CsaV3_5G000300 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G000300
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	dof zinc finger protein DOF4.6-like
Location	chr5: 146419 .. 149861 (+)
RNA-Seq Expression	CsaV3_5G000300
Synteny	CsaV3_5G000300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGATGGTGATCTCCTCCAAAGGATTTGAGTGATACTGATGATTTGCAATCTACGTTTGATTTTAGTATAGAGGCAATTAAAATGGATTTATTAGTTGTAAATTTACTTGATATCTTTAAAGGAAAGGAGGAAGAAATTTGAAAAGCTCCAAAACCAATAATATTATATATGACAAAGAAGAGCAGAAAGAGTCAAAAATATCAAATCCATCAAATCTTCCCTTAAAGAATGTTATGTTACCATTATCATTGCATGAGAAAAAGTAAATAAAAAGATTTTTTGCTTTTTTTTCTTCTCTTCTGATTTCTTTGGATAGATTAAAATCATAAGTTAATTAGTAATTAAGAAAAGGTAGTACAAATTAAAGTCAGCATTTGGTATATTATTCATGTTTAGCTAGTGGCCTTATTAATTTTAAAACAGACCTACCCTTCTACCAAACTTCTTTCCTCCATGTCTCTCCAACCATGGAAACTGAATACAAGTTAAAGTTCCTTTCAAAAGTGGAAAGTTAGAAGATGGCCTCAAGCCAAGTTAGTGAAATTTAGAAAACCCTAATTCTCATCTTATTTATTTTTGAAATATAGTATGGTTTTGAAATGGTTAGAATATAGAATTCATTTTGAACAATTAGCAAGATGGTTGAGGATAATATTTTATAGAAGTAATTTTAATCGTTTGAAAATGAGAAATGAAAGTTGGTTTTACTTTGAGTGGTATGGAGGGAAGAAAAGAAGTTGTAATATTTAGAAATATAATCGAATAGAGATGGAGGTGGTGGTGGTGGTGGTGGAAACATTGGTGGAAGTTGTTGAGGATGATGGGATTAGTGGTACAAAACTGAGAAGATCATAGGGATAGCTAAAGCGTGATGAGCACTGTGAAAAAGACTTAAACAAAAAAAAGTATTTAAGTATGGGATTTGATTAATTAGGGTTTATTTAAAAGAAAAGGGAAAAGGTGAAAGGACGAAAAGACCCTGATGAAAAGAGAGTAGAAGATGAGTTGGGAGGGGGGGGACACACAAATAAGAGTGATGGATATGAATGGGGGGATCCTAATCCCATGTTTTTTTGCTTTTACACTCATTTTTTCAGACTGAACACACAAAGCTTAAAGCAAAAAAGAAAAAAGAAAAGTGCCATTCTCTTTGATCAGTTTTGTTGTTGCTTTCTTTCTTTCTTTCTTTCCCCCTTTTCCCTTTCCCTTTCCCTTTCTCTCTTCTTCTTAATCCCCCAATGGACACTGCTCATTGGCCACAGGTCTTTCTAATCTCTATCTCTCTCTCTTATTTTATCACTTTTAATTAGCTCTCCCTTCCCTTCCCTTCCCTTTTCCTTTTCTTTTCTTTTATGGGTTCTTGTTAATTAAATTTGTTTTTAGAAATTTGTATTTTTCTCTACTTTCCTTTATCTTTCATTTGTTCACAGTTTTTTTTTTCACTGATTCTCAAAAGGGTCATCGAAAAAAAGCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTGTGGGTCGTCTTAAAAATGGAATCTGACGAATTTGTGGATTTGGTTATCAGTTTGCAGGTGGTGGTGGAATGGTTGTTAAACAAATGGAAGGGGGAGGAGGAGGAGGAGGATCATCAAGTTCTTGTTCAAAGCCTAATAGTGGAAATAATGGAAATGGAAATAATTTGTTGGAAAAAAAAGTAAGAGGTGAAAAGGAGCAAGCTTTGAAGTGTCCGAGATGTAATTCGAGTAACACAAAGTTCTGTTATTACAACAATTACAGCCTGTCGCAGCCAAGGTATTTTTGTAAGGCTTGTCGGAGGTATTGGACTGAAGGTGGTTCTTTAAGGAATGTTCCAGTAGGTGGCGGCTCAAGGAAGAACAAAAGATCTTCACTTTCTTCTTCTTCTTCTTCTTCTGATCATAATAAGAAAATCAACGCATCTCATCAAATCATCAATCATCAAGATCTCAATCTTGCAATCTTCCCTCCAAACAACAACAACAACAATACTTCTATCTCCACTTCATCTTCTTCTTCTTCTCATCTTTTGGCTTCTTTCATGACGGCACCGGCAACAGGAATGTTCAATGGCAGTGGTGGGTTTGGATTGAACGAGTTGAAGCCACCTGCAAGCTTAAGTTTTTCTTTGGAAGGGTTTGATCAGAATGGAGTAAGAGGGTACGGGGATCTTCATCATCACCATCATCAAGATCAGACGGCTGTGATGTTTCCAATTGAAGATATGAAGCAAAGTAATGATCATGAGGAGAATAGGGGAGGACATGGAGGGGATAATAACAACAATAATAATAGTAATAATTCAGGTGGTAGTACTGGATTTTGGAATGGAATGTTGGGAGGTGGATCGTGGTAATATTTTTATTTTTCACTTTTAAATACAAATGTTCACGTTGCTAGAAAAAGAAAGATGAAGAAAATGGTGTGTGCTTTTTTCTTTTCTTTACTTCATAGTTTGGTGTTGGTGGGGTGATTTTGTTTGTGGGGTTTTGATGGAAAAAAAAACTAACAATAGGGTTTTTGTTTTTCCTCTCTTATGTTTCCTTTTTGTGTGTGTGTGTGTGTGTGTGTAATCTTTTTATTATATAGAGGATTTGGATGGTTTTGAAGCTTTGTTTTCAGGTCAGCTTCAAATGAATTGACATTTGAAATTCAGTGGAAAATATATCACACACAGATATATATGTTGTACGTTGTTGTGTTACAAAACAAATATCAGAGAGAGCTCATTGATTCCTATTGTAGAGCTTAAATATTTCATGATTATTATCTTTTTTGTATCTCATCTTTTAATTATATTGTTGGGTTTTGACTTGTTTTTCCATTTGTTTTGTTGATGTATAATGTTTATATATATTGAAGTATGGTTTAGGGATTAGAATGGAGTTATGATGAACAGCCTGCAAATTGCAGCTTGCTTGGCTACAGCTACAAACACTACTACTACACTACAACAACAACAACTACCTTTGTTTATTATTATTTTTATTTGAGAAAAACTGAGATTTGTGTGATTAATTAAACATAATTTATTTGTTAGAAGAGGAGTGAGAGAGTGAGGTGGCTGCCAATCCCTTTTAACAGCAAAAGTTAGTGTGTGTTTGGTTGCCAAAATGCAAATGCCAATTGCCCAACAGCTCACAAATGTCAGTGTCTTTTCAGCAAAACCCCATCTGAAGTAATTCTTTATGATCGAACACTTCCATCCATTAAAAAGCTAAGCCCTACGGGAATCCCAATAAATTAAAACCCCTCTCTTCTCTTCATTTCATGTTAGCATAGCCTTAGCTACATTCCCAACAAGGAAAAGGGGAATAATCAATCAAACCATTGTATATCATTCAATTACTCTATAGTCTTTTACTTGCATAGAAATATAGAGAACAACATTAAGGTCCCATTGAA

mRNA sequence

ATGGACACTGCTCATTGGCCACAGTTTGCAGGTGGTGGTGGAATGGTTGTTAAACAAATGGAAGGGGGAGGAGGAGGAGGAGGATCATCAAGTTCTTGTTCAAAGCCTAATAGTGGAAATAATGGAAATGGAAATAATTTGTTGGAAAAAAAAGTAAGAGGTGAAAAGGAGCAAGCTTTGAAGTGTCCGAGATGTAATTCGAGTAACACAAAGTTCTGTTATTACAACAATTACAGCCTGTCGCAGCCAAGGTATTTTTGTAAGGCTTGTCGGAGGTATTGGACTGAAGGTGGTTCTTTAAGGAATGTTCCAGTAGGTGGCGGCTCAAGGAAGAACAAAAGATCTTCACTTTCTTCTTCTTCTTCTTCTTCTGATCATAATAAGAAAATCAACGCATCTCATCAAATCATCAATCATCAAGATCTCAATCTTGCAATCTTCCCTCCAAACAACAACAACAACAATACTTCTATCTCCACTTCATCTTCTTCTTCTTCTCATCTTTTGGCTTCTTTCATGACGGCACCGGCAACAGGAATGTTCAATGGCAGTGGTGGGTTTGGATTGAACGAGTTGAAGCCACCTGCAAGCTTAAGTTTTTCTTTGGAAGGGTTTGATCAGAATGGAGTAAGAGGGTACGGGGATCTTCATCATCACCATCATCAAGATCAGACGGCTGTGATGTTTCCAATTGAAGATATGAAGCAAAGTAATGATCATGAGGAGAATAGGGGAGGACATGGAGGGGATAATAACAACAATAATAATAGTAATAATTCAGGTGGTAGTACTGGATTTTGGAATGGAATGTTGGGAGGTGGATCGTGGTAA

Coding sequence (CDS)

ATGGACACTGCTCATTGGCCACAGTTTGCAGGTGGTGGTGGAATGGTTGTTAAACAAATGGAAGGGGGAGGAGGAGGAGGAGGATCATCAAGTTCTTGTTCAAAGCCTAATAGTGGAAATAATGGAAATGGAAATAATTTGTTGGAAAAAAAAGTAAGAGGTGAAAAGGAGCAAGCTTTGAAGTGTCCGAGATGTAATTCGAGTAACACAAAGTTCTGTTATTACAACAATTACAGCCTGTCGCAGCCAAGGTATTTTTGTAAGGCTTGTCGGAGGTATTGGACTGAAGGTGGTTCTTTAAGGAATGTTCCAGTAGGTGGCGGCTCAAGGAAGAACAAAAGATCTTCACTTTCTTCTTCTTCTTCTTCTTCTGATCATAATAAGAAAATCAACGCATCTCATCAAATCATCAATCATCAAGATCTCAATCTTGCAATCTTCCCTCCAAACAACAACAACAACAATACTTCTATCTCCACTTCATCTTCTTCTTCTTCTCATCTTTTGGCTTCTTTCATGACGGCACCGGCAACAGGAATGTTCAATGGCAGTGGTGGGTTTGGATTGAACGAGTTGAAGCCACCTGCAAGCTTAAGTTTTTCTTTGGAAGGGTTTGATCAGAATGGAGTAAGAGGGTACGGGGATCTTCATCATCACCATCATCAAGATCAGACGGCTGTGATGTTTCCAATTGAAGATATGAAGCAAAGTAATGATCATGAGGAGAATAGGGGAGGACATGGAGGGGATAATAACAACAATAATAATAGTAATAATTCAGGTGGTAGTACTGGATTTTGGAATGGAATGTTGGGAGGTGGATCGTGGTAA

Protein sequence

MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSSSSDHNKKINASHQIINHQDLNLAIFPPNNNNNNTSISTSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDHEENRGGHGGDNNNNNNSNNSGGSTGFWNGMLGGGSW*

Homology

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BLAST of CsaV3_5G000300 vs. NCBI nr
Match: XP_004145942.2 (dof zinc finger protein DOF2.5 [Cucumis sativus] >KGN49563.2 hypothetical protein Csa_000639 [Cucumis sativus])

HSP 1 Score: 539.3 bits (1388), Expect = 2.0e-149
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQAL 60
           MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQAL
Sbjct: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQAL 60

Query: 61  KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS 120
           KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS
Sbjct: 61  KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS 120

Query: 121 SSSSDHNKKINASHQIINHQDLNLAIFPPNNNNNNTSISTSSSSSSHLLASFMTAPATGM 180
           SSSSDHNKKINASHQIINHQDLNLAIFPPNNNNNNTSISTSSSSSSHLLASFMTAPATGM
Sbjct: 121 SSSSDHNKKINASHQIINHQDLNLAIFPPNNNNNNTSISTSSSSSSHLLASFMTAPATGM 180

Query: 181 FNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDH 240
           FNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDH
Sbjct: 181 FNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDH 240

Query: 241 EENRGGHGGDNNNNNNSNNSGGSTGFWNGMLGGGSW 277
           EENRGGHGGDNNNNNNSNNSGGSTGFWNGMLGGGSW
Sbjct: 241 EENRGGHGGDNNNNNNSNNSGGSTGFWNGMLGGGSW 276

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BLAST of CsaV3_5G000300 vs. NCBI nr
Match: XP_008437630.1 (PREDICTED: dof zinc finger protein DOF4.6-like [Cucumis melo])

HSP 1 Score: 493.8 bits (1270), Expect = 9.6e-136
Identity = 264/279 (94.62%), Postives = 268/279 (96.06%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQAL 60
           MDTAHWPQFAGGGG+VVKQME   GGGGSSSSCSKPNSG NGNGNNLLE+KVRGEKEQAL
Sbjct: 1   MDTAHWPQFAGGGGVVVKQME---GGGGSSSSCSKPNSG-NGNGNNLLERKVRGEKEQAL 60

Query: 61  KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS 120
           KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS
Sbjct: 61  KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS 120

Query: 121 SSSSDHNKKINASHQIINHQDLNLAIFPP--NNNNNNTSISTSSSSSSHLLASFMTAPAT 180
           S+SSDHNKKINASHQIINHQDLNLAIFPP  NNNNNNTSIST SSSSSHLLASFMTAPAT
Sbjct: 121 STSSDHNKKINASHQIINHQDLNLAIFPPNNNNNNNNTSIST-SSSSSHLLASFMTAPAT 180

Query: 181 GMFNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSN 240
           GMFN SGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSN
Sbjct: 181 GMFNSSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSN 240

Query: 241 DHEENRGGHGGDNNNNNNS-NNSGGSTGFWNGMLGGGSW 277
           DHE+NRGG GGDNNNN NS NNSGGSTGFWNGMLGGGSW
Sbjct: 241 DHEDNRGGLGGDNNNNTNSNNNSGGSTGFWNGMLGGGSW 274

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BLAST of CsaV3_5G000300 vs. NCBI nr
Match: KAA0042533.1 (dof zinc finger protein DOF4.6-like [Cucumis melo var. makuwa] >TYK05936.1 dof zinc finger protein DOF4.6-like [Cucumis melo var. makuwa])

HSP 1 Score: 449.9 bits (1156), Expect = 1.6e-122
Identity = 243/255 (95.29%), Postives = 246/255 (96.47%), Query Frame = 0


Query: 25  GGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPR 84
           GGGGSSSSCSKPNSG NGNGNNLLE+KVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPR
Sbjct: 3   GGGGSSSSCSKPNSG-NGNGNNLLERKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPR 62

Query: 85  YFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSSSSDHNKKINASHQIINHQDLNL 144
           YFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSS+SSDHNKKINASHQIINHQDLNL
Sbjct: 63  YFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSTSSDHNKKINASHQIINHQDLNL 122

Query: 145 AIFPPNNNN--NNTSISTSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKPPASLSFSL 204
           AIFPPNNNN  NNTSIST SSSSSHLLASFMTAPATGMFN SGGFGLNELKPPASLSFSL
Sbjct: 123 AIFPPNNNNNTNNTSIST-SSSSSHLLASFMTAPATGMFNSSGGFGLNELKPPASLSFSL 182

Query: 205 EGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDHEENRGGHGGDNNNNNNS-NNSG 264
           EGFDQNGVRGYGD HHHHHQDQTAVMFPIEDMKQSNDHE+NRGG GGDNNNN NS NNSG
Sbjct: 183 EGFDQNGVRGYGD-HHHHHQDQTAVMFPIEDMKQSNDHEDNRGGLGGDNNNNTNSNNNSG 242

Query: 265 GSTGFWNGMLGGGSW 277
           GSTGFWNGMLGGGSW
Sbjct: 243 GSTGFWNGMLGGGSW 254

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BLAST of CsaV3_5G000300 vs. NCBI nr
Match: XP_038906804.1 (dof zinc finger protein DOF4.6-like [Benincasa hispida])

HSP 1 Score: 341.7 bits (875), Expect = 6.1e-90
Identity = 210/297 (70.71%), Postives = 228/297 (76.77%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKPNSGNNGNGN------NLLEKKVRG 60
           MDTAHWPQFA GGG+VVKQMEGGG     SSS SKPN+ NN N N      NLLE+K R 
Sbjct: 1   MDTAHWPQFA-GGGVVVKQMEGGG-----SSSSSKPNNNNNNNNNNNNNNGNLLERKARP 60

Query: 61  EKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKR 120
           +KEQAL CPRCNS+NTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKR
Sbjct: 61  QKEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKR 120

Query: 121 SSLSSSSSSS--DHNKKINASHQ---IIN---HQDLNLAIFPPNNNNNNTSISTSSSSSS 180
           SS  SSSSS+  DHNKKINAS Q   +I+   HQDLNLAIFPP   +NN  I +SSS+SS
Sbjct: 121 SSSLSSSSSAPLDHNKKINASDQNPKMIHHHAHQDLNLAIFPP--TSNNPPIPSSSSTSS 180

Query: 181 HLLASFMT--APATGMFNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGD-----LHHH 240
           HLL SFMT  APA G+FN  GGFGLNELKPP +LSFSLEGF+  G  GYGD      HHH
Sbjct: 181 HLLGSFMTMAAPAPGVFNAGGGFGLNELKPP-TLSFSLEGFENGG--GYGDHHHHHHHHH 240

Query: 241 HHQDQTAVMFPIEDMKQSNDHEENRGGHGGDNNNNNNSNNSGGSTGFWNGMLGGGSW 277
           HHQDQTAVMFPIE++KQSN       G   D N   ++NNSGG  GFWNGMLGGGSW
Sbjct: 241 HHQDQTAVMFPIEELKQSNGR-----GEFEDQNRGGDNNNSGG--GFWNGMLGGGSW 279

[Close]

BLAST of CsaV3_5G000300 vs. NCBI nr
Match: KAG7016811.1 (Dof zinc finger protein DOF4.6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.1 bits (806), Expect = 6.1e-82
Identity = 197/304 (64.80%), Postives = 221/304 (72.70%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKP----------NSGNNGNGNNLLEK 60
           MDT  WPQFA GGG+VVKQME     GG SSS SK           N  NN N  NLLE+
Sbjct: 1   MDTPPWPQFA-GGGVVVKQME-----GGESSSSSKAGNININNVNININNNNNNGNLLER 60

Query: 61  KVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSR 120
           K R +KEQAL CPRCNS+NTKFCYYNNYSLSQPRYFCK+CRRYWTEGGSLRNVPVGGGSR
Sbjct: 61  KARPQKEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKSCRRYWTEGGSLRNVPVGGGSR 120

Query: 121 KNKRSSLSSSSSSSDHNKKINASHQ---IIN--HQDLNLAIFPPNNNNNNTSISTSSSSS 180
           KNKRSSLS+       +KKIN S Q   +I+  HQDLNLAIFPPNNNN  +S S+S++SS
Sbjct: 121 KNKRSSLSAPV-----DKKINGSDQNPKMIHHAHQDLNLAIFPPNNNNPISS-SSSTTSS 180

Query: 181 SHLLASFMTAP-----ATGMFNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHH 240
           SHL  SFM  P     A G+FNG+GGFG NELK P+SLSFSL+GF+  G  GYG+ HHHH
Sbjct: 181 SHLFGSFMAPPPPPAAAAGVFNGAGGFGFNELK-PSSLSFSLDGFESGG--GYGNHHHHH 240

Query: 241 ---HQDQTAVMFPIEDMKQSN---DHEENRGG--HGGDNNNNNNSNNSGGSTGFWNGMLG 277
              HQDQTAVMFPI+D+KQSN   + E+NRGG  HGGDN+          S GFWNGMLG
Sbjct: 241 HQDHQDQTAVMFPIQDLKQSNGSDEFEQNRGGGRHGGDNS----------SGGFWNGMLG 279

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 3.2e-33
Identity = 133/371 (35.85%), Postives = 170/371 (45.82%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSK-------PNSGNNGNGNNLLEKKVR 60
           MDTA WPQ      +VVK +E        +++C K       P    +  G    E+K R
Sbjct: 1   MDTAQWPQ-----EIVVKPLE-----EIVTNTCPKPQPQPLQPQQPPSVGG----ERKAR 60

Query: 61  GEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNK 120
            EK+QA+ CPRCNS+NTKFCYYNNYSL+QPRYFCK CRRYWTEGGSLRN+PVGGGSRKNK
Sbjct: 61  PEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNK 120

Query: 121 RSSLSSSSSSSDHN--------KKINASHQII------------------NHQDLNLAIF 180
           RS  SSS  S++H+        K ++  H  +                    QDLNL   
Sbjct: 121 RSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFS 180

Query: 181 P--------------------PNNNNNN----TSISTSSSSSSHLL-----------ASF 240
           P                     +NNNNN    +S S  ++SS  L+           +SF
Sbjct: 181 PHGMIRTNFTDLIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSF 240

Query: 241 MTAPATGMFNGSGGFGLNELKPPAS-----LSFSLEGFDQNGVRG----------YGDLH 277
           M  P       SGGF + +   P +     L FSL+    NG  G           GD  
Sbjct: 241 MGFPVHNQDPASGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGGEEGGEGGDDV 300

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy Swiss-Prot
Match: Q9ZPY0 (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 128/325 (39.38%), Postives = 159/325 (48.92%), Query Frame = 0


Query: 28  GSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFC 87
           G S++ +  +  +N N N  +  + +   ++ L CPRCNS+NTKFCYYNNYSL+QPRYFC
Sbjct: 48  GVSTAGATVSGVSNNNNNTAVVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFC 107

Query: 88  KACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS--------SSSSDHNKKINASHQIIN- 147
           K CRRYWTEGGSLRNVPVGG SRKNKRSS SSS        SS  D N  I  S+QI N 
Sbjct: 108 KGCRRYWTEGGSLRNVPVGGSSRKNKRSSSSSSSNILQTIPSSLPDLNPPILFSNQIHNK 167

Query: 148 ----HQDLNLAIFP---------------------PNNNNNNTSISTSSSSS-------- 207
                QDLNL  FP                       N N       SSSSS        
Sbjct: 168 SKGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKMEGNGNITHQQQPSSSSSVYGSSSSP 227

Query: 208 ----------------SHLLASFMTAPATGMFNG------SGGFGLNELKPPASLSFSL- 267
                           S + +SFM  P+  M +       S GF       P++LSFS  
Sbjct: 228 VSALELLRTGVNVSSRSGINSSFM--PSGSMMDSNTVLYTSSGFPTMVDYKPSNLSFSTD 287

Query: 268 -EGFDQNGVRGYGDLHHHHHQDQTAVMFPIED--------MKQSNDHEEN--RGGHGGDN 277
            +G   N       LH  HHQ Q  V+FP  D        + Q  DH++N  +  HG +N
Sbjct: 288 HQGLGHNSNNRSEALHSDHHQ-QGRVLFPFGDQMKELSSSITQEVDHDDNQQQKSHGNNN 347

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28
Identity = 102/225 (45.33%), Postives = 120/225 (53.33%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQAL 60
           MDTA WPQ       VVK M         +++C K  S N  +    +E+K R EK+QAL
Sbjct: 1   MDTAKWPQ-----EFVVKPM-----NEIVTNTCLKQQS-NPPSPATPVERKARPEKDQAL 60

Query: 61  KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS 120
            CPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGGG RKNKRSS +SS
Sbjct: 61  NCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSS 120

Query: 121 S---SSSDHNKKINASHQIINHQDLNLAIFPPNNNNNNTSISTSSSSSSHLLASFMTAPA 180
           S   SSS  +KK                   P   NNN    T +    HL      A A
Sbjct: 121 SSSPSSSSSSKK-------------------PLFANNN----TPTPPLPHLNPKIGEAAA 180

Query: 181 TGM--FNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHH 221
           T +     S GFG        +L+FS         +G+G  H+HH
Sbjct: 181 TKVQDLTFSQGFGNAHEVKDLNLAFS---------QGFGIGHNHH 182

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy Swiss-Prot
Match: Q43385 (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 102/262 (38.93%), Postives = 138/262 (52.67%), Query Frame = 0


Query: 37  NSGNNGNGNNLLEKKVR-GEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWT 96
           N G+ GN NN    + R    ++ + CPRCNS+NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 50  NGGSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 109

Query: 97  EGGSLRNVPVGGGSRKNKRSSLSSSSSSS----DHNKKINASHQIIN--HQDLNLAIFPP 156
           EGGSLRNVPVGG SRKNKRSS   +S S+    D N  I  S QI N  ++DLNL  FP 
Sbjct: 110 EGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPV 169

Query: 157 NNNNNNTSI------STSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKPP-ASLSFSL 216
             ++++ ++        SS   +  L   M    + +++  G   + + K    +LSFS+
Sbjct: 170 MQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSI 229

Query: 217 ---EGFDQNGVRGYGDLHHHHHQDQTA--VMFPIEDMKQSNDHEENRGGHGGDNNNNNNS 276
              +G   N +        ++     A  V+FP  DMK+                ++   
Sbjct: 230 DHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKEL---------------SSTTQ 289

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.5e-27
Identity = 122/337 (36.20%), Postives = 162/337 (48.07%), Query Frame = 0


Query: 20  MEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCYYNNYS 79
           + GGGGGG      + P +G  G G+   E++ R +KE+AL CPRCNS+NTKFCYYNNYS
Sbjct: 46  LRGGGGGG------APPVAGGAGAGST--ERRARPQKEKALNCPRCNSTNTKFCYYNNYS 105

Query: 80  LSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSS----SSSDHNKKINASHQ 139
           L QPRYFCK CRRYWTEGGSLRNVPVGGGSRKNKRSS S++S    S+S  N  + ++  
Sbjct: 106 LQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASM 165

Query: 140 IIN------------------HQDLNLAI-----------FPPNNNNNNTSIST------ 199
            ++                   QDLNLA            FP   +  ++S+        
Sbjct: 166 SMSMASTGGGASKNPKLVHEGAQDLNLAFPHHGGLQAPGEFPAFPSLESSSVCNPGGPMG 225

Query: 200 SSSSSSHLLASFMTAPATGMF------------NGSGGFGLNELK---PPASLSFSLEGF 259
           ++      L++     +TG +              + GF L E +   PP   S SL GF
Sbjct: 226 TNGRGGGALSAMELLRSTGCYMPLQVPMQMPAEYATPGFALGEFRAPPPPPQSSQSLLGF 285

Query: 260 --DQNG------VRGYGDLHHHHHQDQTA--VMFPIEDMK-----------QSNDHEENR 276
             D +G        G+G         ++   ++FP ED+K            S       
Sbjct: 286 SLDAHGSVGGPSAAGFGSSAGLQGVPESTGRLLFPFEDLKPTVSSGTGGGGASGGGAGVD 345

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy TrEMBL
Match: A0A0A0KJS3 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139210 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.4e-140
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 15  MVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCY 74
           MVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCY
Sbjct: 1   MVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCY 60

Query: 75  YNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSSSSDHNKKINASH 134
           YNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSSSSDHNKKINASH
Sbjct: 61  YNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSSSSDHNKKINASH 120

Query: 135 QIINHQDLNLAIFPPNNNNNNTSISTSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKP 194
           QIINHQDLNLAIFPPNNNNNNTSISTSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKP
Sbjct: 121 QIINHQDLNLAIFPPNNNNNNTSISTSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKP 180

Query: 195 PASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDHEENRGGHGGDNNNN 254
           PASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDHEENRGGHGGDNNNN
Sbjct: 181 PASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDHEENRGGHGGDNNNN 240

Query: 255 NNSNNSGGSTGFWNGMLGGGSW 277
           NNSNNSGGSTGFWNGMLGGGSW
Sbjct: 241 NNSNNSGGSTGFWNGMLGGGSW 262

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy TrEMBL
Match: A0A1S3AV39 (dof zinc finger protein DOF4.6-like OS=Cucumis melo OX=3656 GN=LOC103482981 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.6e-136
Identity = 264/279 (94.62%), Postives = 268/279 (96.06%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQAL 60
           MDTAHWPQFAGGGG+VVKQME   GGGGSSSSCSKPNSG NGNGNNLLE+KVRGEKEQAL
Sbjct: 1   MDTAHWPQFAGGGGVVVKQME---GGGGSSSSCSKPNSG-NGNGNNLLERKVRGEKEQAL 60

Query: 61  KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS 120
           KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS
Sbjct: 61  KCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS 120

Query: 121 SSSSDHNKKINASHQIINHQDLNLAIFPP--NNNNNNTSISTSSSSSSHLLASFMTAPAT 180
           S+SSDHNKKINASHQIINHQDLNLAIFPP  NNNNNNTSIST SSSSSHLLASFMTAPAT
Sbjct: 121 STSSDHNKKINASHQIINHQDLNLAIFPPNNNNNNNNTSIST-SSSSSHLLASFMTAPAT 180

Query: 181 GMFNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSN 240
           GMFN SGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSN
Sbjct: 181 GMFNSSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSN 240

Query: 241 DHEENRGGHGGDNNNNNNS-NNSGGSTGFWNGMLGGGSW 277
           DHE+NRGG GGDNNNN NS NNSGGSTGFWNGMLGGGSW
Sbjct: 241 DHEDNRGGLGGDNNNNTNSNNNSGGSTGFWNGMLGGGSW 274

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy TrEMBL
Match: A0A5D3C6H0 (Dof zinc finger protein DOF4.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00290 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 7.7e-123
Identity = 243/255 (95.29%), Postives = 246/255 (96.47%), Query Frame = 0


Query: 25  GGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPR 84
           GGGGSSSSCSKPNSG NGNGNNLLE+KVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPR
Sbjct: 3   GGGGSSSSCSKPNSG-NGNGNNLLERKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPR 62

Query: 85  YFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSSSSDHNKKINASHQIINHQDLNL 144
           YFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSS+SSDHNKKINASHQIINHQDLNL
Sbjct: 63  YFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSTSSDHNKKINASHQIINHQDLNL 122

Query: 145 AIFPPNNNN--NNTSISTSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKPPASLSFSL 204
           AIFPPNNNN  NNTSIST SSSSSHLLASFMTAPATGMFN SGGFGLNELKPPASLSFSL
Sbjct: 123 AIFPPNNNNNTNNTSIST-SSSSSHLLASFMTAPATGMFNSSGGFGLNELKPPASLSFSL 182

Query: 205 EGFDQNGVRGYGDLHHHHHQDQTAVMFPIEDMKQSNDHEENRGGHGGDNNNNNNS-NNSG 264
           EGFDQNGVRGYGD HHHHHQDQTAVMFPIEDMKQSNDHE+NRGG GGDNNNN NS NNSG
Sbjct: 183 EGFDQNGVRGYGD-HHHHHQDQTAVMFPIEDMKQSNDHEDNRGGLGGDNNNNTNSNNNSG 242

Query: 265 GSTGFWNGMLGGGSW 277
           GSTGFWNGMLGGGSW
Sbjct: 243 GSTGFWNGMLGGGSW 254

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy TrEMBL
Match: A0A6J1E6H2 (dof zinc finger protein DOF4.6-like OS=Cucurbita moschata OX=3662 GN=LOC111430405 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 3.3e-81
Identity = 196/305 (64.26%), Postives = 220/305 (72.13%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSKP----------NSGNNGNGNNLLEK 60
           MDT  WPQFA GGG+VVKQME     GG SSS SK           N  NN N  NLLE+
Sbjct: 1   MDTPPWPQFA-GGGVVVKQME-----GGESSSSSKAGNININNVNININNNNNNGNLLER 60

Query: 61  KVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSR 120
           K R +KEQAL CPRCNS+NTKFCYYNNYSLSQPRYFCK+CRRYWTEGGSLRNVPVGGGSR
Sbjct: 61  KARPQKEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKSCRRYWTEGGSLRNVPVGGGSR 120

Query: 121 KNKRSSLSSSSSSSDHNKKINASHQ---IIN--HQDLNLAIFPPNNNNNNTSISTSSSSS 180
           KNKRSSLS+       +KKIN S Q   +I+  HQDLNLAIFPPNNNN  +S S+S++SS
Sbjct: 121 KNKRSSLSAPV-----DKKINGSDQNPKMIHHAHQDLNLAIFPPNNNNPISS-SSSTTSS 180

Query: 181 SHLLASFMTAP-----ATGMFNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHH 240
           SHL  SFM  P     A G+FNG+GGFG NELK P+SLSFSL+GF+  G  GYG+ HHH 
Sbjct: 181 SHLFGSFMAPPPPPAAAAGVFNGAGGFGFNELK-PSSLSFSLDGFESGG--GYGNHHHHQ 240

Query: 241 ----HQDQTAVMFPIEDMKQSN---DHEENRGG--HGGDNNNNNNSNNSGGSTGFWNGML 277
               HQDQTAVMFPI+D+KQSN   + E+NRGG  HGGDN+          S GFWNGML
Sbjct: 241 DHQDHQDQTAVMFPIQDLKQSNGSDEFEQNRGGGRHGGDNS----------SGGFWNGML 280

[Close]

BLAST of CsaV3_5G000300 vs. ExPASy TrEMBL
Match: A0A6J1I6C6 (dof zinc finger protein DOF2.5-like OS=Cucurbita maxima OX=3661 GN=LOC111471525 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 5.2e-79
Identity = 192/298 (64.43%), Postives = 217/298 (72.82%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGG-----GGGGGSSSSCSKPNSGNNGNGNNLLEKKVRGE 60
           MDT  WPQFA GGG+VVKQMEGG       GG  + +    N  NN N  NLLE+K R +
Sbjct: 1   MDTPPWPQFA-GGGVVVKQMEGGESSSSSKGGNININNVNININNNNNNGNLLERKARPQ 60

Query: 61  KEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRS 120
           KEQAL CPRCNS+NTKFCYYNNYSLSQPRYFCK+CRRYWTEGGSLRNVPVGGGSRKNKRS
Sbjct: 61  KEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKSCRRYWTEGGSLRNVPVGGGSRKNKRS 120

Query: 121 SLSSSSSSSDHNKKINASHQ---IIN--HQDLNLAIFPPNNNNNNTSISTSSSSSSHLLA 180
           SLS+       +KKIN S Q   +I+  HQDLNLAIFPPNNNN  +S S+S+SSSSHL  
Sbjct: 121 SLSAPV-----DKKINGSDQNPKMIHHAHQDLNLAIFPPNNNNPISS-SSSTSSSSHLFG 180

Query: 181 SFMTAP-----ATGMFNGSGGFGLNELKPPASLSFSLEGFDQNGVRGYGDLHHHH--HQD 240
           SFM  P     A G+FN +GGFG NELK P+SLSFSL+GF+     GYG+ HHHH  HQD
Sbjct: 181 SFMAPPPPPAAAAGVFNVAGGFGFNELK-PSSLSFSLDGFESGS--GYGNHHHHHQDHQD 240

Query: 241 QTAVMFPIEDMKQSN---DHEENRGG--HGGDNNNNNNSNNSGGSTGFWNGMLGGGSW 277
           QTAVMFPI+D+KQSN   + E+NRGG  HGGDN+          S GFWNGML GGSW
Sbjct: 241 QTAVMFPIQDLKQSNGSDEFEQNRGGGRHGGDNS----------SGGFWNGMLDGGSW 278

[Close]

BLAST of CsaV3_5G000300 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 143.7 bits (361), Expect = 2.3e-34
Identity = 133/371 (35.85%), Postives = 170/371 (45.82%), Query Frame = 0


Query: 1   MDTAHWPQFAGGGGMVVKQMEGGGGGGGSSSSCSK-------PNSGNNGNGNNLLEKKVR 60
           MDTA WPQ      +VVK +E        +++C K       P    +  G    E+K R
Sbjct: 1   MDTAQWPQ-----EIVVKPLE-----EIVTNTCPKPQPQPLQPQQPPSVGG----ERKAR 60

Query: 61  GEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNK 120
            EK+QA+ CPRCNS+NTKFCYYNNYSL+QPRYFCK CRRYWTEGGSLRN+PVGGGSRKNK
Sbjct: 61  PEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNK 120

Query: 121 RSSLSSSSSSSDHN--------KKINASHQII------------------NHQDLNLAIF 180
           RS  SSS  S++H+        K ++  H  +                    QDLNL   
Sbjct: 121 RSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFS 180

Query: 181 P--------------------PNNNNNN----TSISTSSSSSSHLL-----------ASF 240
           P                     +NNNNN    +S S  ++SS  L+           +SF
Sbjct: 181 PHGMIRTNFTDLIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSF 240

Query: 241 MTAPATGMFNGSGGFGLNELKPPAS-----LSFSLEGFDQNGVRG----------YGDLH 277
           M  P       SGGF + +   P +     L FSL+    NG  G           GD  
Sbjct: 241 MGFPVHNQDPASGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGGEEGGEGGDDV 300

[Close]

BLAST of CsaV3_5G000300 vs. TAIR 10
Match: AT2G46590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 138.3 bits (347), Expect = 9.5e-33
Identity = 128/325 (39.38%), Postives = 159/325 (48.92%), Query Frame = 0


Query: 28  GSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFC 87
           G S++ +  +  +N N N  +  + +   ++ L CPRCNS+NTKFCYYNNYSL+QPRYFC
Sbjct: 36  GVSTAGATVSGVSNNNNNTAVVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFC 95

Query: 88  KACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS--------SSSSDHNKKINASHQIIN- 147
           K CRRYWTEGGSLRNVPVGG SRKNKRSS SSS        SS  D N  I  S+QI N 
Sbjct: 96  KGCRRYWTEGGSLRNVPVGGSSRKNKRSSSSSSSNILQTIPSSLPDLNPPILFSNQIHNK 155

Query: 148 ----HQDLNLAIFP---------------------PNNNNNNTSISTSSSSS-------- 207
                QDLNL  FP                       N N       SSSSS        
Sbjct: 156 SKGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKMEGNGNITHQQQPSSSSSVYGSSSSP 215

Query: 208 ----------------SHLLASFMTAPATGMFNG------SGGFGLNELKPPASLSFSL- 267
                           S + +SFM  P+  M +       S GF       P++LSFS  
Sbjct: 216 VSALELLRTGVNVSSRSGINSSFM--PSGSMMDSNTVLYTSSGFPTMVDYKPSNLSFSTD 275

Query: 268 -EGFDQNGVRGYGDLHHHHHQDQTAVMFPIED--------MKQSNDHEEN--RGGHGGDN 277
            +G   N       LH  HHQ Q  V+FP  D        + Q  DH++N  +  HG +N
Sbjct: 276 HQGLGHNSNNRSEALHSDHHQ-QGRVLFPFGDQMKELSSSITQEVDHDDNQQQKSHGNNN 335

[Close]

BLAST of CsaV3_5G000300 vs. TAIR 10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 138.3 bits (347), Expect = 9.5e-33
Identity = 128/325 (39.38%), Postives = 159/325 (48.92%), Query Frame = 0


Query: 28  GSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFC 87
           G S++ +  +  +N N N  +  + +   ++ L CPRCNS+NTKFCYYNNYSL+QPRYFC
Sbjct: 48  GVSTAGATVSGVSNNNNNTAVVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFC 107

Query: 88  KACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSS--------SSSSDHNKKINASHQIIN- 147
           K CRRYWTEGGSLRNVPVGG SRKNKRSS SSS        SS  D N  I  S+QI N 
Sbjct: 108 KGCRRYWTEGGSLRNVPVGGSSRKNKRSSSSSSSNILQTIPSSLPDLNPPILFSNQIHNK 167

Query: 148 ----HQDLNLAIFP---------------------PNNNNNNTSISTSSSSS-------- 207
                QDLNL  FP                       N N       SSSSS        
Sbjct: 168 SKGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKMEGNGNITHQQQPSSSSSVYGSSSSP 227

Query: 208 ----------------SHLLASFMTAPATGMFNG------SGGFGLNELKPPASLSFSL- 267
                           S + +SFM  P+  M +       S GF       P++LSFS  
Sbjct: 228 VSALELLRTGVNVSSRSGINSSFM--PSGSMMDSNTVLYTSSGFPTMVDYKPSNLSFSTD 287

Query: 268 -EGFDQNGVRGYGDLHHHHHQDQTAVMFPIED--------MKQSNDHEEN--RGGHGGDN 277
            +G   N       LH  HHQ Q  V+FP  D        + Q  DH++N  +  HG +N
Sbjct: 288 HQGLGHNSNNRSEALHSDHHQ-QGRVLFPFGDQMKELSSSITQEVDHDDNQQQKSHGNNN 347

[Close]

BLAST of CsaV3_5G000300 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-29
Identity = 102/262 (38.93%), Postives = 138/262 (52.67%), Query Frame = 0


Query: 37  NSGNNGNGNNLLEKKVR-GEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWT 96
           N G+ GN NN    + R    ++ + CPRCNS+NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 50  NGGSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 109

Query: 97  EGGSLRNVPVGGGSRKNKRSSLSSSSSSS----DHNKKINASHQIIN--HQDLNLAIFPP 156
           EGGSLRNVPVGG SRKNKRSS   +S S+    D N  I  S QI N  ++DLNL  FP 
Sbjct: 110 EGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPV 169

Query: 157 NNNNNNTSI------STSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKPP-ASLSFSL 216
             ++++ ++        SS   +  L   M    + +++  G   + + K    +LSFS+
Sbjct: 170 MQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSI 229

Query: 217 ---EGFDQNGVRGYGDLHHHHHQDQTA--VMFPIEDMKQSNDHEENRGGHGGDNNNNNNS 276
              +G   N +        ++     A  V+FP  DMK+                ++   
Sbjct: 230 DHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKEL---------------SSTTQ 289

[Close]

BLAST of CsaV3_5G000300 vs. TAIR 10
Match: AT3G61850.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-29
Identity = 102/262 (38.93%), Postives = 138/262 (52.67%), Query Frame = 0


Query: 37  NSGNNGNGNNLLEKKVR-GEKEQALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWT 96
           N G+ GN NN    + R    ++ + CPRCNS+NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 38  NGGSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 97

Query: 97  EGGSLRNVPVGGGSRKNKRSSLSSSSSSS----DHNKKINASHQIIN--HQDLNLAIFPP 156
           EGGSLRNVPVGG SRKNKRSS   +S S+    D N  I  S QI N  ++DLNL  FP 
Sbjct: 98  EGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPV 157

Query: 157 NNNNNNTSI------STSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKPP-ASLSFSL 216
             ++++ ++        SS   +  L   M    + +++  G   + + K    +LSFS+
Sbjct: 158 MQDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSI 217

Query: 217 ---EGFDQNGVRGYGDLHHHHHQDQTA--VMFPIEDMKQSNDHEENRGGHGGDNNNNNNS 276
              +G   N +        ++     A  V+FP  DMK+                ++   
Sbjct: 218 DHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKEL---------------SSTTQ 277

The following BLAST results are available for this feature:

BLAST of CsaV3_5G000300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145942.2	2.0e-149	100.00	dof zinc finger protein DOF2.5 [Cucumis sativus] >KGN49563.2 hypothetical protei...	[more]
XP_008437630.1	9.6e-136	94.62	PREDICTED: dof zinc finger protein DOF4.6-like [Cucumis melo]	[more]
KAA0042533.1	1.6e-122	95.29	dof zinc finger protein DOF4.6-like [Cucumis melo var. makuwa] >TYK05936.1 dof z...	[more]
XP_038906804.1	6.1e-90	70.71	dof zinc finger protein DOF4.6-like [Benincasa hispida]	[more]
KAG7016811.1	6.1e-82	64.80	Dof zinc finger protein DOF4.6, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of CsaV3_5G000300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAP8	3.2e-33	35.85	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
Q9ZPY0	1.3e-31	39.38	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]
Q84JQ8	1.8e-28	45.33	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q43385	1.2e-27	38.93	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]
Q9SXG8	4.5e-27	36.20	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]

BLAST of CsaV3_5G000300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJS3	1.4e-140	100.00	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139210 PE...	[more]
A0A1S3AV39	4.6e-136	94.62	dof zinc finger protein DOF4.6-like OS=Cucumis melo OX=3656 GN=LOC103482981 PE=4...	[more]
A0A5D3C6H0	7.7e-123	95.29	Dof zinc finger protein DOF4.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1E6H2	3.3e-81	64.26	dof zinc finger protein DOF4.6-like OS=Cucurbita moschata OX=3662 GN=LOC11143040...	[more]
A0A6J1I6C6	5.2e-79	64.43	dof zinc finger protein DOF2.5-like OS=Cucurbita maxima OX=3661 GN=LOC111471525 ...	[more]

BLAST of CsaV3_5G000300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24060.1	2.3e-34	35.85	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.1	9.5e-33	39.38	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.2	9.5e-33	39.38	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.1	8.4e-29	38.93	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.2	8.4e-29	38.93	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 58..114 e-value: 6.8E-34 score: 115.8
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 62..98
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 60..114 score: 29.338516
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 46..272
None	No IPR available	PANTHER	PTHR31992:SF124	DOF ZINC FINGER PROTEIN DOF1.8	coord: 46..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G000300.1	CsaV3_5G000300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding