CsaV3_5G000270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G000270
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein mitochondrial
Locationchr5: 121858 .. 125967 (+)
RNA-Seq ExpressionCsaV3_5G000270
SyntenyCsaV3_5G000270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCATGTTTCCAAGATAAAAGTCCTTTAACAAATGGATATACAGTGATTTATTTGTTTCAATTACAAGATTACAAGAAACACATCCCTTTCATTTATCAACTAGAAGAGGTTAATTTATAATTAAGAAAAAAAGTAGTGTTGTAAAATAGGTAAACAAACAAAGTTGAAGGAAGAAGAGACTTAGAATCAAAGTTAAGAGATTGGGAAAACATAGGCATTATCAAAAAAAATTAAGATAAAAACGGAGAAGATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATGTTGGGTTTCCCTATTTTCCTTTAATTAGAGAAAAAAAATTGTGAGATGAAGATTTTGTTGTGTTAAAAAAAGGAATTGAATTGGTCATAATAATCTAATAATAGAAATTGAGAAACGAAGAATTAAAAAAAAAAATGTGCTGTCCTGTTAGACCCATCTTCCATTGTGTTGGCTGATTTTGTTGTGTGTTTCCGCAGAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGACCGCCTCTCTCTCTTTCTCTCTGGATCTGAGGTCCTTTCCAAATTAGGTTTTCTTCAGATTTCTTGCGGGATCGGATTGCTTTTCGTTTCTTTTCTTTTCTTTGTTCTATGCTGTTTTTTTTTCCTGTCCCTTTTCCTTACTTTGGAATTGAGGATTTCGTGTTCGATCAGTTTTTCTTCGTTTGTTGATATTTATCCTTCTTTTCTGTGAATTATAAATTGAATGTTATAATAATAAAAATTAACGGAAACAAATTGTGTCTCTTATCTTTGTTGGTAGTTTCTCATCGTTGTTTGAGATTCAGACCATTCAAAATTGAGATCTATCTTTCTTTGGACTGCATGAAGCCTGAAGAAAAATTCTTAAACCAATGACCCAAATTGAATTGGGATTAAGATGGGATATGGTGTTACTGATACTTAATCTGACCATTGGATGGTTTCAAAAGTCACCCGAGTTTCTGCTTGGTGGTGGGAATATTTCACTTTTTCTATTGAAATTGTGCAGATGCAGATCTGAGCTTTCTTTCTTTCTCCCATTTCTGTTTTTTTTATAAAAAACAATTGAAAGCATGCAGTTGTTCTTCTGATTACTCATTTCCGAGCTTTGTTTCTGCCTTTTTTTTTCTTGTTCTTGGATGTTCATGAGTCATAATGCAGTTAATGATATGGGATGTCCAGGAATTGGCTAACATATTCTGAAATATGATTAGAAGCAGTTGGAAAGACAATTTTCGTACTGTTTTGTCATTCATTTTCATGGATCTCAGACACAAAACACCTCATCAATTGTTATTTTATGTCTGAAAACAGAAGGCATTGTAATATAATATTTGATCAAACAGAGAAGAGAGAGATAGAGATCTTCTCCAAACTCCAAAGCAGAATAAACAATATGTGTGTGTGTGTATCAATATTTAAACAAGCATGAATGAAGTTTGTTCTTTGGAATTTAAAAAACAAAAGTGAGAAGAATGGAAGATGTTACATGTTTCTTTGTCTGCTTCTTGGGATTTGGAATTTAGATCTCAAAGTCGTTTAATTCTTTTTTTTTTTTTCTTTTTTCTTTTTGTCAGTACAGCTAATTGATTCTAATCATTTGGCTTCTGATTCAGTGCAGGAACATGGCCACATAGCTTGGTGGTAGCAGAGAGCTTTAATAGAAATGGCAGAAGAAAACAGGGGGAACAAGGCAACTGCAAATAAACACCTCTTTAGTTCACTATTTTAAATACCTCATACATTGTAAAGAATATTTAGATTGTATTCACTCATAGAGAAGCCAAGAACAGATCTTTTTCTTTATATATATATATATCTTGTAGTCCTCTGTTTCTTAAAAGTAACTGTATAAATCATTAGAATATGATCAAATCCCTTTCAGTCACAATCTAATCATCAACATCAAATTCCTTTCCTATCTCCCTTATTTTTTAACAAGTTCCAAATGGTAAATTCTCAGAATTTGTTGGCATTATATTTGCTTCACTACCATTACAAGATGGGGAAGAGAGATAAGTTCATAAGAACTTCAAGTCTTCTCAATCTGTTTGAACTTTCAATTCTATGGTAGCTTCTATAGAACATCTTTTACAAGAGAAGGGGAGAAAAAAAGAAACATAAGCCTCCTGCACAGAGAGCTTGTGTATTTACAACAGATGGAAACTCGAAGGATGCTAAATAGCTTATAGCTTAAGCTCATAACACCTGTCCTAAAGATGATGTTGTTGAATGAAATAAGTGAGAATAATACAGCCTATATAGTATATAATCTCTGTTAGCAAAAGGGTTGCTGCAGACTTGTGTTAGTGTGTAACAATACAGCAAGAAAGCAAACAAAAAAAACTTTTTTTTTCTTCTCTTTCAAATTCAAAGACCAGCCTGGCAGGTAAAGTCTCATCAGATGAAAACGACTGACTAAGTTTGCCCCACGCTCAAATCCTCATGTCTCTCGTCGTCTTGATACGAAGCAGAAGAAGAAATGGTCAAAATATCAAATCAATAAAAAATGGCCCACAAGATATAATGGCATATAACCAATTCTTCTTCAATGAATTCAGACCACCAATCTTGATTTCCTTGACCATGTAAGAGCAGAAAAAAGCAAGAGGTAAGAGGTCCTCCAAGCCCTGTAGTAACCTGCATCGTTGAGACAACTTCTCGTATCAATGTTATTTCCCCCAATACATGAATGACTTCACATGTTTGTTACTGGCCAGCAGCAAATACTCAAATCGCAACATCATAAAGTCTATGATTAAACTGCCTAGAGGATGATTGACAAGAGAATCCAGGTAAGCTAACCTTGGCCACTAGCTGATTTGAAGCCGTTTCCTCTATAGAGAAGCTTCTTCCATCAATTGTCATTTCCATAAACTGACCCTAGAGTATCAGAAAATCTATAGATATGCTCGAGGAAATTCTGAAAACGGTAACGTATCGATTATCAGCACATATGATTGTGTTTTATTGCAGCTGGTGATAACATTGGTTGGTTGATCATCTAAAATGAGATCAGGCTTCCATCATAGCTATTACTCAGCCAGGAGGCACTAACATGTGAAACACCACAATATGAAGAAATCACTTCATGTACTTGGAAAATCCTAAAATTTCATATAGGTACAGGCAAACCATAATTGTGAAACGACCTGATTCGTCCATCCCATCCTGCCGTCACGATAACCAGACCCCATGCATGAGAACTTGATGTATTTTGGCAAGACAACTTCAGAAATTTATACCGAGATTTATGCATCATAGATGGTTTCGGTAGTAGGCTTGAGGTTGGGAGCTTCTCCTCCGGCCAAGTTGCAGATCCTTTGGGGAAGGATTCTAATAACTCTTGGCTCAAAGAGAAAAACGCAGGTGATGGAAGGGGGAAAGTTTCCGATGAGTTCCTTTGCATGCCAGGAAAATGTCTTTCACCAGCCTCTGTGTTACATCTCAAACCGTACCATGGTACTGCAATGGAAGCATTGGAGGAGAAATATTCATACGACTTAATCTTTTTCACAGGGGAAAGAACGGCCTCGTTTTTATAACTGCAGTTCCATACATATACATTAGAATCCCCACTTGCCGAGATGATATGTTTCCCATCTGAGGTAAATGATGCAGACGTCTGGTTTCCAGTATTACAAGGCCCTGAACAGAAAGGACGAAACTTGCTTATGAGGGCACATGGAAGACAGGATACGACGAACGACACCATTTGGTTTAAAAGCAAAATCTTCATAATCGAAACCAAACAACCAATCAAGCTGACTGTAACCACATCAA

mRNA sequence

ATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGA

Coding sequence (CDS)

ATGAAAAAAGGAAACAGAGAAGATTTGGATGAAATGAAGAATGAGAAAATGAAGAATGAGAAAATAAGATCCAAGGCAGGCAAGAAGAAGAAGAAGAAGAAGAAATCCCCCATACCCATGGAGAATCAAAGCACCTGTTTGTCCTATGAGAAGCTCAACGGAATGGCCACTTGGGTCGGTACCAGCGTTGCCTCCGCCTTTTTCGCCTCTCTTGAGCGATGTTCTTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAAGAGGCCCATGATCGCCCTCTCATGTACTGCACCTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCCCTTCCTCCCCCAGTCAATGATGTCGCCAATCTCCCCGTTTGA

Protein sequence

MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV*
Homology
[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: XP_011654597.1 (uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654598.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654599.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654600.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_031742147.1 uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >KAE8647797.1 hypothetical protein Csa_000040 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60
           MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120

Query: 121 ANLPV 126
           ANLPV
Sbjct: 121 ANLPV 125

[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: XP_031742148.1 (uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 9.6e-59
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60
           MKKGNREDLDEMKNEKMKNEKI SKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKGNREDLDEMKNEKMKNEKI-SKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDV 120

Query: 121 ANLPV 126
           ANLPV
Sbjct: 121 ANLPV 124

[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: XP_008437637.1 (PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437638.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437639.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437640.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 5.6e-51
Identity = 116/126 (92.06%), Postives = 117/126 (92.86%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60
           MKK NREDLD+     MKNEKIRSKAG KKKKKKKS IPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKENREDLDD-----MKNEKIRSKAG-KKKKKKKSVIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVND 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS VIRSFEPLPPPVND
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVND 120

Query: 121 VANLPV 126
           VANLPV
Sbjct: 121 VANLPV 120

[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: XP_038875439.1 (uncharacterized protein LOC120067894 [Benincasa hispida] >XP_038875440.1 uncharacterized protein LOC120067894 [Benincasa hispida] >XP_038875441.1 uncharacterized protein LOC120067894 [Benincasa hispida] >XP_038875442.1 uncharacterized protein LOC120067894 [Benincasa hispida])

HSP 1 Score: 195.7 bits (496), Expect = 2.5e-46
Identity = 109/126 (86.51%), Postives = 111/126 (88.10%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60
           MKK N E LDE     MKNEKIRSKAG    KKKKS I MENQSTCLSYEKLNG+A+WVG
Sbjct: 1   MKKENGEALDE-----MKNEKIRSKAG----KKKKSAIAMENQSTCLSYEKLNGVASWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVND 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS VIRSFEPLPPPVND
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVND 117

Query: 121 VANLPV 126
           VANLPV
Sbjct: 121 VANLPV 117

[Close]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match: KAG7016815.1 (hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41
Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 0 

Query: 23  RSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS 82
           RSKAG     K +S I MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTS
Sbjct: 3   RSKAG-----KNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTS 62

Query: 83  DDHEDPEEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV 126
           DDHEDP+EAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Sbjct: 63  DDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV 100

[Close]
BLAST of CsaV3_5G000270 vs. ExPASy TrEMBL
Match: A0A1S3AU63 (uncharacterized protein LOC103482984 OS=Cucumis melo OX=3656 GN=LOC103482984 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51
Identity = 116/126 (92.06%), Postives = 117/126 (92.86%), Query Frame = 0 

Query: 1   MKKGNREDLDEMKNEKMKNEKIRSKAGKKKKKKKKSPIPMENQSTCLSYEKLNGMATWVG 60
           MKK NREDLD+     MKNEKIRSKAG KKKKKKKS IPMENQSTCLSYEKLNGMATWVG
Sbjct: 1   MKKENREDLDD-----MKNEKIRSKAG-KKKKKKKSVIPMENQSTCLSYEKLNGMATWVG 60

Query: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS-VIRSFEPLPPPVND 120
           TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSS VIRSFEPLPPPVND
Sbjct: 61  TSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCTSTSSSVVIRSFEPLPPPVND 120

Query: 121 VANLPV 126
           VANLPV
Sbjct: 121 VANLPV 120

[Close]
BLAST of CsaV3_5G000270 vs. ExPASy TrEMBL
Match: A0A0A0KLU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139175 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 100 TSTSSSVIRSFEPLPPPVNDVANLPV 126
           TSTSSSVIRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSVIRSFEPLPPPVNDVANLPV 86

[Close]
BLAST of CsaV3_5G000270 vs. ExPASy TrEMBL
Match: A0A6J1E5Z9 (uncharacterized protein LOC111430272 OS=Cucurbita moschata OX=3662 GN=LOC111430272 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYC 60

Query: 100 TSTSSSVIRSFEPLPPPVNDVANLPV 126
           TSTSSSVIRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSVIRSFEPLPPPVNDVANLPV 86

[Close]
BLAST of CsaV3_5G000270 vs. ExPASy TrEMBL
Match: A0A6J1ID63 (uncharacterized protein LOC111471501 OS=Cucurbita maxima OX=3661 GN=LOC111471501 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 81/86 (94.19%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCL+YEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYC
Sbjct: 1   MENQSTCLTYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYC 60

Query: 100 TSTSSSVIRSFEPLPPPVNDVANLPV 126
           TSTSSS+IRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSIIRSFEPLPPPVNDVANLPV 86

[Close]
BLAST of CsaV3_5G000270 vs. ExPASy TrEMBL
Match: A0A6J1C970 (uncharacterized protein LOC111009130 OS=Momordica charantia OX=3673 GN=LOC111009130 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 40  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 99
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 100 TSTSSS-VIRSFEPLPPPVNDVANLPV 126
            STSSS VIRSFEPLPPPVNDVANLPV
Sbjct: 61  NSTSSSVVIRSFEPLPPPVNDVANLPV 87

[Close]
BLAST of CsaV3_5G000270 vs. TAIR 10
Match: AT4G10810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-13
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 42 NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPL 97
          N ST  S EKL+  A+WV T+V SAFFASLERCSC+NLSTSDD ++ EE+H+RPL
Sbjct: 16 NLSTA-SLEKLDQAASWVSTTVISAFFASLERCSCVNLSTSDDDDEGEESHNRPL 69

[Close]
BLAST of CsaV3_5G000270 vs. TAIR 10
Match: AT4G24026.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 42 NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS--DDHEDPEEAHDRPL 97
          N ST  S EK++  A+W+  +V SAFF SLERC+C+NLSTS  DD +D +E+H RPL
Sbjct: 10 NVSTTTSMEKIDHAASWISATVISAFFTSLERCACVNLSTSHDDDDDDDDESHHRPL 66

The following BLAST results are available for this feature:
BLAST of CsaV3_5G000270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654597.11.3e-60100.00uncharacterized protein LOC101207351 isoform X1 [Cucumis sativus] >XP_011654598.... [more]
XP_031742148.19.6e-5999.20uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus][more]
XP_008437637.15.6e-5192.06PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437638.1 P... [more]
XP_038875439.12.5e-4686.51uncharacterized protein LOC120067894 [Benincasa hispida] >XP_038875440.1 unchara... [more]
KAG7016815.13.1e-4187.38hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CsaV3_5G000270 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G000270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AU632.7e-5192.06uncharacterized protein LOC103482984 OS=Cucumis melo OX=3656 GN=LOC103482984 PE=... [more]
A0A0A0KLU31.2e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139175 PE=4 SV=1[more]
A0A6J1E5Z93.7e-4096.51uncharacterized protein LOC111430272 OS=Cucurbita moschata OX=3662 GN=LOC1114302... [more]
A0A6J1ID631.1e-3994.19uncharacterized protein LOC111471501 OS=Cucurbita maxima OX=3661 GN=LOC111471501... [more]
A0A6J1C9701.1e-3997.70uncharacterized protein LOC111009130 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
BLAST of CsaV3_5G000270 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G10810.11.0e-1367.27unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G24026.11.2e-1156.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR34061PROTEIN, PUTATIVE-RELATEDcoord: 34..102
NoneNo IPR availablePANTHERPTHR34061:SF19OS10G0502100 PROTEINcoord: 34..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G000270.1CsaV3_5G000270.1mRNA