CsaV3_4G037830 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G037830
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 26406078 .. 26406488 (-)
RNA-Seq ExpressionCsaV3_4G037830
SyntenyCsaV3_4G037830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGTCGTGGATTTGTATTTAACAGAACAGACTAATGGCTGTAGTCGGAACTTTTCATCATTTTGGTTGGCGGCTGTGTTCACTGTTGGCCGCTTGGTGGTGAATCTCGAACCCTTTATTACATTGGATTATATTTTCGTTTCACCAGTCGGTCACCGCGTGCCACTTTCATTCATTGTAAGCTCTTTCAGGGTAAAAAAATCTTTTATAAATAATTCTTTAAATGTGTCTGGACTTGGACCGGGACTTGGACCGGGACCTGGACCTGGACCTGGACCACACCATTTCTTAATTGATCCAGGTATGGTAAAATTTCCTCGTCAGTTCCACATTTTACATTCTCCACATGGAAAAACACTACCACTTTTGCATGTATATTTTCTAGTTCACGGTTGGTTCCAAAATTAG

mRNA sequence

ATGTGTGTCGTGGATTTGTATTTAACAGAACAGACTAATGGCTGTAGTCGGAACTTTTCATCATTTTGGTTGGCGGCTGTGTTCACTGTTGGCCGCTTGGTGGTGAATCTCGAACCCTTTATTACATTGGATTATATTTTCGTTTCACCAGTCGGTCACCGCGTGCCACTTTCATTCATTGTAAGCTCTTTCAGGGTAAAAAAATCTTTTATAAATAATTCTTTAAATGTGTCTGGACTTGGACCGGGACTTGGACCGGGACCTGGACCTGGACCTGGACCACACCATTTCTTAATTGATCCAGGTATGGTAAAATTTCCTCGTCAGTTCCACATTTTACATTCTCCACATGGAAAAACACTACCACTTTTGCATGTATATTTTCTAGTTCACGGTTGGTTCCAAAATTAG

Coding sequence (CDS)

ATGTGTGTCGTGGATTTGTATTTAACAGAACAGACTAATGGCTGTAGTCGGAACTTTTCATCATTTTGGTTGGCGGCTGTGTTCACTGTTGGCCGCTTGGTGGTGAATCTCGAACCCTTTATTACATTGGATTATATTTTCGTTTCACCAGTCGGTCACCGCGTGCCACTTTCATTCATTGTAAGCTCTTTCAGGGTAAAAAAATCTTTTATAAATAATTCTTTAAATGTGTCTGGACTTGGACCGGGACTTGGACCGGGACCTGGACCTGGACCTGGACCACACCATTTCTTAATTGATCCAGGTATGGTAAAATTTCCTCGTCAGTTCCACATTTTACATTCTCCACATGGAAAAACACTACCACTTTTGCATGTATATTTTCTAGTTCACGGTTGGTTCCAAAATTAG

Protein sequence

MCVVDLYLTEQTNGCSRNFSSFWLAAVFTVGRLVVNLEPFITLDYIFVSPVGHRVPLSFIVSSFRVKKSFINNSLNVSGLGPGLGPGPGPGPGPHHFLIDPGMVKFPRQFHILHSPHGKTLPLLHVYFLVHGWFQN*
Homology
[Close]
BLAST of CsaV3_4G037830 vs. NCBI nr
Match: KGN55560.1 (hypothetical protein Csa_011976 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 1.8e-74
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MCVVDLYLTEQTNGCSRNFSSFWLAAVFTVGRLVVNLEPFITLDYIFVSPVGHRVPLSFI 60
           MCVVDLYLTEQTNGCSRNFSSFWLAAVFTVGRLVVNLEPFITLDYIFVSPVGHRVPLSFI
Sbjct: 1   MCVVDLYLTEQTNGCSRNFSSFWLAAVFTVGRLVVNLEPFITLDYIFVSPVGHRVPLSFI 60

Query: 61  VSSFRVKKSFINNSLNVSGLGPGLGPGPGPGPGPHHFLIDPGMVKFPRQFHILHSPHGKT 120
           VSSFRVKKSFINNSLNVSGLGPGLGPGPGPGPGPHHFLIDPGMVKFPRQFHILHSPHGKT
Sbjct: 61  VSSFRVKKSFINNSLNVSGLGPGLGPGPGPGPGPHHFLIDPGMVKFPRQFHILHSPHGKT 120

Query: 121 LPLLHVYFLVHGWFQN 137
           LPLLHVYFLVHGWFQN
Sbjct: 121 LPLLHVYFLVHGWFQN 136

[Close]
BLAST of CsaV3_4G037830 vs. ExPASy TrEMBL
Match: A0A0A0L0V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665400 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 8.6e-75
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MCVVDLYLTEQTNGCSRNFSSFWLAAVFTVGRLVVNLEPFITLDYIFVSPVGHRVPLSFI 60
           MCVVDLYLTEQTNGCSRNFSSFWLAAVFTVGRLVVNLEPFITLDYIFVSPVGHRVPLSFI
Sbjct: 1   MCVVDLYLTEQTNGCSRNFSSFWLAAVFTVGRLVVNLEPFITLDYIFVSPVGHRVPLSFI 60

Query: 61  VSSFRVKKSFINNSLNVSGLGPGLGPGPGPGPGPHHFLIDPGMVKFPRQFHILHSPHGKT 120
           VSSFRVKKSFINNSLNVSGLGPGLGPGPGPGPGPHHFLIDPGMVKFPRQFHILHSPHGKT
Sbjct: 61  VSSFRVKKSFINNSLNVSGLGPGLGPGPGPGPGPHHFLIDPGMVKFPRQFHILHSPHGKT 120

Query: 121 LPLLHVYFLVHGWFQN 137
           LPLLHVYFLVHGWFQN
Sbjct: 121 LPLLHVYFLVHGWFQN 136

The following BLAST results are available for this feature:
BLAST of CsaV3_4G037830 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55560.11.8e-74100.00hypothetical protein Csa_011976 [Cucumis sativus][more]
BLAST of CsaV3_4G037830 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G037830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0V18.6e-75100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665400 PE=4 SV=1[more]
BLAST of CsaV3_4G037830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G037830.1CsaV3_4G037830.1mRNA