
CsaV3_5G001780 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GATGATATTAAAAAAATTCCACAAACTTTTGATGTAAATAAAAAAAAGAATTTGATTTAAAAAAAACGAAATATATATAAATAAAATTGAGTTCATCGATAGAGTTCTCGGTCTCTCCAAAGAGGGCACAAGCAGTTCTTATTCTGTTCTTTGCAGAATGAGATAATTCACAAAAATCCATACACCCAAACTACGCATTCTTCATTTCAATTCCTTTTCTTCTCTTCCTTCATCCAAAGTTCGACGAAAATTTTCAGAATCGGAAGAGTATTCGAACGGTACTTGCCTTTATATCTGTTCCTCATACACTTCTTTTTCTGCTCCTTTCTTTTGAGTTCCTTGAATGATTTTTCATGTCTCTGTTCCTTAATTATTTTGATTTTGTTCCCATCTTCCAACCCACGAGGTTCCGTAGCTGTTATTCAAGTGAAATCTTAAATGCCCAAAATTTGAGTTTCAGGAACTTGGCATTTTTATTCTATTTATCTGTCGAATGAGATCTTTTAAGTAGTTTATTGTATTTGTTTTGTTAGTATAGCATTCATTTAACTAATATGCATGTAATTTCTGTTGATCTATGGGTAAATGTTGGTGGGTTATGTGTGTTATTGTTGCTTTATTGATGGCCATTAAAACGCTATAGCTTTTGGTTGGAAATTGCTGCCAAGTACCTTTTGTTGCTGCAATACCATACCTGTTGCTTTTTCTTGGAAATTGTTGTCATTGCTTGAATGAAGTGAAATTCATTGTAGTAAATTAGTACCATTTGTTACTGTAACTGGGGTTGGTTTTTATTTTCAAATGGATGTAAAGTACACAGCTAGTCTATATAGGTAAACATAATTGCTTTTACATTATCTTATATTCATCAATATGGGAAGCTCATCCCAATCAAACTCAATTTTATAAGCTTGGGTTGGTTGGATTTATAAAGCAGCTAAATTAATTTTGGTCTATTCTTAGCTCCATTTGAACTGTGTTAGCTGTGAATAGCTCCGTACACATTTTCTCAAGCCCTTGACGCTTAGAAGTTGTCTTCAGTCTTATAGAATCTTAATATTAATAAATTTCTAGTTCTAACAAAGTTGTGGAAATTCAAACTTGAGCTTTAAGAGAGGTTTATAACGCAACCAATTAAGTTTCTAGTTTGAATTGCCAATACCTTCCCTGTGTGCAATAAGTTCCCCAATATTTGAAATAACTTTTTGCAAACCATTTTTTTTAAATGAATGATTATTTATTTCTGATAACAACTCCTAGTTCTTCTAGACTTTGCTTTATTTCTATTTTATTATAAATCAAGTTGTTAGTTGTTTTATGTGATCTTGGTGCTATTTGTCCAAATGATATTTATCAGAAGCTGCTGATTTATGACCTTCACCAAATGTAAACATGGTTGTTCAACTTGACTCTTGATGGTTATGCTCATTGTTTGTAACTCAAATGATTTTTAATGTTGGTTTGCTTAGACAAGGAAACTGACGTGTAAAATCCTACTTTCTACACTTTTTCAGTTTTTCTGGTTGATGTAAGCTACTTGTTTGTGGCCGAAAGGTATTTTGAGGTTTGTAAATTCAACAGCGACAATATGGATATTGCCCTGCCCTTAAAGAGGGCAGAGCTGAAGCATCCAGTTCCCGTAAACTTAACATGGCTATAGTTGGCGCAACAAATGAGTGGAGAGGAAATAGCCACCCAATCTAGATTGAAGTATACGTCAATCTTAATTTTCTTTGGTTGGCCCCTGCTTGGATTGCTGTTTTGAAAATGTTCAACTGAGATTTCATCTCTCAGCAAAATGAATTTTGGACACATTGGGTCCTGCTTGATTGTCTATTCATGTACTTTAGCCCCATCCTGAGTTGAAACTGTCTTAGAAGTACATGGAGAGAGCGAATAGATCTTGAAGACAGATTCAGAAAAAGGGTTGTTTACATCTGAAGCAATGTCCATACTTCCTAGTGCCAAATTTGCAGATTTAAGCCCCACAAAAGATGTTTTTGTTTCAGCCCTCGGCTTTGCTTTGTCAATTAACAGTCCATGTGCCCCATTTGGAGATGAACTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGTTAAGGGCAGACGCCGACACGTCATTGGTAATAAAGGACGATGAAGTAAAATCCGTGTTGAAGACAGGACTTTTTAGAACTTGTAGATCATTTGAGAGGGAGCTATCTTCCCTACTTTTGGAGCCTGACCTTGCATCTCAAGCCAAAGAAGACAAAATACTGAGGACATTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAACTTAATGAAAGACTTCGTTTACAACTGGATCGAGATATCTGGGAACATTCTGAAGGTAATCGAAGACGAAAAGTTGAATTCTTTAATGTGGGGTTTGAAACTTAAGTTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACCGTAATTCTTCCTGCGCCATACCGCTTGTCACTACTTAAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTACTAGATTCGAAGTGCATTGCAGAGACAGATTTTCGTTACAAGATGGACGAAGAACTGTGCATGAACATTGAGGGGGCAATTGTTTCTATGGTATTGGCATTGCCTTCAAATGATCAAGCAGGTATCTTGGCAGACTGGATGAAAGCTGAGGAAATACAATATCCTGATTTAACAGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGATTGAAGGTTTTGACGGAGCTTGCTCTGACAACAGTGATGATGGTACAATCAGCTTTTAAATTCTACTGATAACAATATCTCTGGTACATTCAAATGCTTCTTAATTCATTTTGAGCATAGAAATTATATAAATGTTCCATTAATAAAATTCTCTTTCTGAACTTCTAATTACTTAGTCAGAAGTAGTTGTTTTTGACTAATTATGTTCCGAATGGTTGTTTTGGTGATCCAAAAGTTGGGAAGAGAAGAAATTTAATTGTATACTATCTAACTACAAATTGTTTGAACTATATAATGAATATGTTTAATATTTAAATGATTAATTTGGGCATTTGTTAATCCAAG ATGTCCATACTTCCTAGTGCCAAATTTGCAGATTTAAGCCCCACAAAAGATGTTTTTGTTTCAGCCCTCGGCTTTGCTTTGTCAATTAACAGTCCATGTGCCCCATTTGGAGATGAACTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGTTAAGGGCAGACGCCGACACGTCATTGGTAATAAAGGACGATGAAGTAAAATCCGTGTTGAAGACAGGACTTTTTAGAACTTGTAGATCATTTGAGAGGGAGCTATCTTCCCTACTTTTGGAGCCTGACCTTGCATCTCAAGCCAAAGAAGACAAAATACTGAGGACATTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAACTTAATGAAAGACTTCGTTTACAACTGGATCGAGATATCTGGGAACATTCTGAAGGTAATCGAAGACGAAAAGTTGAATTCTTTAATGTGGGGTTTGAAACTTAAGTTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACCGTAATTCTTCCTGCGCCATACCGCTTGTCACTACTTAAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTACTAGATTCGAAGTGCATTGCAGAGACAGATTTTCGTTACAAGATGGACGAAGAACTGTGCATGAACATTGAGGGGGCAATTGTTTCTATGGTATTGGCATTGCCTTCAAATGATCAAGCAGGTATCTTGGCAGACTGGATGAAAGCTGAGGAAATACAATATCCTGATTTAACAGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGATTGAAGGTTTTGACGGAGCTTGCTCTGACAACAGTGATGATGGTACAATCAGCTTTTAA ATGTCCATACTTCCTAGTGCCAAATTTGCAGATTTAAGCCCCACAAAAGATGTTTTTGTTTCAGCCCTCGGCTTTGCTTTGTCAATTAACAGTCCATGTGCCCCATTTGGAGATGAACTTCAAAGATCTGCTCAGGAACAAGTTGACTACATGTTAAGGGCAGACGCCGACACGTCATTGGTAATAAAGGACGATGAAGTAAAATCCGTGTTGAAGACAGGACTTTTTAGAACTTGTAGATCATTTGAGAGGGAGCTATCTTCCCTACTTTTGGAGCCTGACCTTGCATCTCAAGCCAAAGAAGACAAAATACTGAGGACATTATCTGATCTTGAATGGATATGTTCTTTACTTCCAAAGATGAACTTAATGAAAGACTTCGTTTACAACTGGATCGAGATATCTGGGAACATTCTGAAGGTAATCGAAGACGAAAAGTTGAATTCTTTAATGTGGGGTTTGAAACTTAAGTTGATTGAGATGACCAACAAAGCCTTGGAAGCTGTTGGCTATGGCACCGTAATTCTTCCTGCGCCATACCGCTTGTCACTACTTAAATTCTGGCTTCCATATATCAGGAAGATGAAGCCTCTACTAGATTCGAAGTGCATTGCAGAGACAGATTTTCGTTACAAGATGGACGAAGAACTGTGCATGAACATTGAGGGGGCAATTGTTTCTATGGTATTGGCATTGCCTTCAAATGATCAAGCAGGTATCTTGGCAGACTGGATGAAAGCTGAGGAAATACAATATCCTGATTTAACAGATGCTTTTGAATTATGGTGTTATAGGACCAAATCTGCAAAGCGGAGATTGATTGAAGGTTTTGACGGAGCTTGCTCTGACAACAGTGATGATGGTACAATCAGCTTTTAA MSILPSAKFADLSPTKDVFVSALGFALSINSPCAPFGDELQRSAQEQVDYMLRADADTSLVIKDDEVKSVLKTGLFRTCRSFERELSSLLLEPDLASQAKEDKILRTLSDLEWICSLLPKMNLMKDFVYNWIEISGNILKVIEDEKLNSLMWGLKLKLIEMTNKALEAVGYGTVILPAPYRLSLLKFWLPYIRKMKPLLDSKCIAETDFRYKMDEELCMNIEGAIVSMVLALPSNDQAGILADWMKAEEIQYPDLTDAFELWCYRTKSAKRRLIEGFDGACSDNSDDGTISF* Homology
BLAST of CsaV3_5G001780 vs. NCBI nr
Match: XP_011654681.1 (BTB/POZ domain-containing protein At3g05675 [Cucumis sativus] >KGN49994.1 hypothetical protein Csa_000492 [Cucumis sativus]) HSP 1 Score: 582.4 bits (1500), Expect = 2.2e-162 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. NCBI nr
Match: XP_008437433.1 (PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo] >XP_008437434.1 PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform X1 [Cucumis melo]) HSP 1 Score: 561.6 bits (1446), Expect = 4.0e-156 Identity = 282/292 (96.58%), Postives = 287/292 (98.29%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. NCBI nr
Match: KAA0042659.1 (BTB/POZ domain-containing protein [Cucumis melo var. makuwa] >TYK06061.1 BTB/POZ domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 561.2 bits (1445), Expect = 5.2e-156 Identity = 282/292 (96.58%), Postives = 287/292 (98.29%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. NCBI nr
Match: XP_038875912.1 (BTB/POZ domain-containing protein At3g05675 [Benincasa hispida]) HSP 1 Score: 540.8 bits (1392), Expect = 7.2e-150 Identity = 270/292 (92.47%), Postives = 278/292 (95.21%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. NCBI nr
Match: XP_023520561.1 (BTB/POZ domain-containing protein At3g05675 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 520.4 bits (1339), Expect = 1.0e-143 Identity = 258/292 (88.36%), Postives = 271/292 (92.81%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. ExPASy Swiss-Prot
Match: Q8RX01 (BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=At3g05675 PE=2 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.0e-50 Identity = 117/277 (42.24%), Postives = 173/277 (62.45%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. ExPASy TrEMBL
Match: A0A0A0KMC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148650 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. ExPASy TrEMBL
Match: A0A1S3ATN5 (BTB/POZ domain-containing protein At3g05675 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482849 PE=4 SV=1) HSP 1 Score: 561.6 bits (1446), Expect = 1.9e-156 Identity = 282/292 (96.58%), Postives = 287/292 (98.29%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. ExPASy TrEMBL
Match: A0A5A7TMS3 (BTB/POZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001620 PE=4 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 2.5e-156 Identity = 282/292 (96.58%), Postives = 287/292 (98.29%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. ExPASy TrEMBL
Match: A0A6J1EMX8 (BTB/POZ domain-containing protein At3g05675 OS=Cucurbita moschata OX=3662 GN=LOC111435816 PE=4 SV=1) HSP 1 Score: 518.5 bits (1334), Expect = 1.9e-143 Identity = 257/292 (88.01%), Postives = 271/292 (92.81%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. ExPASy TrEMBL
Match: A0A6J1I2T6 (BTB/POZ domain-containing protein At3g05675 OS=Cucurbita maxima OX=3661 GN=LOC111469077 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 2.7e-142 Identity = 256/292 (87.67%), Postives = 269/292 (92.12%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. TAIR 10
Match: AT4G10800.1 (BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT3G05675.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 252.3 bits (643), Expect = 4.8e-67 Identity = 134/279 (48.03%), Postives = 192/279 (68.82%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. TAIR 10
Match: AT3G05675.2 (BTB/POZ domain-containing protein ) HSP 1 Score: 200.3 bits (508), Expect = 2.2e-51 Identity = 117/277 (42.24%), Postives = 173/277 (62.45%), Query Frame = 0
BLAST of CsaV3_5G001780 vs. TAIR 10
Match: AT3G05675.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 200.3 bits (508), Expect = 2.2e-51 Identity = 117/277 (42.24%), Postives = 173/277 (62.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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