATATATAAGCCTTATCCATGGAGATGGTGTTCATGATGTGGTGATCACTGGTGAGAATGGGACTATTGATGGCCAAGGTGATGCCTGGTGGAATATGTGGAGGACAGGAACTCTGAAGTACACTAGGCCTAGTCTTGTTGAATTTGTCAATTCATACAATATCATCATATCCAATGTAATGTTCCTGAATTCTCCGTTTTGGAACATTCACCCTGTTTACTGCCGGAATGTTGTTGTCAGATATGTCACAATATTGGCTCCTCGTGATTCCCCTAACACCGATGGAGTTGATCCAGATTCAAGCAATAACGTTTGCATAGAAGATTCCTACATTTCAACTGGAGATGATCTTGTAGCTGTGAAGAGTGGGTGGGATGAATACGGTATTGCTTATGGTCGCTGTAGTTACGACATTACCATCCGAAGAATTTCGGGGTCTAGTCCATTTGCTGGAGTTGCAGTTGGAAGTGAAGCCTCTGGTGGAGTGGCAAATGTATTGGCAGAACACCTGAACTTTTACGATATGGGAGTTGGTATCAACATCAAGACAAACATCGGAAGGGGAGGGTTCATAAAGAACATAACTGTGTCCAATGTCTACATGGAGAATTCAAGAAAGGGTCTAAAGATTGCTGGCGATGCCGGAGATCATCCCGACGACAAGTTCGACCCAAATGCTCTTCCTATTGTCAAAGACATCACAATTAAAAATATTTGGGGCGTGAATGTACAGCAAGCTGGTTCTATATATGGCTTGAGAGACTCTCCATTTACTGGTATATGTCTTTCGAACATCAACCTTCGCGGTGCGACAAGGCCAAGATCAGTACCGTGGACTTGCTCGTATGTAAGTGGTGCAGCTTCTTTGGTTAGTCCATGGCCGTGCTCGGAGCTCACCAGCACAGACCAAGATGGCCTGTGCTCTGATAATTTCTAA

Coding sequence (CDS)

ATGCTCCCCTTTCCCCTCTTCATTTTCATCTTCTTCACTACCCTTTTCCCCTCTCCTCTCGCCGTCGCCGACCTCACTACCTGCTCCGGTATAGTCCCCATGAAGTACAGGAACGACAAGATTTCCATTGCCGACTTTGGTGGAATCGGCGATGGTCGAACATTGAATACCAGAGCCTTTCGAGCTGCCATTTATCGGATTCAGCATTTGAGGAGACGAGGGGGTACTTTGCTTTACATTCCTCCGGGGGTTTACTTGACCGAGACCTTCAATCTCACTAGCCATATGACTCTCTATCTTGCTAAAGGCGCTGTTATCAAAGCTGTTCAGGATTCTTCAAATTGGCCAGTAATAGCTCCGTTGCCATCTTATGGAAGAGGGAGAGAGCGCCCTGGAGGAAGATATATAAGCCTTATCCATGGAGATGGTGTTCATGATGTGGTGATCACTGGTGAGAATGGGACTATTGATGGCCAAGGTGATGCCTGGTGGAATATGTGGAGGACAGGAACTCTGAAGTACACTAGGCCTAGTCTTGTTGAATTTGTCAATTCATACAATATCATCATATCCAATGTAATGTTCCTGAATTCTCCGTTTTGGAACATTCACCCTGTTTACTGCCGGAATGTTGTTGTCAGATATGTCACAATATTGGCTCCTCGTGATTCCCCTAACACCGATGGAGTTGATCCAGATTCAAGCAATAACGTTTGCATAGAAGATTCCTACATTTCAACTGGAGATGATCTTGTAGCTGTGAAGAGTGGGTGGGATGAATACGGTATTGCTTATGGTCGCTGTAGTTACGACATTACCATCCGAAGAATTTCGGGGTCTAGTCCATTTGCTGGAGTTGCAGTTGGAAGTGAAGCCTCTGGTGGAGTGGCAAATGTATTGGCAGAACACCTGAACTTTTACGATATGGGAGTTGGTATCAACATCAAGACAAACATCGGAAGGGGAGGGTTCATAAAGAACATAACTGTGTCCAATGTCTACATGGAGAATTCAAGAAAGGGTCTAAAGATTGCTGGCGATGCCGGAGATCATCCCGACGACAAGTTCGACCCAAATGCTCTTCCTATTGTCAAAGACATCACAATTAAAAATATTTGGGGCGTGAATGTACAGCAAGCTGGTTCTATATATGGCTTGAGAGACTCTCCATTTACTGGTATATGTCTTTCGAACATCAACCTTCGCGGTGCGACAAGGCCAAGATCAGTACCGTGGACTTGCTCGTATGTAAGTGGTGCAGCTTCTTTGGTTAGTCCATGGCCGTGCTCGGAGCTCACCAGCACAGACCAAGATGGCCTGTGCTCTGATAATTTCTAA

Protein sequence

MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSELTSTDQDGLCSDNF*

Homology

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BLAST of CsaV3_5G002080 vs. NCBI nr
Match: XP_004143871.1 (probable polygalacturonase [Cucumis sativus] >KGN50025.1 hypothetical protein Csa_000391 [Cucumis sativus])

HSP 1 Score: 918.3 bits (2372), Expect = 2.5e-263
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF
Sbjct: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP
Sbjct: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV
Sbjct: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI
Sbjct: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDNF 446
           ASLVSPWPCSELTSTDQDGLCSDNF
Sbjct: 421 ASLVSPWPCSELTSTDQDGLCSDNF 445

[Close]

BLAST of CsaV3_5G002080 vs. NCBI nr
Match: XP_008437386.1 (PREDICTED: probable polygalacturonase [Cucumis melo] >KAA0042687.1 putative polygalacturonase [Cucumis melo var. makuwa] >TYK06090.1 putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 884.0 bits (2283), Expect = 5.3e-253
Identity = 425/445 (95.51%), Postives = 432/445 (97.08%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           M+PF LF+FIFFTTLFPSPLAVADL TCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF
Sbjct: 1   MVPFSLFVFIFFTTLFPSPLAVADLITCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP
Sbjct: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRY+S IHG GVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRP+LV
Sbjct: 121 LPSYGRGRERPGGRYVSFIHGHGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPNLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EF+NSYNIIISNVMFLNSPFWNIHPVYC NVVVRYVTILAPRDSPNTDGVDPDSSNNVCI
Sbjct: 181 EFINSYNIIISNVMFLNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGR SYDITIRRISGSSPFAGVAVGSE SGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRSSYDITIRRISGSSPFAGVAVGSETSGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGD GDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDTGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKN WGV VQQAGSIYGLRDSPFTGICLSNIN RG TRPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNAWGVKVQQAGSIYGLRDSPFTGICLSNINFRGTTRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDNF 446
           A +VSPWPCSELTST+QDGLCSDNF
Sbjct: 421 ALMVSPWPCSELTSTEQDGLCSDNF 445

[Close]

BLAST of CsaV3_5G002080 vs. NCBI nr
Match: XP_038876129.1 (probable polygalacturonase [Benincasa hispida])

HSP 1 Score: 873.6 bits (2256), Expect = 7.2e-250
Identity = 418/445 (93.93%), Postives = 432/445 (97.08%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           M+PF LFIF +FTTLFPSPLAVADLTTCSGIVPMKYRNDKISI DFGGIGDGRTLNTRAF
Sbjct: 1   MVPFFLFIFFYFTTLFPSPLAVADLTTCSGIVPMKYRNDKISITDFGGIGDGRTLNTRAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQHLRRRGGTLLYIPPGVYLTE+FNLTSHMTLYLAKGAVI+AVQDSSNWPVIAP
Sbjct: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQDSSNWPVIAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRY+S IHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLK+TRP+LV
Sbjct: 121 LPSYGRGRERPGGRYVSFIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKFTRPNLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EF+NSYNIIISNVMFLNSPFWNIHPVYC NVVVRYVTILAPRDSPNTDGVDPDSSNNVCI
Sbjct: 181 EFINSYNIIISNVMFLNSPFWNIHPVYCTNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGR SYDITIRR+SGSSPFAGVAVGSE SGGV NVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRSSYDITIRRVSGSSPFAGVAVGSETSGGVENVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMGVGINIKTNIGRGGFI+NITVSNVYME+SRKGLKIAGD GDHPDDK+DPNA
Sbjct: 301 AEHLNFYDMGVGINIKTNIGRGGFIRNITVSNVYMESSRKGLKIAGDTGDHPDDKYDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKN+WG NVQQAGSIYGLR+SPFTGICLSNINLRGA RPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNVWGENVQQAGSIYGLRNSPFTGICLSNINLRGARRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDNF 446
           A LVSPWPCSELTST QDGLCSDNF
Sbjct: 421 ALLVSPWPCSELTSTQQDGLCSDNF 445

[Close]

BLAST of CsaV3_5G002080 vs. NCBI nr
Match: XP_022970040.1 (probable polygalacturonase [Cucurbita maxima] >XP_022970041.1 probable polygalacturonase [Cucurbita maxima])

HSP 1 Score: 852.8 bits (2202), Expect = 1.3e-243
Identity = 407/444 (91.67%), Postives = 424/444 (95.50%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           MLPF LFIFI+F TL PSP A+A LTTCSGIVPM YRNDKISI DFGGIGDGRTLNT+AF
Sbjct: 1   MLPFSLFIFIYFATLLPSPFAIAQLTTCSGIVPMNYRNDKISITDFGGIGDGRTLNTKAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQ+L+RRGGTLLYIPPGVYLTE+FNLTSHMTLYLAK AVIKAVQ SSNWPV+AP
Sbjct: 61  RAAIYRIQNLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKDAVIKAVQGSSNWPVVAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRY+S IHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLK+TRP+LV
Sbjct: 121 LPSYGRGRERPGGRYVSFIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKFTRPNLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EF+NSYNIIISNVMFLNSPFWNIHPVYC NVVVRYVTILAPRDSPNTDG+DPDSSNNVCI
Sbjct: 181 EFINSYNIIISNVMFLNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGR SYDITIRR+SGSSPFAGVAVGSE SGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRSSYDITIRRVSGSSPFAGVAVGSETSGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMG+GINIKTNIGRGGFIKNITVSNVYME SRKGLKIAGD GDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGIGINIKTNIGRGGFIKNITVSNVYMERSRKGLKIAGDTGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKN+WGVNVQQAGSIYGLR+SPFTGICLSNI+LRGA RPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNVWGVNVQQAGSIYGLRNSPFTGICLSNIHLRGAMRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDN 445
           A LVSPWPCSELTST QDG CS N
Sbjct: 421 ALLVSPWPCSELTSTQQDGSCSAN 444

[Close]

BLAST of CsaV3_5G002080 vs. NCBI nr
Match: XP_023550399.1 (probable polygalacturonase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 851.3 bits (2198), Expect = 3.8e-243
Identity = 406/444 (91.44%), Postives = 423/444 (95.27%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           MLPF LFIFI+F TL PSP A+A LTTCSGIVPM YRNDKISI DFGGIGDGRTLNT+AF
Sbjct: 1   MLPFSLFIFIYFATLLPSPFAIAQLTTCSGIVPMNYRNDKISITDFGGIGDGRTLNTKAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQHL+RRGGTLLYIPPGVYLTE+FNLTSHMTLYLAK AVIKAVQ SSNWPV+AP
Sbjct: 61  RAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKDAVIKAVQGSSNWPVVAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRY+S IHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLK+TRP+LV
Sbjct: 121 LPSYGRGRERPGGRYVSFIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKFTRPNLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EF+NSY+IIISNV FLNSPFWNIHPVYC NVVVRYVTILAPRDSPNTDG+DPDSSNNVCI
Sbjct: 181 EFINSYDIIISNVRFLNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGR SYDITIRR+SGSSPFAGVAVGSE SGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRSSYDITIRRVSGSSPFAGVAVGSETSGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMG+GINIKTNIGRGGFIKNITVSNVYME SRKGLKIAGD GDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGIGINIKTNIGRGGFIKNITVSNVYMERSRKGLKIAGDTGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKN+WGVNVQQAGSIYGLR+SPFTGICLSNI+LRGA RPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNVWGVNVQQAGSIYGLRNSPFTGICLSNIHLRGAMRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDN 445
           A LVSPWPCSELTST QDG CS N
Sbjct: 421 ALLVSPWPCSELTSTQQDGSCSAN 444

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy Swiss-Prot
Match: A7PZL3 (Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.4e-117
Identity = 205/409 (50.12%), Postives = 277/409 (67.73%), Query Frame = 0


Query: 37  RNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHM 96
           R    S+ DFGG+GDG+TLNT+AF+ A+  +      GG  LY+P G +LT +F+LTSH 
Sbjct: 59  RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 118

Query: 97  TLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTI 156
           TL+L + AV+ A QD S WPVI PLPSYGRGR+   GRY SLI G  + DV+ITG+NGTI
Sbjct: 119 TLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTI 178

Query: 157 DGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYV 216
           DGQG  WW  +  G LKYTRP L+E + S +I ISN+  LNSP WN+HPVY RN++++ +
Sbjct: 179 DGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGI 238

Query: 217 TILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRR 276
           TILAP  SPNTDG++PDS  N  IED YI +GDD VAVKSGWDEYGIAYG  +  + IRR
Sbjct: 239 TILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRR 298

Query: 277 ISGSSPFAGV-AVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYM 336
           ++  SP++ V A+GSE SGG+ +V AE +   +   GI IKT IGRGG++K+I V  + M
Sbjct: 299 LTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTM 358

Query: 337 ENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGIC 396
           +  +    + G+ G H D+ +DP A P+++ I  +++   NV  A  + G+   PFTGIC
Sbjct: 359 KTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGIC 418

Query: 397 LSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSEL--TSTDQDGLCS 443
           +SN+ +  A + + VPWTC+ V G +S V+P PCS L     ++  LC+
Sbjct: 419 ISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCN 467

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-28
Identity = 103/375 (27.47%), Postives = 174/375 (46.40%), Query Frame = 0


Query: 41  ISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPG-VYLTETFNLTS--HMT 100
           +S++DFG  GDG+T +T+AF  A  +       G   L +P G  YL ++  LT   +  
Sbjct: 68  VSVSDFGAKGDGKTDDTQAFVNAWKKA--CSSNGAVNLLVPKGNTYLLKSIQLTGPCNSI 127

Query: 101 LYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVIT-GENGTI 160
           L +     + A Q  S++  I+                   I  DGV+++ +  G+ G +
Sbjct: 128 LTVQIFGTLSASQKRSDYKDIS-----------------KWIMFDGVNNLSVDGGDTGVV 187

Query: 161 DGQGDAWW-NMWRTGTLK--YTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVV 220
           DG G+ WW N  +    K     P+ + F NS ++I+ N+   N+    I    C NV V
Sbjct: 188 DGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQV 247

Query: 221 RYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDIT 280
             V + AP DSPNTDG+   ++ N+ + +S I TGDD ++++SG           S ++ 
Sbjct: 248 SNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQ 307

Query: 281 IRRISGSSPFAGVAVGS----EASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNIT 340
           I  I+   P  G+++GS     +   V+ V  +         G+ IKT  G  G   NI 
Sbjct: 308 INDIT-CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNII 367

Query: 341 VSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGL-RD 400
             N+ M+N +  + I  D  D      + +A+  VK++  ++I G +  +    +   ++
Sbjct: 368 FQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQ-VKNVVYRDISGTSASENAITFNCSKN 410

Query: 401 SPFTGICLSNINLRG 404
            P  GI L  +N++G
Sbjct: 428 YPCQGIVLDRVNIKG 410

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy Swiss-Prot
Match: Q9LW07 (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.1e-26
Identity = 114/415 (27.47%), Postives = 186/415 (44.82%), Query Frame = 0


Query: 38  NDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMT 97
           ++ + +  FG +GDG T +++AF  A   +      G     +P G+    TF L     
Sbjct: 21  SNALDVTQFGAVGDGVTDDSQAFLKAWEAV--CSGTGDGQFVVPAGM----TFMLQP--- 80

Query: 98  LYLAKGAVIKAVQDSSNWPVIAPL------PSYGRGRERPGGRYISLIHGDGVHDVVITG 157
                   +K      + PV   +      PS G  +   G +   ++  D +  +VI G
Sbjct: 81  --------LKFQGSCKSTPVFVQMLGKLVAPSKGNWK---GDKDQWILFTD-IEGLVIEG 140

Query: 158 ENGTIDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNV 217
           + G I+GQG +WW        K +RP+ ++F +  N+ +S +  L+SP  +IH   C  V
Sbjct: 141 D-GEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYV 200

Query: 218 VVRYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYD 277
            +  + I AP  SPNTDG+D  +S+NV I+D  I+TGDD +A+ SG     I+   C   
Sbjct: 201 TISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDC--- 260

Query: 278 ITIRRISGSSPFAGVAVGSEASGG----VANVLAEHLNFYDMGVGINIKTNIGRGGFIKN 337
                     P  G+++GS    G    V NV  ++ NF     G  IKT  G  G+ + 
Sbjct: 261 ---------GPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARM 320

Query: 338 ITVSNVYMENSRKGLKIAG--DAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYG 397
           IT + + ++N    + I    + GD  + K   ++   V  +   N  G +  + G  + 
Sbjct: 321 ITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFR 380

Query: 398 LRDS-PFTGICLSNINLRGAT--RPRSVPWTCSYVSGAASLVSP-WPCSELTSTD 437
             +  P T I L ++ +  A+    +     C  V GA+++  P   C EL STD
Sbjct: 381 CSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGLECLEL-STD 394

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy Swiss-Prot
Match: O23147 (Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-24
Identity = 99/375 (26.40%), Postives = 164/375 (43.73%), Query Frame = 0


Query: 41  ISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYL 100
           +S+++FG  GDG+T +T+AF+ A  +       G T   +P G               YL
Sbjct: 68  VSVSNFGAKGDGKTDDTQAFKKAWKKA--CSTNGVTTFLVPKG-------------KTYL 127

Query: 101 AKGAVIKA-VQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVIT-GENGTIDG 160
            K    +   +   N+ ++  L +  +  +     +  ++  + V+++ I  G  G I+G
Sbjct: 128 LKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNHWLIL--EDVNNLSIDGGSTGIING 187

Query: 161 QGDAWW-NMWRTGTLK--YTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRY 220
            G  WW N  +    K     P+ +   N  N+ + N+   N+    I    C  V V  
Sbjct: 188 NGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSN 247

Query: 221 VTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIR 280
           V I AP DSPNTDG+   ++ N+ + +S I TGDD ++++ G     I      +D+T  
Sbjct: 248 VEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQI------FDLT-- 307

Query: 281 RISGSSPFAGVAVGS----EASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVS 340
                 P  G+++GS     +   V+ +  +   F +   G+ IKT  G  G  KNI   
Sbjct: 308 ----CGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQ 367

Query: 341 NVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDS-P 400
           N+ MEN +  + I  D  D  D   D  +   VK++  KNI G +           +  P
Sbjct: 368 NIRMENVKNPIIIDQDYCD-KDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYP 412

Query: 401 FTGICLSNINLRGAT 406
             GI L N+ ++G T
Sbjct: 428 CQGIVLENVKIKGGT 412

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.0e-22
Identity = 82/260 (31.54%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 154 GTIDGQGDAWWN------MWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVY 213
           G IDGQG  WW         RT      RP+ ++   S ++ +  +  +NSP +++    
Sbjct: 154 GVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGE 213

Query: 214 CRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGR 273
           C  V ++ + I APRDSPNTDG+D  +S    IE   I TGDD +A+ +G          
Sbjct: 214 CEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG---------- 273

Query: 274 CSYDITIRRISGSSPFAGVAVGS----EASGGVANVLAEHLNFYDMGVGINIKTNIGRGG 333
            S +ITI+ +    P  G+++GS     +   V++V      F D   G+ IKT  G  G
Sbjct: 274 -SSNITIKDLI-CGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSG 333

Query: 334 FIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSI 393
               IT  NV M NS   + I            +  +   ++ +T KNI G +   A   
Sbjct: 334 LASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQ 393

Query: 394 YGLRDS-PFTGICLSNINLR 403
               DS P TGI LSN++L+
Sbjct: 394 LMCSDSVPCTGIQLSNVSLK 401

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy TrEMBL
Match: A0A0A0KK36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150430 PE=3 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 1.2e-263
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF
Sbjct: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP
Sbjct: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV
Sbjct: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI
Sbjct: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDNF 446
           ASLVSPWPCSELTSTDQDGLCSDNF
Sbjct: 421 ASLVSPWPCSELTSTDQDGLCSDNF 445

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy TrEMBL
Match: A0A5A7TLS6 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001910 PE=3 SV=1)

HSP 1 Score: 884.0 bits (2283), Expect = 2.6e-253
Identity = 425/445 (95.51%), Postives = 432/445 (97.08%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           M+PF LF+FIFFTTLFPSPLAVADL TCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF
Sbjct: 1   MVPFSLFVFIFFTTLFPSPLAVADLITCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP
Sbjct: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRY+S IHG GVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRP+LV
Sbjct: 121 LPSYGRGRERPGGRYVSFIHGHGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPNLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EF+NSYNIIISNVMFLNSPFWNIHPVYC NVVVRYVTILAPRDSPNTDGVDPDSSNNVCI
Sbjct: 181 EFINSYNIIISNVMFLNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGR SYDITIRRISGSSPFAGVAVGSE SGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRSSYDITIRRISGSSPFAGVAVGSETSGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGD GDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDTGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKN WGV VQQAGSIYGLRDSPFTGICLSNIN RG TRPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNAWGVKVQQAGSIYGLRDSPFTGICLSNINFRGTTRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDNF 446
           A +VSPWPCSELTST+QDGLCSDNF
Sbjct: 421 ALMVSPWPCSELTSTEQDGLCSDNF 445

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy TrEMBL
Match: A0A1S3ATJ9 (probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103482817 PE=3 SV=1)

HSP 1 Score: 884.0 bits (2283), Expect = 2.6e-253
Identity = 425/445 (95.51%), Postives = 432/445 (97.08%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           M+PF LF+FIFFTTLFPSPLAVADL TCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF
Sbjct: 1   MVPFSLFVFIFFTTLFPSPLAVADLITCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP
Sbjct: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRY+S IHG GVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRP+LV
Sbjct: 121 LPSYGRGRERPGGRYVSFIHGHGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPNLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EF+NSYNIIISNVMFLNSPFWNIHPVYC NVVVRYVTILAPRDSPNTDGVDPDSSNNVCI
Sbjct: 181 EFINSYNIIISNVMFLNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGR SYDITIRRISGSSPFAGVAVGSE SGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRSSYDITIRRISGSSPFAGVAVGSETSGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGD GDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDTGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKN WGV VQQAGSIYGLRDSPFTGICLSNIN RG TRPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNAWGVKVQQAGSIYGLRDSPFTGICLSNINFRGTTRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDNF 446
           A +VSPWPCSELTST+QDGLCSDNF
Sbjct: 421 ALMVSPWPCSELTSTEQDGLCSDNF 445

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy TrEMBL
Match: A0A6J1I1Q1 (probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111469049 PE=3 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 6.3e-244
Identity = 407/444 (91.67%), Postives = 424/444 (95.50%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           MLPF LFIFI+F TL PSP A+A LTTCSGIVPM YRNDKISI DFGGIGDGRTLNT+AF
Sbjct: 1   MLPFSLFIFIYFATLLPSPFAIAQLTTCSGIVPMNYRNDKISITDFGGIGDGRTLNTKAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQ+L+RRGGTLLYIPPGVYLTE+FNLTSHMTLYLAK AVIKAVQ SSNWPV+AP
Sbjct: 61  RAAIYRIQNLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKDAVIKAVQGSSNWPVVAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRY+S IHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLK+TRP+LV
Sbjct: 121 LPSYGRGRERPGGRYVSFIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKFTRPNLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EF+NSYNIIISNVMFLNSPFWNIHPVYC NVVVRYVTILAPRDSPNTDG+DPDSSNNVCI
Sbjct: 181 EFINSYNIIISNVMFLNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGR SYDITIRR+SGSSPFAGVAVGSE SGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRSSYDITIRRVSGSSPFAGVAVGSETSGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMG+GINIKTNIGRGGFIKNITVSNVYME SRKGLKIAGD GDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGIGINIKTNIGRGGFIKNITVSNVYMERSRKGLKIAGDTGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKN+WGVNVQQAGSIYGLR+SPFTGICLSNI+LRGA RPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNVWGVNVQQAGSIYGLRNSPFTGICLSNIHLRGAMRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDN 445
           A LVSPWPCSELTST QDG CS N
Sbjct: 421 ALLVSPWPCSELTSTQQDGSCSAN 444

[Close]

BLAST of CsaV3_5G002080 vs. ExPASy TrEMBL
Match: A0A6J1EMW9 (probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111435810 PE=3 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.7e-242
Identity = 405/444 (91.22%), Postives = 421/444 (94.82%), Query Frame = 0


Query: 1   MLPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAF 60
           MLPF LFIFI   TL PSP A+A LTTCSGIVPM YRNDKISI DFGGIGDGRTLNT+AF
Sbjct: 1   MLPFSLFIFIHLATLLPSPFAIAQLTTCSGIVPMNYRNDKISITDFGGIGDGRTLNTKAF 60

Query: 61  RAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAP 120
           RAAIYRIQHL+RRGGTLLYIPPGVYLTE+FNLTSHMTLYLAK AVIKAVQ SSNWPV+AP
Sbjct: 61  RAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKDAVIKAVQGSSNWPVVAP 120

Query: 121 LPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLV 180
           LPSYGRGRERPGGRY+S IHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLK+TRP+LV
Sbjct: 121 LPSYGRGRERPGGRYVSFIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKFTRPNLV 180

Query: 181 EFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCI 240
           EF+NSY+IIISNV FLNSPFWNIHPVYC NVVVRYVTILAPRDSPNTDG+DPDSSNNVCI
Sbjct: 181 EFINSYDIIISNVRFLNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSNNVCI 240

Query: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVL 300
           EDSYISTGDDLVAVKSGWDEYGIAYGR SYDITIRR+SGSSPFAGVAVGSE SGGVANVL
Sbjct: 241 EDSYISTGDDLVAVKSGWDEYGIAYGRSSYDITIRRVSGSSPFAGVAVGSETSGGVANVL 300

Query: 301 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 360
           AEHLNFYDMG+GINIKTNIGRGGFIKNITVSNVYME SRKGLKIAGD GDHPDDKFDPNA
Sbjct: 301 AEHLNFYDMGIGINIKTNIGRGGFIKNITVSNVYMERSRKGLKIAGDTGDHPDDKFDPNA 360

Query: 361 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 420
           LPIVKDITIKN+WGVNVQQAGSIYGLR+SPFTGICLSNI+LRGATRPRSVPWTCSYVSGA
Sbjct: 361 LPIVKDITIKNVWGVNVQQAGSIYGLRNSPFTGICLSNIHLRGATRPRSVPWTCSYVSGA 420

Query: 421 ASLVSPWPCSELTSTDQDGLCSDN 445
           A LVSPWPCS LTST QDG CS N
Sbjct: 421 ALLVSPWPCSALTSTQQDGSCSAN 444

[Close]

BLAST of CsaV3_5G002080 vs. TAIR 10
Match: AT4G23820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 677.2 bits (1746), Expect = 9.2e-195
Identity = 320/442 (72.40%), Postives = 377/442 (85.29%), Query Frame = 0


Query: 6   LFIFIF-FTTLFPSPLAVADL-TTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAFRAA 65
           L + IF F+ LF S  ++ D   TCSGIVP++YR DKISI DFGG+GDGRT+NT+AFRAA
Sbjct: 4   LSVSIFLFSCLFVSSSSLGDSEATCSGIVPLRYRYDKISITDFGGVGDGRTVNTKAFRAA 63

Query: 66  IYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAPLPS 125
           IYRIQHL+RRGGTLLYIPPGVYLTE+FNLTSHMTLYLAKGAVI+AVQD+ NWP+I PLPS
Sbjct: 64  IYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPLPS 123

Query: 126 YGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLVEFV 185
           YGRGRE PGGRY+S IHGDG+ DVVITG+NGTIDGQG+ WWNMWR+ TLKYTRP+L+EF 
Sbjct: 124 YGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFK 183

Query: 186 NSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIEDS 245
           +S  IIISNV+F NSPFWNIHPVYC NVV+ +VTILAP+DSPNTDG+DPDSS NVCIEDS
Sbjct: 184 DSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDS 243

Query: 246 YISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVLAEH 305
           YISTGDDLVA+KSGWD+YGIAYGR S +ITIRRI+GSSPFAG+A+GSE SGG+ N++AEH
Sbjct: 244 YISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIIAEH 303

Query: 306 LNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPI 365
           +   +MGVG+NIKTNIGRGG+IKNI +S+VY++ ++ G+KIAGD GDHPD+ ++PNALP+
Sbjct: 304 ITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDHPDENYNPNALPV 363

Query: 366 VKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAASL 425
           VK I IKN+WGVNV+ AGSI GL+ SPFTGICLS INL G+       W CS VSG +  
Sbjct: 364 VKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKT-WKCSDVSGTSLK 423

Query: 426 VSPWPCSELTSTDQDGLCSDNF 446
           VSPWPCSEL +T    LCS  F
Sbjct: 424 VSPWPCSELRTTGGSNLCSSTF 444

[Close]

BLAST of CsaV3_5G002080 vs. TAIR 10
Match: AT5G41870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 615.1 bits (1585), Expect = 4.3e-176
Identity = 291/443 (65.69%), Postives = 354/443 (79.91%), Query Frame = 0


Query: 3   PFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAFRA 62
           P  +F+    +T+ P  L++    TCSGIVPMK+RN+ +SI+DFG +GDG+TLNT+AF +
Sbjct: 7   PISVFVLFLLSTVLPHHLSLGAPITCSGIVPMKHRNEMLSISDFGAVGDGKTLNTKAFNS 66

Query: 63  AIYRIQHLRRRG-GTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAPL 122
           AI RI++      GTLLY+P GVYLT++FNLTSHMTLYLA GAVIKAVQD+  WP+  PL
Sbjct: 67  AIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQDTEKWPLTDPL 126

Query: 123 PSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLVE 182
           PSYGRGRE PG RYIS IHGDG++DVVITG NGTIDGQG+ WWNMWR GTLK+TRP L+E
Sbjct: 127 PSYGRGREHPGRRYISFIHGDGLNDVVITGRNGTIDGQGEPWWNMWRHGTLKFTRPGLIE 186

Query: 183 FVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIE 242
           F NS NI++S+V+  NSPFW +HPVYC NVVV +VTILAP DS NTDG+DPDSS+NVCIE
Sbjct: 187 FNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSSSNVCIE 246

Query: 243 DSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAGVAVGSEASGGVANVLA 302
           DSYISTGDDLVAVKSGWDEYGIAY R S DITIRRI+GSSPFAG+A+GSE SGG+ NV  
Sbjct: 247 DSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSPFAGIAIGSETSGGIQNVTV 306

Query: 303 EHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNAL 362
           E++  Y+ G+GI+IKTNIGRGG I+ IT+S VY+E  R G+KI+GD GDHPDDKF+ +AL
Sbjct: 307 ENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHPDDKFNTSAL 366

Query: 363 PIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAA 422
           PIV+ ITIKN+WG+ V++AG + GL+DSPFT +C SN+ L G    RS  W CS V GAA
Sbjct: 367 PIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGT--KRSPIWKCSDVVGAA 426

Query: 423 SLVSPWPCSELTSTDQDGLCSDN 445
             V+P PC EL++T Q G   +N
Sbjct: 427 DKVNPTPCPELSATTQQGGSCEN 447

[Close]

BLAST of CsaV3_5G002080 vs. TAIR 10
Match: AT4G33440.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 451.4 bits (1160), Expect = 8.2e-127
Identity = 220/412 (53.40%), Postives = 287/412 (69.66%), Query Frame = 0


Query: 24  DLTTCSGIVPMKYRNDKI--SIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIP 83
           D  TCSG        ++I  SI DFGG+GDG+T NT AFR A+  ++     GG  L +P
Sbjct: 53  DPVTCSGFFNHDPFPNRIVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVP 112

Query: 84  PGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHG 143
            G +L+ +FNLTS+ TL+L +GA+I   +D   WP+I PLPSYGRGRERPGGR+ISLIHG
Sbjct: 113 EGTWLSGSFNLTSNFTLFLERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHG 172

Query: 144 DGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFW 203
           D + +VVITGENGTIDGQG  WW +W   TL +TR  L+E  NS+NI+ISN+  LNSPFW
Sbjct: 173 DNLTNVVITGENGTIDGQGKMWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFW 232

Query: 204 NIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEY 263
            IHPVYC NVV+R +TILAP ++PNTDG+DPDSS NVCIED YI +GDDLVAVKSGWD+Y
Sbjct: 233 TIHPVYCSNVVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQY 292

Query: 264 GIAYGRCSYDITIRRISGSS-PFAGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIG 323
           G+A  R S +I IRRISG++   +GV +GSE SGG+ N+  E ++ +D   G+ IKT+ G
Sbjct: 293 GMAVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKG 352

Query: 324 RGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQA 383
           RGG+I NIT +NV +E  +  ++ +  + DH DDK+DP ALP VK I I N+  +N ++A
Sbjct: 353 RGGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKA 412

Query: 384 GSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSEL 433
             + G+  + F  +CL N+ L G   P++  W C  VSG AS V P  C +L
Sbjct: 413 PMLLGVEGTSFQDVCLRNVTLLGL--PKTEKWKCKDVSGYASDVFPLSCPQL 462

[Close]

BLAST of CsaV3_5G002080 vs. TAIR 10
Match: AT3G62110.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 451.1 bits (1159), Expect = 1.1e-126
Identity = 210/392 (53.57%), Postives = 280/392 (71.43%), Query Frame = 0


Query: 36  YRNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSH 95
           +R   +SI +FG +GDG TLNT+AF+ A++ +     +GG  L++P G +LT +F+L SH
Sbjct: 38  HRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISH 97

Query: 96  MTLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENGT 155
           +TL+L KGA I     S NWPV+ PLPSYGRGRE PG R+ SLI+G  + DVVITGENGT
Sbjct: 98  LTLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGT 157

Query: 156 IDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRY 215
           IDGQG  WW+ +R G L YTRP LVE +NS  +IISN+ FLNSPFWNIHPVYCR+VVV+ 
Sbjct: 158 IDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKN 217

Query: 216 VTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIR 275
           +TILAP +SPNTDGVDPDSS NVCIED YI TGDDLV++KSGWDEYGI+Y R S  I I 
Sbjct: 218 LTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKIN 277

Query: 276 RISG-SSPFAGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVY 335
           R++G ++  +G+A+GSE SGGV+ +  + L+ ++   GI IKT+ GRGG+++N+ + NV 
Sbjct: 278 RLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVK 337

Query: 336 MENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGI 395
           ++N +K ++  G  G+HPD+K+DP ALP ++ IT +N+ G  +  AG + G+    F  I
Sbjct: 338 LDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNI 397

Query: 396 CLSNINLRGATRPRSVPWTCSYVSGAASLVSP 427
           C  N+ LR     +  PW CS V G +  VSP
Sbjct: 398 CFLNVTLRVKKNSKKSPWECSNVRGYSQWVSP 429

[Close]

BLAST of CsaV3_5G002080 vs. TAIR 10
Match: AT3G16850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 417.9 bits (1073), Expect = 1.0e-116
Identity = 216/435 (49.66%), Postives = 292/435 (67.13%), Query Frame = 0


Query: 2   LPFPLFIFIFFTTLFPSPLAVADLTTCSGIVPMKYRNDKISIADFGGIGDGRTLNTRAFR 61
           +P  L   + FT L  S     +   C     +  R   +SI +FG +GDG+TLNT AF+
Sbjct: 3   MPVALVWLLAFTILLIS--GEGNNAICKENFKLDPRPHSVSILEFGAVGDGKTLNTIAFQ 62

Query: 62  AAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQDSSNWPVIAPL 121
            A++ ++    +GG  LY+PPG +LT +FNLTSH+TL+L KGA I A  D S+W V++PL
Sbjct: 63  NAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVVSPL 122

Query: 122 PSYGRGRERPGGRYISLIHGDGVHDVVITGENGTIDGQGDAWWNMWRTGTLKYTRPSLVE 181
           PSYGRG E PG RY SLI+GD + DVVITGENGT DGQG AWW    +G+L Y+RP ++E
Sbjct: 123 PSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPHIIE 182

Query: 182 FVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSPNTDGVDPDSSNNVCIE 241
           FV+S +I+ISN+ FLN+P  NIHPVYC  + +R V I    DSP+  GV PDSS+NVCIE
Sbjct: 183 FVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNVCIE 242

Query: 242 DSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPF-AGVAVGSEASGGVANVL 301
           DS I+ G D V++KSGWD+YGI YGR +  + IR +   SP  AG++ GSE SGGV++V 
Sbjct: 243 DSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVT 302

Query: 302 AEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNA 361
            E LN +   +G+  +T  GRGG+I+NIT+S+V + +    +   G  G HPDDKFD +A
Sbjct: 303 VERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFDRDA 362

Query: 362 LPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGA 421
           LP+V  I ++N  GV++  AG++ G+ +SPFT ICL++I+L+  TR     W CS VSG 
Sbjct: 363 LPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQ--TRSEE-SWICSNVSGF 422

Query: 422 ASLVSPWPCSELTST 436
           +  VSP PC EL S+
Sbjct: 423 SDDVSPEPCQELMSS 432

The following BLAST results are available for this feature:

BLAST of CsaV3_5G002080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143871.1	2.5e-263	100.00	probable polygalacturonase [Cucumis sativus] >KGN50025.1 hypothetical protein Cs...	[more]
XP_008437386.1	5.3e-253	95.51	PREDICTED: probable polygalacturonase [Cucumis melo] >KAA0042687.1 putative poly...	[more]
XP_038876129.1	7.2e-250	93.93	probable polygalacturonase [Benincasa hispida]	[more]
XP_022970040.1	1.3e-243	91.67	probable polygalacturonase [Cucurbita maxima] >XP_022970041.1 probable polygalac...	[more]
XP_023550399.1	3.8e-243	91.44	probable polygalacturonase [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G002080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7PZL3	3.4e-117	50.12	Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 ...	[more]
Q8RY29	1.7e-28	27.47	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
Q9LW07	6.1e-26	27.47	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g1572...	[more]
O23147	1.1e-24	26.40	Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1	[more]
Q7M1E7	7.0e-22	31.54	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]

BLAST of CsaV3_5G002080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK36	1.2e-263	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150430 PE=3 SV=1	[more]
A0A5A7TLS6	2.6e-253	95.51	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3ATJ9	2.6e-253	95.51	probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103482817 PE=3 SV=1	[more]
A0A6J1I1Q1	6.3e-244	91.67	probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111469049 PE=3 SV=1	[more]
A0A6J1EMW9	2.7e-242	91.22	probable polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111435810 PE=3 SV...	[more]

BLAST of CsaV3_5G002080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23820.1	9.2e-195	72.40	Pectin lyase-like superfamily protein	[more]
AT5G41870.1	4.3e-176	65.69	Pectin lyase-like superfamily protein	[more]
AT4G33440.1	8.2e-127	53.40	Pectin lyase-like superfamily protein	[more]
AT3G62110.1	1.1e-126	53.57	Pectin lyase-like superfamily protein	[more]
AT3G16850.1	1.0e-116	49.66	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 364..398 e-value: 9200.0 score: 0.3 coord: 269..290 e-value: 3700.0 score: 3.1 coord: 325..346 e-value: 130.0 score: 11.4 coord: 208..234 e-value: 370.0 score: 9.9 coord: 296..317 e-value: 1100.0 score: 6.8 coord: 235..267 e-value: 990.0 score: 7.3
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 25..416 e-value: 1.2E-110 score: 372.2
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 138..419 e-value: 4.2E-40 score: 137.8
None	No IPR available	PANTHER	PTHR31339	PECTIN LYASE-RELATED	coord: 10..442
None	No IPR available	PANTHER	PTHR31339:SF3	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 10..442
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 33..433

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G002080.1	CsaV3_5G002080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity